Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G30970 Arabidopsis thaliana HOM05D004432 ORTHO05D005427 4.2e-201 704.5 368 100.0
Carub.0001s2938 Capsella rubella HOM05D004432 ORTHO05D005427 9.8e-182 640.2 368 92.1
AL1G45380 Arabidopsis lyrata HOM05D004432 ORTHO05D005427 1.9e-177 625.9 347 90.8
BcaB07g32757 Brassica carinata HOM05D004432 ORTHO05D005427 2.5e-153 545.8 370 77.8
Thhalv10008022m.g Eutrema salsugineum HOM05D004432 ORTHO05D005427 3.1e-151 538.9 370 83.0
Aa31LG6G12370 Aethionema arabicum HOM05D004432 ORTHO05D005427 3.9e-146 521.9 347 78.4
BcaB04g18194 Brassica carinata HOM05D004432 ORTHO05D005427 1.9e-145 519.6 369 75.9
Sp1g26830 Schrenkiella parvula HOM05D004432 ORTHO05D005427 8.4e-141 504.2 349 78.8
BcaC07g37789 Brassica carinata HOM05D004432 ORTHO05D005427 1.3e-138 496.9 377 72.9
BraA09t39051Z Brassica rapa HOM05D004432 ORTHO05D005427 1.4e-135 486.9 369 73.4
BolC5t31752H Brassica oleracea HOM05D004432 ORTHO05D005427 2.2e-133 479.6 369 71.8
BcaC05g27130 Brassica carinata HOM05D004432 ORTHO05D005427 3.0e-130 469.2 369 70.7
C05p30150 Brassica napus HOM05D004432 ORTHO05D005427 3.0e-130 469.2 369 70.7
Thecc.02G004200 Theobroma cacao HOM05D004432 ORTHO05D005427 6.7e-130 468.0 375 68.0
A08p10850 Brassica napus HOM05D004432 ORTHO05D005427 3.7e-128 462.2 349 71.9
BolC8t48181H Brassica oleracea HOM05D004432 ORTHO05D005427 4.0e-127 458.8 356 71.1
MD05G1247000 Malus domestica HOM05D004432 ORTHO05D005427 7.1e-124 448.0 373 67.6
MD10G1227600 Malus domestica HOM05D004432 ORTHO05D005427 1.0e-122 444.1 373 66.5
A09p35240 Brassica napus HOM05D004432 ORTHO05D005427 5.1e-122 441.8 348 70.7
COL.COLO4_18029 Corchorus olitorius HOM05D004432 ORTHO05D003521 3.3e-121 439.1 372 65.3
FvH4_3g12940 Fragaria vesca HOM05D004432 ORTHO05D005427 1.5e-118 430.3 382 65.4
FAN25G3492 Fragaria x ananassa HOM05D004432 ORTHO05D005427 3.4e-118 429.1 382 64.9
Gohir.D12G047900 Gossypium hirsutum HOM05D004432 ORTHO05D005427 3.4e-118 429.1 376 64.6
FAN16G2829 Fragaria x ananassa HOM05D004432 ORTHO05D005427 7.6e-118 427.9 382 65.2
CsaV3_6G052770 Cucumis sativus L. HOM05D004432 ORTHO05D005427 3.8e-117 425.6 381 63.5
Gohir.A12G049500 Gossypium hirsutum HOM05D004432 ORTHO05D005427 3.8e-117 425.6 376 64.4
RcHm_v2.0_Chr5g0021051 Rosa chinensis HOM05D004432 ORTHO05D005427 6.5e-117 424.9 383 65.5
FAN21G3105 Fragaria x ananassa HOM05D004432 ORTHO05D005427 8.5e-117 424.5 382 64.4
BraA08t33081Z Brassica rapa HOM05D004432 ORTHO05D005427 4.2e-116 422.2 349 70.5
Sed0004537 Sechium edule HOM05D004432 ORTHO05D005427 1.6e-115 420.2 383 63.2
Atru.chr10.352 Acer truncatum HOM05D004432 ORTHO05D005427 2.1e-115 419.9 379 63.3
PGSC0003DMG401017733 Solanum tuberosum HOM05D004432 ORTHO05D005427 2.1e-115 419.9 381 63.8
