Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 2.5e-195 685.3 351 100.0
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 3.0e-188 661.8 351 95.7
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 5.1e-172 607.8 352 88.9
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 5.7e-171 604.4 341 89.1
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 4.1e-169 598.2 351 86.3
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.2e-168 596.7 355 85.9
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 2.0e-168 595.9 355 85.6
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 4.5e-168 594.7 358 86.0
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 1.3e-167 593.2 358 85.8
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 3.8e-167 591.7 358 85.2
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 6.1e-165 584.3 353 84.7
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 4.7e-149 531.6 335 80.6
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.8e-140 503.1 353 76.2
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 2.3e-135 486.1 337 71.5
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 3.3e-126 455.7 344 67.4
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 5.6e-126 454.9 334 68.3
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 1.6e-125 453.4 319 70.8
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 2.8e-125 452.6 338 66.3
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.4e-124 450.3 333 68.8
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 5.2e-124 448.4 337 66.5
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 6.8e-124 448.0 330 69.7
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 8.9e-124 447.6 343 67.1
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 8.9e-124 447.6 334 67.1
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 8.9e-124 447.6 321 69.8
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.5e-123 446.8 335 67.2
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 5.8e-123 444.9 339 67.0
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 7.5e-123 444.5 317 69.1
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 1.3e-122 443.7 307 71.7
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.2e-122 443.0 343 66.5
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 6.4e-122 441.4 310 69.7
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 8.3e-122 441.0 288 74.7
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 8.3e-122 441.0 334 66.2
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 8.3e-122 441.0 338 66.3
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 1.9e-121 439.9 321 69.2
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.9e-121 439.9 338 66.0
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 2.4e-121 439.5 283 73.1
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 4.1e-121 438.7 323 69.3
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.1e-121 438.7 338 66.3
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.4e-121 438.3 331 66.2
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 1.6e-120 436.8 338 64.5
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.6e-120 436.8 338 66.0
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.1e-120 436.4 388 59.5
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 4.6e-120 435.3 337 66.2
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 6.0e-120 434.9 338 64.2
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 6.0e-120 434.9 343 64.7
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 6.0e-120 434.9 350 63.1
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 2.3e-119 433.0 344 64.5
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 3.0e-119 432.6 341 65.7
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 3.0e-119 432.6 307 68.7
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 3.0e-119 432.6 325 67.1
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 5.1e-119 431.8 337 65.3
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 6.6e-119 431.4 343 64.1
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 6.6e-119 431.4 279 72.0
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 6.6e-119 431.4 336 64.6
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.1e-118 430.6 279 72.8
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.5e-118 430.3 331 65.9
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 3.3e-118 429.1 329 66.3
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 7.3e-118 427.9 340 63.2
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 1.6e-117 426.8 295 71.5
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 2.8e-117 426.0 284 71.1
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 4.7e-117 425.2 342 63.7
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 4.7e-117 425.2 305 66.9
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 8.1e-117 424.5 281 72.6
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.4e-116 423.7 334 64.7
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.8e-116 423.3 335 66.9
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 4.0e-116 422.2 308 66.2
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.6e-115 419.5 281 71.9
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.8e-115 418.3 284 70.4
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 5.8e-115 418.3 309 68.3
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 7.6e-115 417.9 313 67.4
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 9.9e-115 417.5 309 66.3
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 1.3e-114 417.2 320 67.8
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 2.2e-114 416.4 281 70.1
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.1e-113 414.1 338 63.0
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.1e-113 414.1 383 58.0
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.4e-113 413.7 282 71.6
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 2.4e-113 412.9 289 69.9
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 1.0e-111 407.5 338 63.3
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 1.0e-111 407.5 321 64.8
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 3.9e-111 405.6 257 74.7
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.5e-110 403.7 303 66.3
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 2.8e-109 399.4 359 57.7
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 8.9e-108 394.4 342 61.1
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 5.8e-107 391.7 335 60.0
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 1.7e-106 390.2 291 67.7
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 6.4e-106 388.3 307 63.2
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 5.4e-105 385.2 410 50.7
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 3.5e-104 382.5 265 67.5
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 2.3e-103 379.8 281 66.2
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 6.2e-101 371.7 279 64.9
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 3.2e-97 359.4 309 60.2
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 5.1e-95 352.1 231 72.7
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 1.2e-91 340.9 328 53.7
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 2.4e-89 333.2 258 60.5
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 6.9e-84 315.1 349 48.7
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 2.0e-83 313.5 253 59.7
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 3.4e-83 312.8 275 58.9
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 7.6e-83 311.6 319 53.9
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 2.2e-82 310.1 313 56.9
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 8.4e-82 308.1 276 58.3
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 9.3e-81 304.7 279 58.8
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 9.7e-70 268.1 154 76.0
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 5.3e-68 262.3 218 61.0
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 6.9e-60 235.3 157 70.1
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.2e-53 213.8 134 73.9
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.4e-52 211.1 134 73.9
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.4e-52 211.1 267 43.4
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 4.1e-52 209.5 135 73.3
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.1e-49 201.4 282 42.9
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 4.8e-45 186.0 134 64.9
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 9.8e-38 161.8 97 77.3
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 5.2e-31 139.4 266 33.8
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 2.0e-30 137.5 254 32.7
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.3e-29 134.8 336 31.8
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 7.2e-25 119.0 103 65.0
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 3.1e-15 87.0 108 40.7
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.6e-08 63.5 53 54.7


User provided reference genes

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