Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 8.0e-62 240.4 130 100.0
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 1.3e-59 233.0 131 97.7
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 2.8e-59 231.9 131 97.7
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 7.7e-57 223.8 131 94.7
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 6.6e-56 220.7 129 91.5
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 7.2e-55 217.2 129 89.9
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 3.6e-54 214.9 130 86.2
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 4.7e-54 214.5 130 86.2
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 4.7e-54 214.5 130 85.4
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 8.0e-54 213.8 129 89.9
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 1.4e-53 213.0 130 84.6
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 3.0e-53 211.8 130 83.8
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 4.0e-53 211.5 129 86.0
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 5.2e-53 211.1 130 83.8
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 1.2e-52 209.9 130 83.1
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 2.6e-52 208.8 129 84.5
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 2.6e-52 208.8 127 84.3
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 3.4e-52 208.4 129 86.0
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 5.7e-52 207.6 129 84.5
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 5.7e-52 207.6 129 84.5
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 9.8e-52 206.8 130 83.8
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 9.8e-52 206.8 130 81.5
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 1.3e-51 206.5 129 86.0
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 1.7e-51 206.1 129 82.2
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 1.7e-51 206.1 129 82.2
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 2.2e-51 205.7 129 86.0
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 2.2e-51 205.7 129 86.0
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 2.8e-51 205.3 129 86.0
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 2.8e-51 205.3 129 86.0
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 2.8e-51 205.3 129 86.0
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 2.8e-51 205.3 129 82.9
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 2.8e-51 205.3 129 82.2
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 2.8e-51 205.3 129 85.3
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 2.8e-51 205.3 129 85.3
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 3.7e-51 204.9 129 84.5
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 4.9e-51 204.5 129 82.2
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 6.3e-51 204.1 129 83.7
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 6.3e-51 204.1 129 83.7
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 8.3e-51 203.8 129 84.5
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 1.1e-50 203.4 129 85.3
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 1.1e-50 203.4 129 85.3
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.1e-50 203.4 129 82.2
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.1e-50 203.4 129 82.2
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 1.1e-50 203.4 127 83.5
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 1.4e-50 203.0 129 82.2
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 1.4e-50 203.0 130 84.6
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 1.4e-50 203.0 129 82.9
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 1.4e-50 203.0 129 84.5
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 1.4e-50 203.0 129 82.9
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.8e-50 202.6 129 83.7
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 2.4e-50 202.2 129 83.7
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.1e-50 201.8 129 83.7
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 3.1e-50 201.8 129 82.9
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 3.1e-50 201.8 129 80.6
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 4.1e-50 201.4 129 82.2
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 4.1e-50 201.4 129 80.6
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 5.4e-50 201.1 129 83.7
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 5.4e-50 201.1 129 81.4
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 5.4e-50 201.1 127 81.9
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 5.4e-50 201.1 127 81.9
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 9.2e-50 200.3 127 81.1
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 1.2e-49 199.9 127 82.7
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 1.6e-49 199.5 129 80.6
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 2.0e-49 199.1 129 79.8
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 2.0e-49 199.1 129 81.4
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 4.5e-49 198.0 127 81.1
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 4.5e-49 198.0 126 80.2
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 7.8e-49 197.2 125 81.6
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 1.3e-48 196.4 129 83.7
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 2.3e-48 195.7 129 83.7
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 2.9e-48 195.3 129 77.5
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 3.9e-48 194.9 129 81.4
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 1.1e-47 193.4 136 75.7
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 1.5e-47 193.0 140 75.0
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 9.5e-47 190.3 112 86.6
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 1.6e-46 189.5 133 81.2
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 1.6e-46 189.5 129 78.3
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.3e-45 185.7 142 73.2
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 5.2e-45 184.5 127 74.8
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 5.2e-45 184.5 111 83.8
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 1.2e-44 183.3 129 72.1
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 2.0e-44 182.6 127 74.0
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 2.0e-44 182.6 130 73.8
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 1.3e-43 179.9 109 85.3
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 2.2e-43 179.1 113 83.2
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 3.7e-43 178.3 109 86.2
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 6.4e-43 177.6 110 82.7
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 8.3e-43 177.2 184 57.1
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 8.3e-43 177.2 126 73.8
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 1.1e-42 176.8 120 78.3
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.4e-42 176.4 120 79.2
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 1.4e-42 176.4 106 87.7
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 1.9e-42 176.0 111 83.8
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 2.4e-42 175.6 107 85.0
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 4.1e-42 174.9 110 81.8
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.2e-41 173.3 120 77.5
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 2.0e-41 172.6 110 80.0
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 3.5e-41 171.8 123 75.6
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 4.6e-41 171.4 118 79.7
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 6.0e-41 171.0 105 85.7
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.3e-40 169.9 105 84.8
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 1.7e-40 169.5 131 73.3
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 1.7e-40 169.5 104 85.6
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 5.0e-40 167.9 116 76.7
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 3.3e-39 165.2 125 68.0
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 5.6e-39 164.5 105 81.9
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 7.3e-39 164.1 128 73.4
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 4.7e-38 161.4 104 80.8
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 6.2e-38 161.0 118 76.3
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 5.2e-37 157.9 110 74.5
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 5.8e-36 154.5 159 57.2
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 5.8e-36 154.5 90 87.8
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 1.3e-35 153.3 89 87.6
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 1.3e-35 153.3 90 86.7
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 1.7e-35 152.9 126 68.3
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 2.2e-35 152.5 122 64.8
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 3.7e-35 151.8 128 60.9
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 4.9e-35 151.4 90 85.6
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 8.3e-35 150.6 87 89.7
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 2.4e-34 149.1 117 72.6
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 2.4e-34 149.1 87 87.4
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 3.2e-34 148.7 90 85.6
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 7.0e-34 147.5 90 82.2
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 1.2e-33 146.7 84 89.3
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 4.6e-33 144.8 110 65.5
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 6.0e-33 144.4 90 82.2
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 6.0e-33 144.4 87 87.4
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 1.3e-32 143.3 93 79.6
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 2.3e-32 142.5 88 85.2
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 9.5e-31 137.1 129 63.6
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 9.5e-31 137.1 91 78.0
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 2.3e-29 132.5 102 71.6
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 6.8e-29 131.0 95 77.9
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 2.4e-26 122.5 71 88.7
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 4.6e-25 118.2 90 73.3
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.0e-24 117.1 90 73.3
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 3.9e-24 115.2 66 89.4
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 1.6e-22 109.8 80 75.0
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 1.1e-21 107.1 61 91.8
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 2.4e-21 105.9 119 50.4
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 5.8e-20 101.3 63 81.0
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 1.1e-18 97.1 67 71.6
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 1.4e-18 96.7 121 42.1
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 1.4e-18 96.7 64 75.0
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 4.2e-18 95.1 64 73.4
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 9.2e-18 94.0 109 52.3
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 9.2e-18 94.0 78 62.8
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 2.7e-17 92.4 66 71.2
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 4.6e-17 91.7 65 72.3
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 5.1e-16 88.2 65 69.2
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 2.5e-15 85.9 51 88.2
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.6e-14 83.2 119 39.5
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.2e-09 67.0 123 33.3
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 8.7e-08 60.8 124 33.9


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