TWI63G0296 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 3.9e-114 415.6 392 62.8
Duzib248G0466 Durio zibethinus HOM05D004432 ORTHO05D005427 1.1e-113 414.1 400 59.5
Ciclev10015448m.g Citrus clementina HOM05D004432 ORTHO05D005427 1.9e-113 413.3 369 62.9
THA.LOC104798567 Tarenaya hassleriana HOM05D004432 ORTHO05D005427 2.5e-113 412.9 360 67.2
Phvul.002G325100 Phaseolus vulgaris HOM05D004432 ORTHO05D005427 1.4e-111 407.1 387 61.2
ClCG01G025530 Citrullus lanatus HOM05D004432 ORTHO05D005427 3.4e-110 402.5 429 56.2
PSO541G2602 Papaver somniferum HOM05D004432 ORTHO05D005427 3.4e-110 402.5 390 61.0
CiPaw.10G104800 Carya illinoinensis HOM05D004432 ORTHO05D005427 1.7e-109 400.2 362 63.8
Sabra03G0044900 Salix brachista HOM05D004432 ORTHO05D005427 2.2e-109 399.8 388 62.4
Manes.03G075400 Manihot esculenta HOM05D004432 ORTHO05D005427 2.9e-109 399.4 389 61.2
Peaxi162Scf00048g01413 Petunia axillaris HOM05D004432 ORTHO05D005427 3.8e-109 399.1 377 61.3
SalBow8G1652 Salvia bowleyana HOM05D004432 ORTHO05D005427 1.1e-108 397.5 383 60.1
Lj1A1149G74 Lonicera japonica HOM05D004432 ORTHO05D005427 1.9e-108 396.7 427 56.7
FAN11G2748 Fragaria x ananassa HOM05D004432 ORTHO05D005427 2.5e-108 396.4 358 64.2
Solyc02g081620.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 2.5e-108 396.4 381 61.2
Atru.chr8.662 Acer truncatum HOM05D004432 ORTHO05D005427 3.2e-108 396.0 361 62.3
Cc09_g05240 Coffea canephora HOM05D004432 ORTHO05D005427 4.2e-108 395.6 362 62.2
Prupe.4G117400 Prunus persica HOM05D004432 ORTHO05D005427 5.5e-108 395.2 374 61.2
CSS0030674 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 9.4e-108 394.4 380 62.6
MBI18_g00544_MAGBIO Magnolia biondii HOM05D004432 ORTHO05D005427 9.4e-108 394.4 381 60.4
TWI15G0381 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 9.4e-108 394.4 384 60.9
Dinv31191 Davidia involucrata HOM05D004432 ORTHO05D005427 1.2e-107 394.0 383 60.6
MELO3C007033.2 Cucumis melo HOM05D004432 ORTHO05D005427 2.1e-107 393.3 359 62.4
CANSAT35G1493 Cannabis sativa HOM05D004432 ORTHO05D005427 2.7e-107 392.9 372 62.1
TWI34G0639 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 3.6e-107 392.5 404 60.4
Gorai.008G050900 Gossypium raimondii HOM05D004432 ORTHO05D005427 4.7e-107 392.1 352 62.8
PGR042G3514 Punica granatum HOM05D004432 ORTHO05D005427 1.4e-106 390.6 384 60.7
TAR624G0396 Trochodendron aralioides HOM05D004432 ORTHO05D005427 3.9e-106 389.0 384 59.1
Hma1.2p1_0088F.1_g045180 Hydrangea macrophylla HOM05D004432 ORTHO05D005427 1.1e-105 387.5 379 58.6
GSVIVG01012145001 Vitis vinifera HOM05D004432 ORTHO05D005427 4.4e-105 385.6 384 59.1
ECA232G3357 Erigeron canadensis HOM05D004432 ORTHO05D005427 2.2e-104 383.3 390 58.5
