Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 2.1e-130 469.2 255 100.0
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 1.6e-119 433.0 255 91.8
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 3.8e-116 421.8 253 88.9
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 1.9e-115 419.5 253 88.5
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 2.7e-114 415.6 255 87.8
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 8.8e-113 410.6 253 87.4
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 5.3e-110 401.4 268 82.5
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 1.2e-109 400.2 278 79.9
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 1.3e-108 396.7 278 79.5
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 3.0e-97 359.0 304 69.4
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 1.5e-96 356.7 283 71.0
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 1.1e-86 323.9 251 68.9
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.0e-80 303.1 175 93.7
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 5.0e-68 261.9 282 53.5
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 3.6e-66 255.8 281 53.0
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 6.1e-66 255.0 282 52.1
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 1.4e-65 253.8 282 51.8
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 5.2e-65 251.9 282 51.8
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 2.0e-64 250.0 279 52.7
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 1.3e-63 247.3 282 51.4
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 7.0e-62 241.5 290 49.7
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 9.2e-62 241.1 266 53.8
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 1.3e-60 237.3 280 51.4
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 1.7e-60 236.9 282 49.6
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 3.9e-60 235.7 283 50.2
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 5.0e-60 235.3 270 51.5
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 8.6e-60 234.6 283 49.1
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 1.5e-59 233.8 263 50.2
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 7.3e-59 231.5 258 53.1
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 4.0e-57 225.7 281 48.8
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 3.4e-56 222.6 261 49.4
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 7.5e-56 221.5 256 49.6
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 7.5e-56 221.5 269 50.2
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 2.2e-55 219.9 271 45.8
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 4.9e-55 218.8 278 47.5
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 5.4e-54 215.3 324 42.6
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 9.2e-54 214.5 282 47.5
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.6e-53 213.8 273 46.5
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 1.6e-53 213.8 281 44.5
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 2.1e-53 213.4 271 48.0
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 2.7e-53 213.0 287 44.9
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 4.6e-53 212.2 281 44.8
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 1.7e-52 210.3 282 47.5
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 1.7e-52 210.3 280 44.6
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 2.3e-52 209.9 280 44.6
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 1.1e-51 207.6 288 43.8
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 2.5e-51 206.5 269 49.4
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 3.3e-51 206.1 286 43.4
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 5.6e-51 205.3 266 46.2
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 1.2e-50 204.1 270 45.2
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 2.8e-50 203.0 282 46.1
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 4.7e-50 202.2 259 47.5
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 1.8e-49 200.3 280 44.6
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 2.3e-49 199.9 333 39.0
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 2.3e-49 199.9 272 45.2
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 3.1e-49 199.5 315 42.9
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 4.4e-48 195.7 265 46.4
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 1.3e-47 194.1 272 44.9
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.7e-47 193.7 270 45.2
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 2.9e-47 193.0 253 45.8
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 4.9e-47 192.2 111 91.9
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 6.4e-47 191.8 277 43.3
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 5.4e-46 188.7 270 44.8
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 9.2e-46 188.0 280 43.2
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 9.2e-46 188.0 280 43.2
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 1.0e-44 184.5 253 44.7
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 2.4e-41 173.3 286 41.3
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 4.0e-41 172.6 271 43.5
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 1.2e-40 171.0 151 62.9
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 2.6e-40 169.9 261 41.4
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 3.4e-40 169.5 353 37.1
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 7.8e-37 158.3 251 41.4
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 7.8e-37 158.3 254 40.2
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 1.7e-36 157.1 278 39.2
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 2.3e-36 156.8 292 38.7
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 2.5e-35 153.3 264 41.3
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 7.3e-35 151.8 199 48.7
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 1.3e-34 151.0 235 38.7
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.3e-34 151.0 222 44.6
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 2.4e-33 146.7 198 46.0
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 9.9e-32 141.4 137 58.4
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 1.3e-31 141.0 224 41.1
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.4e-30 137.5 343 31.8
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 4.2e-30 136.0 251 34.7
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 2.1e-29 133.7 224 38.4
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 2.1e-29 133.7 234 40.6
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 4.6e-29 132.5 123 59.3
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 3.9e-28 129.4 128 57.0
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 6.6e-28 128.6 270 34.8
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 8.7e-28 128.3 142 54.2
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.6e-26 124.0 209 41.1
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 2.1e-26 123.6 128 52.3
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 8.1e-26 121.7 251 37.1
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 7.6e-24 115.2 108 54.6
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 6.4e-23 112.1 165 41.8
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 1.1e-22 111.3 120 46.7
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.1e-22 111.3 250 34.0
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 2.4e-22 110.2 161 44.7
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 6.0e-21 105.5 108 47.2
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 6.0e-21 105.5 81 67.9
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 6.0e-21 105.5 234 34.2
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.3e-20 104.4 254 31.5
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 2.3e-20 103.6 201 36.3
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 1.5e-19 100.9 130 46.2
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 8.1e-18 95.1 108 49.1
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 1.5e-16 90.9 191 33.5
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 2.0e-16 90.5 152 42.1
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.3e-15 87.8 98 43.9
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 6.5e-15 85.5 95 49.5
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 2.5e-14 83.6 85 50.6
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 1.1e-11 74.7 56 62.5
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 4.3e-11 72.8 80 47.5
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 2.1e-10 70.5 70 52.9
SMO137G0232 Selaginella moellendorffii HOM05D006511 ORTHO05D007567 4.8e-10 69.3 128 35.2
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 1.8e-09 67.4 48 68.8
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 4.5e-08 62.8 63 54.0
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 2.2e-07 60.5 56 55.4
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 3.2e-06 56.6 87 44.8
Duzib116G0864 Durio zibethinus HOM05D006511 ORTHO05D007567 9.3e-06 55.1 109 34.9


User provided reference genes

Program Settings