Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G24062 Arabidopsis thaliana HOM05D011674 ORTHO05D013685 4.4e-52 207.6 99 100.0
AT5G54220 Arabidopsis thaliana HOM05D011674 ORTHO05D013685 2.3e-37 158.7 99 78.8
AL8G29490 Arabidopsis lyrata HOM05D011674 ORTHO05D013685 2.9e-32 141.7 100 74.0
Carub.0008s1454 Capsella rubella HOM05D011674 ORTHO05D013685 4.1e-26 121.3 103 61.2
A03p14740 Brassica napus HOM05D011674 ORTHO05D013685 1.6e-22 109.4 97 59.8
BraA03t10765Z Brassica rapa HOM05D011674 ORTHO05D013685 1.6e-22 109.4 97 59.8
BolC3t14136H Brassica oleracea HOM05D011674 ORTHO05D013685 1.1e-21 106.7 97 58.8
C03p17220 Brassica napus HOM05D011674 ORTHO05D013685 1.8e-21 105.9 97 58.8
Aa31LG3G10180 Aethionema arabicum HOM05D011674 ORTHO05D013685 1.1e-18 96.7 99 52.5
Thhalv10015265m.g Eutrema salsugineum HOM05D011674 ORTHO05D013685 1.5e-15 86.3 72 58.3
BcaB01g04284 Brassica carinata HOM05D011674 ORTHO05D013685 2.8e-14 82.0 92 50.0
BcaC01g06294 Brassica carinata HOM05D011674 ORTHO05D013685 3.6e-14 81.6 92 52.2
C03p17250 Brassica napus HOM05D011674 ORTHO05D013685 1.4e-13 79.7 92 51.1
A03p14760 Brassica napus HOM05D011674 ORTHO05D013685 8.9e-13 77.0 92 48.9
BraA03t10768Z Brassica rapa HOM05D011674 ORTHO05D013685 8.9e-13 77.0 92 48.9
CARHR267460 Cardamine hirsuta HOM05D011674 ORTHO05D013685 4.4e-12 74.7 55 60.0
AT2G25305 Arabidopsis thaliana HOM05D010512 ORTHO05D013732 3.2e-10 68.6 89 46.1
AL4G16670 Arabidopsis lyrata HOM05D010512 ORTHO05D013732 2.1e-09 65.9 89 44.9
AT5G54215 Arabidopsis thaliana HOM05D010512 ORTHO05D013732 2.1e-09 65.9 90 42.2
AL8G29460 Arabidopsis lyrata HOM05D010512 ORTHO05D013732 6.0e-09 64.3 90 43.3
Thhalv10015683m.g Eutrema salsugineum HOM05D010512 ORTHO05D013732 6.0e-09 64.3 90 43.3
Carub.0008s1455 Capsella rubella HOM05D047465 ORTHO05D038615 1.7e-08 62.8 69 50.7
AL8G29500 Arabidopsis lyrata HOM05D047465 ORTHO05D038615 2.3e-08 62.4 69 47.8
AL8G29480 Arabidopsis lyrata HOM05D010512 ORTHO05D013732 3.3e-07 58.5 89 38.2
C06p43370 Brassica napus HOM05D010512 ORTHO05D013732 4.3e-07 58.2 89 39.3
AT1G02940 Arabidopsis thaliana HOM05D000498 ORTHO05D000354 5.6e-07 57.8 68 48.5
BolC6t39414H Brassica oleracea HOM05D010512 ORTHO05D013732 1.6e-06 56.2 89 38.2
BolC7t40900H Brassica oleracea HOM05D010512 ORTHO05D028030 3.6e-06 55.1 91 39.6


User provided reference genes

Program Settings