HanXRQChr09g0257831 Helianthus annuus HOM05D004432 ORTHO05D005427 2.8e-104 382.9 382 60.5
TPR.G12851 Trifolium pratense HOM05D004432 ORTHO05D005427 2.8e-104 382.9 389 60.4
Peaxi162Scf00198g01525 Petunia axillaris HOM05D004432 ORTHO05D005427 2.4e-103 379.8 391 58.8
GSVIVG01015880001 Vitis vinifera HOM05D004432 ORTHO05D005427 4.1e-103 379.0 381 61.2
Nitab4.5_0010401g0010 Nicotiana tabacum HOM05D004432 ORTHO05D005427 1.2e-102 377.5 357 61.3
Nitab4.5_0006794g0040 Nicotiana tabacum HOM05D004432 ORTHO05D005427 1.5e-102 377.1 357 61.6
TWI15G1036 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 2.0e-102 376.7 375 60.8
Oeu056059.4 Olea europaea HOM05D004432 ORTHO05D005427 4.5e-102 375.6 425 57.2
Actinidia33704 Actinidia chinensis HOM05D004432 ORTHO05D005427 2.9e-101 372.9 361 61.8
Duzib132G0752 Durio zibethinus HOM05D004432 ORTHO05D005427 8.5e-101 371.3 351 61.3
Eucgr.E04313 Eucalyptus grandis HOM05D004432 ORTHO05D005427 1.9e-100 370.2 374 59.4
CAN.G809.71 Capsicum annuum HOM05D004432 ORTHO05D005427 2.5e-100 369.8 394 58.9
Glyma.08G049300 Glycine max HOM05D004432 ORTHO05D005427 3.2e-100 369.4 370 62.2
Glyma.05G241800 Glycine max HOM05D004432 ORTHO05D005427 7.2e-100 368.2 385 59.7
SGA_v2.0_scaffold298G47706 Striga asiatica HOM05D004432 ORTHO05D005427 2.1e-99 366.7 384 58.6
CSS0046356 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 1.4e-98 364.0 395 57.5
Sopen02g010370 Solanum pennellii HOM05D004432 ORTHO05D005427 1.4e-98 364.0 376 58.5
Cpa.g.sc30.114 Carica papaya HOM05D004432 ORTHO05D005427 1.8e-98 363.6 363 59.2
Migut.M02008 Erythranthe guttata HOM05D004432 ORTHO05D005427 1.8e-98 363.6 384 57.8
Sopen02g026240 Solanum pennellii HOM05D004432 ORTHO05D005427 3.9e-98 362.5 359 59.3
Solyc02g032120.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 5.2e-98 362.1 376 58.5
unitig_748.g7489 Utricularia gibba HOM05D004432 ORTHO05D005427 6.7e-98 361.7 378 59.3
arahy.Tifrunner.gnm1.ann1.GLQ3B3 Arachis hypogaea HOM05D004432 ORTHO05D005427 1.1e-97 360.9 370 60.0
Lalb_Chr05g0222011 Lupinus albus HOM05D004432 ORTHO05D005427 2.6e-97 359.8 388 56.2
arahy.Tifrunner.gnm1.ann1.AGE02H Arachis hypogaea HOM05D004432 ORTHO05D005427 3.3e-97 359.4 370 59.7
PSO675G3183 Papaver somniferum HOM05D004432 ORTHO05D005427 3.3e-97 359.4 364 58.0
SGA_v2.0_scaffold175G39329 Striga asiatica HOM05D004432 ORTHO05D005427 3.3e-97 359.4 451 52.8
Potri.001G160700 Populus trichocarpa HOM05D004432 ORTHO05D005427 4.4e-97 359.0 364 56.9
DCAR_003760 Daucus carota HOM05D004432 ORTHO05D005427 1.3e-96 357.5 362 58.6
Sabra01G0131600 Salix brachista HOM05D004432 ORTHO05D005427 2.2e-96 356.7 379 60.7
Oeu018409.2 Olea europaea HOM05D004432 ORTHO05D005427 4.8e-96 355.5 433 54.7
