Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 3.1e-254 881.3 456 100.0
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 1.0e-236 823.2 456 93.0
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 2.4e-230 802.0 457 91.2
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 6.6e-220 767.3 456 86.0
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 8.3e-215 750.4 460 85.2
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 3.0e-212 741.9 463 84.7
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 2.7e-205 718.8 463 84.2
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 4.6e-205 718.0 463 84.0
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 6.9e-201 704.1 462 82.9
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 1.2e-200 703.4 462 82.9
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 9.3e-198 693.7 461 78.7
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 2.1e-189 666.0 464 78.9
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 3.4e-152 542.3 428 65.7
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 2.6e-147 526.2 432 61.8
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 3.3e-147 525.8 443 62.1
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 3.3e-147 525.8 443 62.1
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.7e-146 523.5 413 64.2
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 1.7e-146 523.5 453 59.4
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 3.7e-146 522.3 430 62.3
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 1.6e-144 516.9 456 61.8
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.6e-144 516.2 457 59.1
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 1.0e-143 514.2 457 59.1
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 1.0e-143 514.2 440 60.2
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 1.3e-143 513.8 424 62.3
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 1.3e-143 513.8 413 63.9
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 1.5e-142 510.4 405 62.2
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 1.6e-141 506.9 456 57.9
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 2.7e-141 506.1 447 59.3
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.6e-141 505.8 462 57.8
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 8.0e-141 504.6 444 59.7
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 1.0e-140 504.2 412 62.4
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 1.0e-140 504.2 432 60.2
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 1.0e-140 504.2 400 64.8
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 1.4e-140 503.8 405 63.5
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 3.0e-140 502.7 459 60.1
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 5.2e-140 501.9 442 59.7
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 5.2e-140 501.9 466 57.3
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 1.2e-139 500.7 440 59.1
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 7.5e-139 498.0 438 58.9
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 1.7e-138 496.9 432 60.4
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.1e-137 494.2 408 61.5
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 1.4e-137 493.8 402 62.4
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 1.4e-137 493.8 428 58.2
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 3.1e-137 492.7 457 58.2
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 2.0e-136 490.0 428 59.6
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 2.0e-136 490.0 410 61.2
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 2.7e-136 489.6 430 60.2
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 3.5e-136 489.2 407 61.9
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 4.5e-136 488.8 462 55.8
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 1.3e-135 487.3 459 58.0
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 1.7e-135 486.9 453 58.5
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 6.5e-135 485.0 423 61.0
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 1.9e-134 483.4 435 59.1
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 3.2e-134 482.6 430 59.3
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 4.2e-134 482.3 404 61.6
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 2.1e-133 479.9 453 58.1
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 8.0e-133 478.0 462 55.8
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.8e-132 476.9 430 58.8
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 3.0e-132 476.1 413 59.6
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 4.0e-132 475.7 453 57.6
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 1.2e-131 474.2 437 57.0
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 1.5e-131 473.8 380 63.4
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 6.3e-130 468.4 437 57.4
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 8.3e-130 468.0 449 56.1
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 2.4e-129 466.5 466 55.2
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 4.1e-129 465.7 446 56.7
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 5.4e-129 465.3 407 57.5
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 9.1e-129 464.5 466 54.7
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 3.5e-128 462.6 413 57.4
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 7.7e-128 461.5 379 63.3
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 2.3e-127 459.9 456 56.6
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 5.0e-127 458.8 377 61.8
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 1.1e-126 457.6 477 54.3
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.9e-126 456.8 451 55.0
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 8.0e-125 451.4 464 53.4
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 5.2e-124 448.7 443 55.3
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 4.9e-122 442.2 412 60.0
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 3.1e-121 439.5 360 63.3
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 3.8e-119 432.6 460 52.6
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 8.6e-119 431.4 424 54.5
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 3.5e-112 409.5 331 63.4
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 1.1e-108 397.9 358 56.7
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 2.6e-107 393.3 329 60.2
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 6.4e-106 388.7 333 62.2
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 1.4e-105 387.5 398 52.0
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 4.6e-104 382.5 436 49.1
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 1.4e-100 370.9 335 56.1
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 1.5e-94 350.9 402 46.8
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 1.9e-94 350.5 385 49.1
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 1.2e-93 347.8 294 59.9
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.1e-92 344.7 267 65.2
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 1.4e-92 344.4 429 45.2
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.8e-92 344.0 267 65.2
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.3e-90 337.8 295 58.3
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.1e-89 334.7 368 49.5
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 2.3e-87 327.0 543 38.3
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 8.7e-87 325.1 297 54.9
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 1.9e-86 323.9 434 43.5
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 3.3e-86 323.2 271 60.1
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 1.4e-81 307.8 231 65.8
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 3.2e-81 306.6 410 44.1
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 6.6e-79 298.9 335 49.0
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 6.0e-56 222.6 255 48.6
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.9e-47 193.4 140 68.6
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 2.0e-46 191.0 160 61.2
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.4e-39 168.3 170 52.4
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.5e-38 164.9 147 60.5
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 3.0e-31 140.6 155 50.3
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.6e-30 137.5 105 63.8
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 2.2e-29 134.4 145 47.6
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 2.2e-26 124.4 108 54.6
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.5e-25 121.7 91 63.7
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 9.4e-25 119.0 122 59.0
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.5e-22 111.7 95 61.1
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.3e-21 108.6 96 52.1


User provided reference genes

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