Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G32585 Arabidopsis thaliana HOM05D013487 ORTHO05D015348 3.3e-124 448.4 221 100.0
AL1G46850 Arabidopsis lyrata HOM05D013487 ORTHO05D015348 7.6e-97 357.5 223 84.8
Thhalv10009422m.g Eutrema salsugineum HOM05D013487 ORTHO05D015348 1.2e-57 227.3 215 59.1
Sp1g28320 Schrenkiella parvula HOM05D013487 ORTHO05D015348 5.9e-57 224.9 214 60.3
CARHR032050 Cardamine hirsuta HOM05D013487 ORTHO05D015348 7.0e-50 201.4 179 64.2
BcaB04g17956 Brassica carinata HOM05D013487 ORTHO05D015348 3.4e-44 182.6 215 53.5
Carub.0001s3099 Capsella rubella HOM05D013487 ORTHO05D015348 1.8e-42 176.8 217 57.1
BraA08t32908Z Brassica rapa HOM05D013487 ORTHO05D015348 4.5e-41 172.2 232 47.8
A08p09060 Brassica napus HOM05D013487 ORTHO05D015348 1.5e-39 167.2 227 47.6
BolC8t47942H Brassica oleracea HOM05D013487 ORTHO05D015348 4.3e-39 165.6 229 46.7
BcaC07g37591 Brassica carinata HOM05D013487 ORTHO05D015348 9.5e-39 164.5 229 46.3
CARHR032040 Cardamine hirsuta HOM05D013487 ORTHO05D015348 3.7e-35 152.5 145 57.2
THA.LOC104814442 Tarenaya hassleriana HOM05D002068 ORTHO05D002029 1.9e-10 70.5 330 30.6
TWI81G0802 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 1.9e-10 70.5 302 29.8
Ca_06078_v3 Cicer arietinum L. HOM05D002068 ORTHO05D002029 9.2e-10 68.2 288 28.1
Hma1.2p1_0303F.1_g119120 Hydrangea macrophylla HOM05D002068 ORTHO05D002029 5.1e-08 62.4 258 26.7
Actinidia03376 Actinidia chinensis HOM05D002068 ORTHO05D002029 8.6e-08 61.6 269 27.5
Prupe.5G036600 Prunus persica HOM05D002068 ORTHO05D002029 1.9e-07 60.5 277 29.2
CSS0014279 Camellia sinensis var. sinensis HOM05D002068 ORTHO05D002029 4.3e-07 59.3 258 27.5
Manes.01G233900 Manihot esculenta HOM05D002068 ORTHO05D002029 4.3e-07 59.3 104 47.1
Psat2g136560 Pisum sativum HOM05D002068 ORTHO05D002029 4.3e-07 59.3 284 27.8
Cfa012439 Carpinus fangiana HOM05D002068 ORTHO05D002029 5.6e-07 58.9 280 28.6
Lalb_Chr05g0216091 Lupinus albus HOM05D002068 ORTHO05D002029 5.6e-07 58.9 225 31.1
CANSAT21G2072 Cannabis sativa HOM05D002068 ORTHO05D002029 7.3e-07 58.5 111 41.4
Aa31LG2G13360 Aethionema arabicum HOM05D002068 ORTHO05D002029 9.6e-07 58.2 187 33.7
vmacro00330 Vaccinium macrocarpon HOM05D002068 ORTHO05D002029 9.6e-07 58.2 261 28.0
Atru.chr6.1710 Acer truncatum HOM05D002068 ORTHO05D002029 1.6e-06 57.4 104 41.3
Dinv25215 Davidia involucrata HOM05D002068 ORTHO05D002029 1.6e-06 57.4 264 27.3
Duzib084G1376 Durio zibethinus HOM05D002068 ORTHO05D002029 1.6e-06 57.4 82 47.6
Sabra01G0111200 Salix brachista HOM05D002068 ORTHO05D002029 3.6e-06 56.2 118 38.1
GSVIVG01013160001 Vitis vinifera HOM05D002068 ORTHO05D002029 3.6e-06 56.2 191 31.9
TWI60G1070 Tripterygium wilfordii HOM05D002068 ORTHO05D002029 4.7e-06 55.8 213 31.5
Eucgr.D02200 Eucalyptus grandis HOM05D002068 ORTHO05D002029 6.2e-06 55.5 243 26.7
TAR375G0554 Trochodendron aralioides HOM05D002068 ORTHO05D002029 6.2e-06 55.5 267 28.8
Manes.05G009900 Manihot esculenta HOM05D002068 ORTHO05D002029 8.1e-06 55.1 234 30.3
Oeu020141.1 Olea europaea HOM05D002068 ORTHO05D002029 8.1e-06 55.1 105 39.0


User provided reference genes

Program Settings