Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G31095 Arabidopsis thaliana HOM05D003577 ORTHO05D004663 5.8e-32 140.2 67 100.0
AL5G17860 Arabidopsis lyrata HOM05D003577 ORTHO05D004663 1.0e-07 59.7 40 70.0
AL7G37440 Arabidopsis lyrata HOM05D003577 ORTHO05D004663 1.1e-06 56.2 40 67.5
AT4G17260 Arabidopsis thaliana HOM05D003577 ORTHO05D004663 1.1e-06 56.2 40 67.5
CARHR223890 Cardamine hirsuta HOM05D003577 ORTHO05D004663 1.4e-06 55.8 40 67.5
Aa31LG6G2900 Aethionema arabicum HOM05D003577 ORTHO05D004663 1.9e-06 55.5 40 65.0
BcaNung00105 Brassica carinata HOM05D003577 ORTHO05D004663 1.9e-06 55.5 40 65.0
Carub.0007s2413 Capsella rubella HOM05D003577 ORTHO05D004663 1.9e-06 55.5 40 65.0
Sp7g16910 Schrenkiella parvula HOM05D003577 ORTHO05D004663 1.9e-06 55.5 40 65.0
Thhalv10025435m.g Eutrema salsugineum HOM05D003577 ORTHO05D004663 2.5e-06 55.1 40 65.0
Thhalv10025596m.g Eutrema salsugineum HOM05D003577 ORTHO05D004663 2.5e-06 55.1 40 65.0
BcaC06g33546 Brassica carinata HOM05D003577 ORTHO05D004663 4.2e-06 54.3 40 62.5
BcaNung03469 Brassica carinata HOM05D003577 ORTHO05D004663 4.2e-06 54.3 40 62.5
C07p48690 Brassica napus HOM05D003577 ORTHO05D004663 4.2e-06 54.3 40 62.5
BolC7t45376H Brassica oleracea HOM05D003577 ORTHO05D004663 4.2e-06 54.3 40 62.5
BraA03t14127Z Brassica rapa HOM05D003577 ORTHO05D004663 4.2e-06 54.3 40 62.5
Hma1.2p1_0753F.1_g212980 Hydrangea macrophylla HOM05D003577 ORTHO05D004663 4.2e-06 54.3 40 65.0
THA.LOC104813333 Tarenaya hassleriana HOM05D003577 ORTHO05D004663 4.2e-06 54.3 40 62.5
ECA233G5538 Erigeron canadensis HOM05D003577 ORTHO05D004663 5.5e-06 53.9 42 59.5
RcHm_v2.0_Chr4g0406091 Rosa chinensis HOM05D003577 ORTHO05D004663 5.5e-06 53.9 40 65.0
GSVIVG01001303001 Vitis vinifera HOM05D003577 ORTHO05D004663 5.5e-06 53.9 40 62.5
BcaC09g50459 Brassica carinata HOM05D003577 ORTHO05D004663 7.1e-06 53.5 40 62.5
A01p20100 Brassica napus HOM05D003577 ORTHO05D004663 7.1e-06 53.5 40 62.5
C01p25250 Brassica napus HOM05D003577 ORTHO05D004663 7.1e-06 53.5 40 62.5
BolC1t02475H Brassica oleracea HOM05D003577 ORTHO05D004663 7.1e-06 53.5 40 62.5
BraA01t01934Z Brassica rapa HOM05D003577 ORTHO05D004663 7.1e-06 53.5 40 62.5
Cfa012750 Carpinus fangiana HOM05D003577 ORTHO05D004663 7.1e-06 53.5 40 65.0
Haze_07878 Corylus avellana HOM05D003577 ORTHO05D004663 7.1e-06 53.5 40 65.0
THA.LOC104798465 Tarenaya hassleriana HOM05D003577 ORTHO05D004663 7.1e-06 53.5 40 62.5


User provided reference genes

Program Settings