Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 1.5e-57 226.1 126 100.0
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 2.3e-53 212.2 123 95.1
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 2.9e-53 211.8 123 94.3
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 4.3e-52 208.0 121 95.0
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 1.2e-51 206.5 121 95.0
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 6.8e-50 200.7 125 88.8
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 1.5e-49 199.5 124 90.3
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 1.5e-49 199.5 124 90.3
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 2.0e-49 199.1 121 92.6
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 4.4e-49 198.0 124 89.5
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 5.8e-49 197.6 124 89.5
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 5.8e-49 197.6 124 89.5
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 3.2e-47 191.8 123 86.2
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 4.6e-46 188.0 121 83.5
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.3e-45 185.7 123 82.1
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 3.3e-36 155.2 123 71.5
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 6.0e-30 134.4 125 68.8
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 8.6e-29 130.6 117 65.0
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 1.1e-28 130.2 119 63.9
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.9e-28 129.4 108 67.6
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 5.6e-28 127.9 115 66.1
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 7.3e-28 127.5 108 68.5
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 1.2e-27 126.7 119 72.3
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 1.2e-27 126.7 119 72.3
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 1.2e-27 126.7 109 67.9
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.6e-27 126.3 116 63.8
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 1.6e-27 126.3 113 63.7
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 2.1e-27 125.9 117 63.2
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 2.1e-27 125.9 106 67.9
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 2.1e-27 125.9 106 67.9
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 2.1e-27 125.9 112 66.1
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 3.6e-27 125.2 121 62.0
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 8.1e-27 124.0 122 62.3
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 1.1e-26 123.6 125 60.8
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 1.4e-26 123.2 103 68.0
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 1.4e-26 123.2 103 68.0
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.4e-26 123.2 105 64.8
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 2.4e-26 122.5 106 66.0
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 3.1e-26 122.1 122 60.7
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 4.0e-26 121.7 99 68.7
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 4.0e-26 121.7 107 63.6
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 4.0e-26 121.7 108 65.7
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 5.2e-26 121.3 103 68.0
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 8.9e-26 120.6 118 61.0
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.2e-25 120.2 116 58.6
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 1.5e-25 119.8 118 59.3
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.5e-25 119.8 122 59.8
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 3.4e-25 118.6 116 62.9
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 4.4e-25 118.2 119 59.7
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 4.4e-25 118.2 97 70.1
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 5.8e-25 117.9 97 68.0
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 7.6e-25 117.5 112 59.8
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 9.9e-25 117.1 124 58.1
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 1.3e-24 116.7 135 55.6
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 1.7e-24 116.3 112 60.7
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 1.7e-24 116.3 125 58.4
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.2e-24 115.9 129 56.6
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 2.9e-24 115.5 120 57.5
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 2.9e-24 115.5 106 62.3
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 4.9e-24 114.8 113 58.4
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 6.4e-24 114.4 95 69.5
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 6.4e-24 114.4 107 63.6
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 1.1e-23 113.6 84 84.5
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 1.1e-23 113.6 95 68.4
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.4e-23 113.2 125 57.6
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 1.9e-23 112.8 111 58.6
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 2.4e-23 112.5 120 56.7
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 3.2e-23 112.1 114 57.9
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 4.2e-23 111.7 125 56.8
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 4.2e-23 111.7 109 60.6
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 4.2e-23 111.7 95 66.3
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 9.3e-23 110.5 98 66.3
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 1.2e-22 110.2 129 56.6
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 1.6e-22 109.8 116 56.0
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 1.6e-22 109.8 116 56.0
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 2.1e-22 109.4 104 59.6
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 2.1e-22 109.4 95 64.2
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 7.8e-22 107.5 105 60.0
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 1.0e-21 107.1 111 55.0
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 1.7e-21 106.3 104 56.7
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 5.1e-21 104.8 150 48.0
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 1.1e-20 103.6 113 54.9
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 3.3e-20 102.1 97 60.8
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 5.6e-20 101.3 159 45.9
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 2.1e-19 99.4 112 52.7
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 3.6e-19 98.6 129 49.6
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 1.4e-18 96.7 114 55.3
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 1.5e-17 93.2 143 46.2
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 2.6e-17 92.4 89 62.9
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 8.4e-16 87.4 112 49.1
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 4.2e-15 85.1 96 54.2
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 5.4e-15 84.7 80 61.2
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 7.1e-15 84.3 90 55.6
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 2.1e-14 82.8 76 60.5
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 4.6e-14 81.6 72 62.5
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 6.0e-14 81.3 75 61.3
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 2.3e-13 79.3 74 58.1
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 3.0e-13 79.0 74 60.8
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 6.6e-13 77.8 84 56.0
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 9.6e-12 73.9 65 61.5
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 1.3e-11 73.6 71 64.8
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 2.4e-10 69.3 74 54.1
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 3.1e-10 68.9 93 44.1
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 3.1e-10 68.9 70 55.7
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 3.1e-10 68.9 68 50.0
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 5.3e-10 68.2 66 54.5
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 7.6e-09 64.3 94 41.5
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 2.4e-07 59.3 42 73.8
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 7.1e-07 57.8 41 70.7
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 7.1e-07 57.8 49 67.3
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 2.1e-06 56.2 51 54.9
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 3.5e-06 55.5 46 65.2
Sed0003750 Sechium edule HOM05D006869 ORTHO05D008641 6.0e-06 54.7 55 61.8


User provided reference genes

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