Nn7g38330 Nelumbo nucifera HOM05D004432 ORTHO05D005427 1.4e-95 354.0 362 57.2
Dinv05655 Davidia involucrata HOM05D004432 ORTHO05D005427 3.8e-93 345.9 379 55.7
Lsat_1_v5_gn_8_106840 Lactuca sativa HOM05D004432 ORTHO05D005427 5.0e-93 345.5 376 57.4
VMungo0251G3730 Vigna mungo HOM05D004432 ORTHO05D005427 3.6e-91 339.3 385 54.5
EL10Ac6g15345 Beta vulgaris HOM05D004432 ORTHO05D005427 1.4e-90 337.4 386 56.0
Actinidia22430 Actinidia chinensis HOM05D004432 ORTHO05D005427 4.0e-90 335.9 356 56.7
Aqoxy1G01396 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 4.0e-90 335.9 361 56.2
Medtr8g106220 Medicago truncatula HOM05D004432 ORTHO05D005427 5.2e-90 335.5 365 56.2
Lj4g0008002 Lotus japonicus HOM05D004432 ORTHO05D005427 2.6e-89 333.2 369 59.3
Psat7g005440 Pisum sativum HOM05D004432 ORTHO05D005427 4.4e-89 332.4 363 55.6
ATR0568G227 Amborella trichopoda HOM05D004432 ORTHO05D005427 1.3e-88 330.9 384 53.1
AUR62017849 Chenopodium quinoa HOM05D004432 ORTHO05D005427 7.0e-87 325.1 424 51.2
HPP92_006155 Vanilla planifolia HOM05D004432 ORTHO05D005427 2.0e-86 323.6 356 55.6
Os09g0560900 Oryza sativa ssp. japonica HOM05D004432 ORTHO05D005427 4.5e-86 322.4 372 56.7
HPP92_024334 Vanilla planifolia HOM05D004432 ORTHO05D005427 4.5e-86 322.4 353 56.1
MSTRG.16369 Avicennia marina HOM05D004432 ORTHO05D005427 5.0e-85 318.9 361 53.5
Ca_17239_v3 Cicer arietinum L. HOM05D004432 ORTHO05D005427 1.9e-84 317.0 379 52.5
Hund04373 Selenicereus undatus HOM05D004432 ORTHO05D005427 1.4e-82 310.8 498 44.6
Lalb_Chr10g0095541 Lupinus albus HOM05D004432 ORTHO05D005427 8.8e-82 308.1 403 50.6
Sc16g0004480 Simmondsia chinensis HOM05D004432 ORTHO05D005427 2.6e-81 306.6 359 53.5
CARHR030510 Cardamine hirsuta HOM05D004432 ORTHO05D005427 3.4e-81 306.2 183 85.2
AUR62003535 Chenopodium quinoa HOM05D004432 ORTHO05D005427 8.3e-80 301.6 360 52.8
Cfa001128 Carpinus fangiana HOM05D004432 ORTHO05D005427 7.0e-79 298.5 333 57.4
Lalb_Chr09g0330711 Lupinus albus HOM05D004432 ORTHO05D005427 2.0e-78 297.0 369 55.0
Ah.03g147620 Amaranthus hybridus HOM05D004432 ORTHO05D005427 4.5e-78 295.8 351 54.1
SEGI_00495 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 1.3e-77 294.3 402 47.3
QL11p012272 Quercus lobata HOM05D004432 ORTHO05D005427 3.8e-77 292.7 277 60.6
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 2.1e-75 287.0 324 54.6
Potri.003G074200 Populus trichocarpa HOM05D004432 ORTHO05D005427 3.0e-74 283.1 272 59.6
Mapoly0070s0095 Marchantia polymorpha HOM05D004432 ORTHO05D005427 2.6e-73 280.0 409 44.0
TWI32G0924 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.3e-72 277.7 328 56.1
AagrBONN_evm.TU.Sc2ySwM_344.4234 Anthoceros agrestis HOM05D004432 ORTHO05D005427 1.1e-68 264.6 409 48.4
