Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G26815 Arabidopsis thaliana HOM05D000051 ORTHO05D081945 5.2e-51 204.1 107 100.0
Thhalv10009745m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.3e-13 78.2 69 65.2
Carub.0001s2407 Capsella rubella HOM05D000051 ORTHO05D000015 2.1e-12 75.9 66 60.6
AL1G38800 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.8e-12 75.5 64 60.9
Carub.0001s2408 Capsella rubella HOM05D000051 ORTHO05D000015 4.8e-12 74.7 60 65.0
Carub.0320s0001 Capsella rubella HOM05D000051 ORTHO05D000015 4.8e-12 74.7 60 65.0
AT1G22000 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.4e-11 73.2 65 60.0
Thhalv10009950m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.1e-11 72.0 65 60.0
A09p40240 Brassica napus HOM05D000051 ORTHO05D000015 5.3e-11 71.2 63 58.7
BraA09t39522Z Brassica rapa HOM05D000051 ORTHO05D000015 5.3e-11 71.2 63 58.7
AL1G38860 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.6e-10 68.9 86 46.5
BcaC06g35108 Brassica carinata HOM05D000051 ORTHO05D000015 2.6e-10 68.9 55 65.5
C07p19700 Brassica napus HOM05D000051 ORTHO05D000015 4.5e-10 68.2 55 65.5
BolC7t42486H Brassica oleracea HOM05D000051 ORTHO05D000015 4.5e-10 68.2 55 65.5
CARHR024990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.7e-09 66.2 64 62.5
AL1G38680 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 8.4e-09 63.9 63 61.9
BcaB03g11993 Brassica carinata HOM05D000051 ORTHO05D018454 1.9e-08 62.8 67 56.7
BcaC03g15909 Brassica carinata HOM05D000051 ORTHO05D000015 4.2e-08 61.6 57 59.6
C02p36720 Brassica napus HOM05D000051 ORTHO05D000015 4.2e-08 61.6 57 59.6
BolC2t09676H Brassica oleracea HOM05D000051 ORTHO05D000015 4.2e-08 61.6 57 59.6
Carub.0004s2887 Capsella rubella HOM05D000051 ORTHO05D000015 1.6e-07 59.7 46 71.7
Aa31sc535G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.3e-06 56.6 61 52.5
Aa31sc352G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.8e-06 56.2 55 56.4
Aa31sc352G40 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.3e-06 55.8 61 52.5


User provided reference genes

Program Settings