Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 1.2e-178 629.8 320 100.0
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 3.1e-168 595.1 320 95.0
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 7.8e-151 537.3 324 87.0
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 8.9e-147 523.9 331 85.2
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 2.0e-146 522.7 325 84.3
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 2.4e-144 515.8 322 84.5
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 7.6e-138 494.2 328 77.7
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 7.6e-138 494.2 334 79.9
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 6.2e-132 474.6 334 77.8
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 6.2e-132 474.6 334 77.8
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 1.4e-128 463.4 332 76.5
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 2.7e-127 459.1 332 75.3
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 8.7e-126 454.1 332 74.4
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 5.8e-122 441.4 324 72.2
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 2.1e-116 422.9 325 70.2
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 6.1e-95 351.7 323 59.8
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 7.4e-93 344.7 316 57.9
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 9.7e-93 344.4 281 64.1
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.6e-92 343.6 281 64.1
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 2.8e-92 342.8 322 58.7
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 8.2e-92 341.3 300 62.0
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 1.8e-91 340.1 321 59.8
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 6.9e-91 338.2 324 58.0
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.5e-90 337.0 281 63.3
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 2.6e-90 336.3 266 64.7
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 5.9e-90 335.1 291 62.2
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 7.7e-90 334.7 262 66.0
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.8e-89 332.4 287 61.0
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 6.5e-89 331.6 275 61.8
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 8.5e-89 331.3 322 56.2
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 1.1e-88 330.9 232 68.5
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 9.4e-88 327.8 299 58.2
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 1.6e-87 327.0 320 56.9
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 1.6e-87 327.0 264 62.9
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 2.1e-87 326.6 269 62.8
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 2.1e-87 326.6 232 68.5
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 2.1e-87 326.6 326 54.3
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 6.1e-87 325.1 326 55.5
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 6.1e-87 325.1 245 67.3
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 1.4e-86 323.9 323 55.1
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 3.0e-86 322.8 255 63.9
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 2.6e-85 319.7 237 65.8
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 3.3e-85 319.3 239 64.4
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 5.7e-85 318.5 351 51.6
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 9.7e-85 317.8 308 53.2
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 9.7e-85 317.8 245 64.5
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 1.7e-84 317.0 301 56.8
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 1.1e-83 314.3 304 56.6
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 1.4e-83 313.9 331 53.5
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 3.1e-83 312.8 302 55.0
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 9.1e-83 311.2 302 55.0
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 9.1e-83 311.2 246 62.2
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 1.2e-82 310.8 306 56.5
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 1.2e-82 310.8 352 52.8
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 7.7e-82 308.1 306 54.9
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 1.0e-81 307.8 274 56.2
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 2.2e-81 306.6 233 64.8
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 3.8e-81 305.8 331 52.3
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 5.0e-81 305.4 311 54.0
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 5.0e-81 305.4 329 52.9
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 6.5e-81 305.1 336 52.4
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 8.5e-81 304.7 313 54.3
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 2.5e-80 303.1 282 56.4
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 5.5e-80 302.0 319 53.0
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 7.2e-80 301.6 269 57.2
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 7.2e-80 301.6 308 54.9
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 9.4e-80 301.2 306 53.9
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 1.6e-79 300.4 311 54.0
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.7e-79 299.7 329 52.9
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 3.6e-79 299.3 246 61.0
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 2.3e-78 296.6 244 61.5
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 5.2e-78 295.4 301 54.2
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 8.8e-78 294.7 321 51.1
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 2.6e-77 293.1 268 56.3
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 3.7e-76 289.3 270 53.7
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 4.8e-76 288.9 323 51.1
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 3.1e-75 286.2 278 56.8
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 4.1e-75 285.8 304 53.6
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 5.3e-75 285.4 300 53.0
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 1.2e-74 284.3 270 55.6
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 2.6e-74 283.1 360 46.1
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 3.5e-74 282.7 248 56.5
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 1.3e-73 280.8 260 58.1
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 1.3e-73 280.8 222 59.5
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 1.7e-73 280.4 231 60.2
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 1.7e-73 280.4 284 53.5
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 1.5e-72 277.3 324 49.4
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 1.9e-72 276.9 294 53.7
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 3.2e-72 276.2 326 49.1
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 1.2e-71 274.2 299 51.8
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 2.1e-71 273.5 302 51.7
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.6e-71 272.7 270 54.8
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 6.1e-71 271.9 243 55.6
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 1.4e-70 270.8 241 56.8
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 3.7e-68 262.7 287 52.6
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 3.7e-68 262.7 212 63.2
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 6.3e-68 261.9 267 53.9
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 4.1e-67 259.2 233 57.1
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 2.9e-65 253.1 187 63.6
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 7.2e-64 248.4 216 57.4
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 6.1e-63 245.4 304 46.1
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 1.2e-61 241.1 308 44.2
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 2.8e-55 219.9 194 57.2
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 4.0e-54 216.1 187 59.4
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 4.0e-54 216.1 233 51.9
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 6.8e-54 215.3 198 57.1
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 8.8e-54 214.9 212 50.5
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 9.8e-53 211.5 216 50.5
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 3.1e-51 206.5 155 65.8
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 4.7e-47 192.6 334 38.3
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 6.1e-47 192.2 164 59.1
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 5.2e-46 189.1 232 48.3
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 1.3e-44 184.5 214 45.3
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 8.3e-44 181.8 232 44.0
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 2.8e-39 166.8 215 42.3
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 3.6e-39 166.4 213 44.1
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 3.6e-39 166.4 213 44.1
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 1.7e-36 157.5 232 40.9
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 7.0e-35 152.1 202 40.6
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 1.7e-25 120.9 186 39.8
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 4.3e-24 116.3 77 75.3
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 9.5e-24 115.2 97 59.8
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 1.6e-23 114.4 282 32.3
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 1.7e-12 77.8 85 49.4
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 8.1e-07 58.9 238 22.3
PRCOL_00005055 Prasinoderma coloniale HOM05D006231 ORTHO05D007857 3.1e-06 57.0 155 26.5


User provided reference genes

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