Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G31163 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.7e-106 388.7 192 100.0
AL1G45270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-24 117.5 180 44.4
AL1G45300 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-23 113.6 208 38.9
AL1G45280 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.3e-20 103.2 176 42.0
Carub.0001s2930 Capsella rubella HOM05D000171 ORTHO05D000101 1.4e-17 94.0 176 38.1
AL1G45290 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.9e-15 85.5 135 43.7
AL1G45520 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.1e-14 82.8 150 38.0
AL1G45240 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.6e-13 80.5 178 33.1
Carub.0001s2944 Capsella rubella HOM05D000171 ORTHO05D000101 2.0e-13 80.1 188 33.5
AL1G45510 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.5e-13 79.3 75 56.0
Carub.0001s2932 Capsella rubella HOM05D000171 ORTHO05D000101 4.5e-13 79.0 63 65.1
CARHR213730 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.0e-12 77.8 172 33.7
AL1G45230 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.8e-12 75.9 78 51.3
AL1G45580 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-11 74.3 95 45.3
AL756U10010 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-11 73.9 75 53.3
AL1G45470 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.5e-11 73.2 145 37.2
AL1G45610 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.6e-11 72.0 81 49.4
AL4G14930 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.3e-11 71.6 85 50.6
CARHR031540 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.3e-11 71.6 162 31.5
AT1G30930 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.2e-10 70.9 146 39.0
Carub.0001s2947 Capsella rubella HOM05D000171 ORTHO05D000101 2.8e-10 69.7 86 50.0
AL4G14910 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.6e-10 69.3 81 49.4
AL1G45350 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.8e-09 67.0 71 60.6
AL2G25510 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.8e-09 67.0 80 47.5
Carub.0001s2943 Capsella rubella HOM05D000171 ORTHO05D000101 6.8e-09 65.1 78 48.7
AL1G45340 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 1.2e-08 64.3 71 52.1
Thhalv10009341m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.5e-08 63.9 64 59.4
Carub.0001s3824 Capsella rubella HOM05D000171 ORTHO05D000101 2.0e-08 63.5 73 47.9
AT1G30920 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.4e-08 62.8 63 52.4
AT5G38810 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.4e-08 62.8 113 37.2
AT5G42430 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.4e-08 62.8 82 47.6
Thhalv10009451m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.4e-08 62.8 64 59.4
CARHR265400 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.8e-08 62.0 61 54.1
Thhalv10009326m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.8e-08 62.0 66 56.1
C01p15520 Brassica napus HOM05D000171 ORTHO05D000101 7.5e-08 61.6 161 30.4
BolC1t01504H Brassica oleracea HOM05D000171 ORTHO05D000101 7.5e-08 61.6 161 30.4
BcaNung02780 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-07 60.5 161 31.1
Thhalv10009377m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.2e-07 60.1 170 34.1
BcaC07g37260 Brassica carinata HOM05D000171 ORTHO05D000101 4.9e-07 58.9 74 47.3
Carub.0001s3050 Capsella rubella HOM05D000171 ORTHO05D000101 6.4e-07 58.5 171 31.6
Carub.0001s3228 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-06 57.8 65 52.3
AL1G45550 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.4e-06 57.4 55 56.4
CARHR265180 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.4e-06 57.4 74 43.2
Thhalv10003077m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.4e-06 57.4 154 31.2
AT1G31080 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.9e-06 57.0 70 50.0
AL1G53500 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.2e-06 56.2 89 42.7
A09p51160 Brassica napus HOM05D000171 ORTHO05D000101 3.2e-06 56.2 154 31.8
C08p06400 Brassica napus HOM05D000171 ORTHO05D000101 3.2e-06 56.2 74 44.6
BolC8t47486H Brassica oleracea HOM05D000171 ORTHO05D000101 3.2e-06 56.2 74 44.6
BraA09t40560Z Brassica rapa HOM05D000171 ORTHO05D000101 3.2e-06 56.2 154 31.8
CARHR149520 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.2e-06 56.2 70 52.9
Thhalv10009572m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.2e-06 56.2 62 54.8
A01p12880 Brassica napus HOM05D000171 ORTHO05D000101 4.1e-06 55.8 161 31.7
C06p01870 Brassica napus HOM05D000171 ORTHO05D000101 4.1e-06 55.8 74 45.9
BraA01t01232Z Brassica rapa HOM05D000171 ORTHO05D000101 4.1e-06 55.8 161 31.7
Carub.0001s2933 Capsella rubella HOM05D000171 ORTHO05D000101 4.1e-06 55.8 180 28.3
Carub.0001s3226 Capsella rubella HOM05D000171 ORTHO05D000101 4.1e-06 55.8 68 47.1
Aa31LG6G10550 Aethionema arabicum HOM05D000171 ORTHO05D000101 5.4e-06 55.5 62 53.2
AL1G45560 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.4e-06 55.5 82 48.8
AT1G30925 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 5.4e-06 55.5 59 49.2
BcaC08g42944 Brassica carinata HOM05D000171 ORTHO05D000101 5.4e-06 55.5 74 45.9
C03p55070 Brassica napus HOM05D000171 ORTHO05D000101 5.4e-06 55.5 74 44.6
BolC3t17782H Brassica oleracea HOM05D000171 ORTHO05D000101 5.4e-06 55.5 74 44.6
BolC6t35315H Brassica oleracea HOM05D000171 ORTHO05D000101 5.4e-06 55.5 74 45.9
CARHR148260 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.4e-06 55.5 60 46.7
A10p06460 Brassica napus HOM05D000171 ORTHO05D000101 7.0e-06 55.1 74 43.2
Thhalv10009314m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.0e-06 55.1 79 45.6
Thhalv10009437m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.0e-06 55.1 80 43.8
AL1G46280 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.2e-06 54.7 176 33.0
AL1G53520 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.2e-06 54.7 74 44.6
BcaC07g37220 Brassica carinata HOM05D000171 ORTHO05D000101 9.2e-06 54.7 74 44.6
Carub.0001s2948 Capsella rubella HOM05D000171 ORTHO05D000101 9.2e-06 54.7 69 47.8
Thhalv10009740m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 9.2e-06 54.7 62 53.2
Thhalv10012070m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 9.2e-06 54.7 75 46.7
Thhalv10012217m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 9.2e-06 54.7 134 34.3


User provided reference genes

Program Settings