Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 4.2e-78 294.7 153 100.0
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 3.1e-73 278.5 153 94.1
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 9.1e-73 276.9 154 94.2
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 6.1e-69 264.2 154 90.3
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 5.1e-68 261.2 153 91.5
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 4.4e-67 258.1 153 89.5
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 2.4e-65 252.3 153 86.9
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 1.6e-64 249.6 153 86.3
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 2.0e-64 249.2 150 86.0
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 4.5e-64 248.1 150 85.3
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 5.9e-64 247.7 153 85.6
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 1.7e-63 246.1 150 86.0
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.7e-63 246.1 150 86.0
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 3.0e-60 235.3 153 81.0
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 7.5e-43 177.6 143 63.6
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 4.1e-41 171.8 145 60.7
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 4.1e-41 171.8 153 58.2
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 5.4e-41 171.4 153 58.2
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 5.4e-41 171.4 145 60.7
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 7.0e-41 171.0 145 60.7
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 7.0e-41 171.0 143 60.8
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 9.2e-41 170.6 143 60.8
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 9.2e-41 170.6 141 61.7
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 1.2e-40 170.2 153 58.8
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 1.2e-40 170.2 153 57.5
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 1.6e-40 169.9 141 61.7
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 1.6e-40 169.9 150 56.0
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 2.0e-40 169.5 151 57.6
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.7e-40 169.1 145 60.0
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 3.5e-40 168.7 153 58.8
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 3.5e-40 168.7 143 60.1
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 4.5e-40 168.3 145 60.0
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 5.9e-40 167.9 141 59.6
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 5.9e-40 167.9 153 58.8
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 7.7e-40 167.5 143 59.4
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 1.7e-39 166.4 139 61.2
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 2.9e-39 165.6 143 59.4
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 2.9e-39 165.6 143 60.1
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 3.8e-39 165.2 144 56.9
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 8.6e-39 164.1 153 57.5
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 8.6e-39 164.1 136 59.6
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 8.6e-39 164.1 145 57.2
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.1e-38 163.7 143 59.4
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 1.1e-38 163.7 143 58.0
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 1.1e-38 163.7 143 58.7
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 1.5e-38 163.3 143 57.3
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 1.5e-38 163.3 153 55.6
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 2.5e-38 162.5 142 57.7
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 2.5e-38 162.5 143 58.7
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 4.3e-38 161.8 143 58.0
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 4.3e-38 161.8 141 56.7
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 4.3e-38 161.8 142 56.3
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 4.3e-38 161.8 149 54.4
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 9.5e-38 160.6 141 58.9
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 1.2e-37 160.2 143 56.6
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 1.2e-37 160.2 153 56.9
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 1.6e-37 159.8 139 57.6
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 2.8e-37 159.1 143 57.3
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 2.8e-37 159.1 139 56.8
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 2.8e-37 159.1 139 56.1
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 3.6e-37 158.7 144 57.6
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 3.6e-37 158.7 149 54.4
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 4.7e-37 158.3 141 56.0
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 4.7e-37 158.3 129 60.5
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 4.7e-37 158.3 143 54.5
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 8.0e-37 157.5 140 58.6
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 1.8e-36 156.4 140 57.9
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 2.3e-36 156.0 138 57.2
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 3.0e-36 155.6 138 57.2
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 4.0e-36 155.2 151 53.6
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 5.2e-36 154.8 124 61.3
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 5.2e-36 154.8 139 55.4
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 6.8e-36 154.5 153 55.6
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 8.9e-36 154.1 139 55.4
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 1.2e-35 153.7 143 55.2
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 2.0e-35 152.9 143 56.6
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 2.6e-35 152.5 153 53.6
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 4.9e-34 148.3 143 55.9
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 4.9e-34 148.3 132 56.1
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 6.4e-34 147.9 138 52.9
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 6.4e-34 147.9 138 52.9
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 6.4e-34 147.9 160 53.1
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.1e-33 147.1 153 51.6
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 3.2e-33 145.6 152 52.0
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 3.5e-32 142.1 143 53.1
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 4.6e-32 141.7 143 54.5
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 5.9e-32 141.4 143 55.2
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 2.3e-31 139.4 152 50.7
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 3.9e-31 138.7 143 52.4
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 3.9e-31 138.7 111 61.3
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 8.6e-31 137.5 136 51.5
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 8.6e-31 137.5 108 63.9
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.5e-30 136.7 139 54.7
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 2.5e-30 136.0 155 49.7
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.5e-30 136.0 105 63.8
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 5.6e-30 134.8 140 52.9
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 1.2e-29 133.7 101 73.3
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 1.6e-29 133.3 141 48.2
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 4.7e-29 131.7 135 50.4
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 1.0e-28 130.6 190 42.6
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 5.8e-27 124.8 75 88.0
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 1.3e-26 123.6 129 50.4
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.1e-25 120.6 138 47.1
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 2.4e-25 119.4 145 42.1
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 4.1e-25 118.6 139 44.6
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 7.0e-25 117.9 104 58.7
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 9.2e-25 117.5 150 45.3
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 5.0e-23 111.7 135 45.9
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 2.5e-22 109.4 87 64.4
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 5.6e-22 108.2 140 44.3
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 9.5e-22 107.5 116 52.6
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 3.6e-21 105.5 103 55.3
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 2.2e-18 96.3 65 72.3
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 3.9e-15 85.5 71 59.2
C05p24340 Brassica napus HOM05D052559 ORTHO05D040828 5.6e-14 81.6 196 37.8
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 3.6e-13 79.0 68 57.4
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 4.0e-12 75.5 147 38.8
BcaC02g08720 Brassica carinata HOM05D028134 ORTHO05D014959 2.2e-10 69.7 41 85.4
BcaC07g40802 Brassica carinata HOM05D000076 ORTHO05D014959 2.1e-08 63.2 41 78.0
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 1.5e-06 57.0 56 53.6
BolC5t31167H Brassica oleracea HOM05D052559 ORTHO05D040828 1.9e-06 56.6 99 44.4
CARHR025310 Cardamine hirsuta HOM05D006937 ORTHO05D008747 3.3e-06 55.8 31 93.5


User provided reference genes

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