Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G25275 Arabidopsis thaliana HOM05D008027 ORTHO05D009737 3.1e-34 147.9 75 100.0
AL1G40080 Arabidopsis lyrata HOM05D008027 ORTHO05D009737 1.4e-29 132.5 75 89.3
CARHR026260 Cardamine hirsuta HOM05D008027 ORTHO05D009737 1.4e-29 132.5 75 89.3
Carub.0001s2529 Capsella rubella HOM05D008027 ORTHO05D009737 2.6e-28 128.3 75 85.3
BcaB03g12037 Brassica carinata HOM05D008027 ORTHO05D009737 2.8e-27 124.8 75 84.0
BraA08t34629Z Brassica rapa HOM05D008027 ORTHO05D009737 6.3e-27 123.6 75 82.7
BcaC01g01678 Brassica carinata HOM05D008027 ORTHO05D009737 1.8e-26 122.1 75 81.3
BolC3t19607H Brassica oleracea HOM05D008027 ORTHO05D009737 1.8e-26 122.1 75 81.3
Sp1g22980 Schrenkiella parvula HOM05D008027 ORTHO05D009737 7.0e-26 120.2 75 80.0
Thhalv10009240m.g Eutrema salsugineum HOM05D008027 ORTHO05D009737 2.0e-25 118.6 75 80.0
C03p73120 Brassica napus HOM05D008027 ORTHO05D009737 5.9e-25 117.1 64 90.6
A09p39140 Brassica napus HOM05D008027 ORTHO05D009737 7.7e-25 116.7 75 78.7
BraA09t39413Z Brassica rapa HOM05D008027 ORTHO05D009737 7.7e-25 116.7 75 78.7
A08p26830 Brassica napus HOM05D008027 ORTHO05D009737 1.3e-24 115.9 64 89.1
BcaC05g26684 Brassica carinata HOM05D008027 ORTHO05D009737 5.0e-24 114.0 68 83.8
BolC5t31257H Brassica oleracea HOM05D008027 ORTHO05D009737 5.0e-24 114.0 74 77.0
BcaC05g26480 Brassica carinata HOM05D008027 ORTHO05D009737 2.5e-23 111.7 74 75.7
Aa31LG7G9220 Aethionema arabicum HOM05D008027 ORTHO05D009737 4.7e-22 107.5 75 72.0
C05p25230 Brassica napus HOM05D008027 ORTHO05D009737 3.9e-21 104.4 63 81.0
CARHR026250 Cardamine hirsuta HOM05D008027 ORTHO05D009737 1.6e-17 92.4 71 69.0
BraA09t39415Z Brassica rapa HOM05D008027 ORTHO05D009737 1.2e-12 76.3 51 68.6
A09p39150 Brassica napus HOM05D008027 ORTHO05D009737 4.4e-12 74.3 52 67.3
Carub.0001s2528 Capsella rubella HOM05D008027 ORTHO05D009737 4.4e-12 74.3 71 54.9
Psat0s5304g0040 Pisum sativum HOM05D008027 ORTHO05D009737 1.6e-09 65.9 72 50.0
Lalb_Chr18g0060771 Lupinus albus HOM05D008027 ORTHO05D009737 1.7e-08 62.4 65 47.7
MD15G1417600 Malus domestica HOM05D008027 ORTHO05D009737 2.2e-08 62.0 33 75.8
Lj6g0012761 Lotus japonicus HOM05D008027 ORTHO05D009737 2.9e-08 61.6 66 51.5
QL07p009661 Quercus lobata HOM05D008027 ORTHO05D009737 2.9e-08 61.6 60 48.3
Medtr2g007950 Medicago truncatula HOM05D008027 ORTHO05D009737 3.8e-08 61.2 71 45.1
CANSAT11G0026 Cannabis sativa HOM05D008027 ORTHO05D009737 5.0e-08 60.8 66 47.0
Glyma.15G049600 Glycine max HOM05D008027 ORTHO05D009737 8.5e-08 60.1 63 52.4
Cfa005561 Carpinus fangiana HOM05D008027 ORTHO05D009737 1.5e-07 59.3 65 43.1
Dinv24246 Davidia involucrata HOM05D008027 ORTHO05D009737 1.5e-07 59.3 65 49.2
Prupe.1G561600 Prunus persica HOM05D008027 ORTHO05D009737 1.5e-07 59.3 59 45.8
CiPaw.05G041100 Carya illinoinensis HOM05D008027 ORTHO05D009737 2.5e-07 58.5 67 46.3
Glyma.08G183000 Glycine max HOM05D008027 ORTHO05D009737 3.2e-07 58.2 63 49.2
TPR.G19740 Trifolium pratense HOM05D008027 ORTHO05D009737 3.2e-07 58.2 70 45.7
TPR.G19754 Trifolium pratense HOM05D008027 ORTHO05D009737 3.2e-07 58.2 70 45.7
BraA07t29028Z Brassica rapa HOM05D008027 ORTHO05D009737 4.2e-07 57.8 76 46.1
RcHm_v2.0_Chr7g0224551 Rosa chinensis HOM05D008027 ORTHO05D009737 5.5e-07 57.4 60 46.7
Thhalv10009246m.g Eutrema salsugineum HOM05D008027 ORTHO05D009737 7.2e-07 57.0 41 75.6
BcaC06g35228 Brassica carinata HOM05D008027 ORTHO05D009737 9.4e-07 56.6 76 44.7
BolC7t42357H Brassica oleracea HOM05D008027 ORTHO05D009737 9.4e-07 56.6 76 44.7
Gohir.D04G171400 Gossypium hirsutum HOM05D008027 ORTHO05D009737 9.4e-07 56.6 65 50.8
Gorai.012G160300 Gossypium raimondii HOM05D008027 ORTHO05D009737 9.4e-07 56.6 65 50.8
Thecc.02G042600 Theobroma cacao HOM05D008027 ORTHO05D009737 9.4e-07 56.6 66 48.5
BcaB03g14026 Brassica carinata HOM05D008027 ORTHO05D009737 1.2e-06 56.2 76 44.7
Migut.N01020 Erythranthe guttata HOM05D008027 ORTHO05D009737 1.2e-06 56.2 64 42.2
Hma1.2p1_0557F.1_g178210 Hydrangea macrophylla HOM05D008027 ORTHO05D009737 1.6e-06 55.8 65 46.2
Prupe.4G249100 Prunus persica HOM05D008027 ORTHO05D009737 1.6e-06 55.8 33 66.7
Sopen01g047210 Solanum pennellii HOM05D011465 ORTHO05D009737 2.1e-06 55.5 64 40.6
CsaV3_3G018720 Cucumis sativus L. HOM05D008027 ORTHO05D009737 2.7e-06 55.1 54 48.1
Gohir.A04G126500 Gossypium hirsutum HOM05D008027 ORTHO05D009737 2.7e-06 55.1 65 49.2
Lsat_1_v5_gn_7_79741 Lactuca sativa HOM05D008027 ORTHO05D009737 3.6e-06 54.7 59 42.4
Nitab4.5_0002684g0120 Nicotiana tabacum HOM05D011465 ORTHO05D009737 3.6e-06 54.7 63 46.0
Solyc01g150164.1 Solanum lycopersicum HOM05D011465 ORTHO05D009737 4.7e-06 54.3 64 40.6
Sopen01g047250 Solanum pennellii HOM05D011465 ORTHO05D009737 4.7e-06 54.3 64 45.3
COL.COLO4_17908 Corchorus olitorius HOM05D008027 ORTHO05D009737 8.0e-06 53.5 66 48.5


User provided reference genes

Program Settings