vmacro03556 Vaccinium macrocarpon HOM05D004432 ORTHO05D005427 2.5e-68 263.5 486 41.4
Pp3c22_1400 Physcomitrium patens HOM05D004432 ORTHO05D005427 6.4e-64 248.8 407 45.0
SMO239G0124 Selaginella moellendorffii HOM05D004432 ORTHO05D005427 8.0e-59 231.9 376 44.7
TAR629G1033 Trochodendron aralioides HOM05D004432 ORTHO05D005427 6.8e-58 228.8 279 50.2
CiPaw.09G137500 Carya illinoinensis HOM05D004432 ORTHO05D005427 2.2e-56 223.8 162 68.5
Dinv23013 Davidia involucrata HOM05D004432 ORTHO05D005427 7.3e-52 208.8 257 53.7
Haze_05275 Corylus avellana HOM05D004432 ORTHO05D005427 3.6e-51 206.5 279 52.0
SEGI_03989 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 1.7e-48 197.6 310 44.2
Haze_05262 Corylus avellana HOM05D004432 ORTHO05D005427 5.4e-47 192.6 98 89.8
Rhsim13G0133800 Rhododendron simsii HOM05D004432 ORTHO05D005427 1.2e-46 191.4 317 44.5
RhsimUnG0176800 Rhododendron simsii HOM05D004432 ORTHO05D005427 1.2e-46 191.4 317 44.5
Rhsim13G0133700 Rhododendron simsii HOM05D004432 ORTHO05D005427 2.3e-45 187.2 99 88.9
RhsimUnG0176700 Rhododendron simsii HOM05D004432 ORTHO05D005427 2.3e-45 187.2 99 88.9
Zm00001eb104750 Zea mays HOM05D004432 ORTHO05D005427 5.1e-45 186.0 311 48.9
CiPaw.09G137600 Carya illinoinensis HOM05D004432 ORTHO05D005427 3.4e-41 173.3 186 60.8
Dinv23014 Davidia involucrata HOM05D004432 ORTHO05D005427 1.9e-39 167.5 93 86.0
CBR_g1074 Chara braunii HOM05D004432 ORTHO05D005427 9.2e-39 165.2 378 41.0
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 1.1e-31 141.7 685 26.9
SEGI_09071 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 6.6e-29 132.5 95 73.7
Sopen12g027920 Solanum pennellii HOM05D004432 ORTHO05D005427 9.0e-26 122.1 70 78.6
Atru.chr10.360 Acer truncatum HOM05D004432 ORTHO05D005427 1.2e-25 121.7 214 43.9
MCO08G042 Micromonas commoda HOM05D004432 ORTHO05D005427 4.9e-24 116.3 89 65.2
Cre06.g305200 Chlamydomonas reinhardtii HOM05D004432 ORTHO05D005427 1.1e-23 115.2 111 51.4
Nitab4.5_0004903g0050 Nicotiana tabacum HOM05D004432 ORTHO05D005427 1.1e-23 115.2 224 42.4
GSVIVG01015874001 Vitis vinifera HOM05D004432 ORTHO05D005427 1.8e-21 107.8 65 78.5
Pp3c19_17160 Physcomitrium patens HOM05D004432 ORTHO05D005427 3.9e-21 106.7 141 50.4
Aqoxy1G01395 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 5.6e-20 102.8 358 28.5
Dinv01000 Davidia involucrata HOM05D004432 ORTHO05D005427 2.1e-14 84.3 152 41.4
CAN.G958.2 Capsicum annuum HOM05D004432 ORTHO05D005427 1.3e-13 81.6 78 56.4
Cfa025961 Carpinus fangiana HOM05D004432 ORTHO05D005427 2.5e-12 77.4 389 27.5
Psat7g229080 Pisum sativum HOM05D004432 ORTHO05D005427 9.3e-07 58.9 74 45.9


User provided reference genes

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