Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G27695 Arabidopsis thaliana HOM05D014382 ORTHO05D010434 1.2e-19 99.8 92 100.0
Carub.0001s2620 Capsella rubella HOM05D014382 ORTHO05D010434 1.6e-16 89.4 92 93.5
Sp1g23920 Schrenkiella parvula HOM05D014382 ORTHO05D010434 1.8e-15 85.9 90 90.0
AL1G41220 Arabidopsis lyrata HOM05D014382 ORTHO05D010434 2.3e-15 85.5 87 94.3
CARHR027190 Cardamine hirsuta HOM05D014382 ORTHO05D010434 2.3e-15 85.5 92 91.3
Thhalv10009209m.g Eutrema salsugineum HOM05D014382 ORTHO05D010434 9.8e-14 80.1 90 87.8
Aa31LG6G15440 Aethionema arabicum HOM05D014382 ORTHO05D010434 9.2e-12 73.6 91 83.5
A08p26110 Brassica napus HOM05D014382 ORTHO05D010434 1.2e-11 73.2 90 86.7
BolC3t19697H Brassica oleracea HOM05D000525 ORTHO05D001921 1.6e-11 72.8 90 85.6
BraA08t34562Z Brassica rapa HOM05D000525 ORTHO05D001921 4.5e-11 71.2 90 85.6
Sed0009245 Sechium edule HOM05D009483 ORTHO05D010434 1.2e-06 56.6 91 73.6
CiPaw.15G047300 Carya illinoinensis HOM05D009483 ORTHO05D010434 1.5e-06 56.2 88 72.7
Sed0012458 Sechium edule HOM05D009483 ORTHO05D010434 2.0e-06 55.8 91 72.5
THA.LOC104812585 Tarenaya hassleriana HOM05D014382 ORTHO05D010434 2.6e-06 55.5 92 73.9
BcaC01g01581 Brassica carinata HOM05D014382 ORTHO05D010434 3.4e-06 55.1 62 74.2
Atru.chr13.800 Acer truncatum HOM05D009483 ORTHO05D010434 7.5e-06 53.9 80 75.0


User provided reference genes

Program Settings