Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G23610 Arabidopsis thaliana HOM05D000693 ORTHO05D023638 5.8e-39 163.7 79 100.0
AL1G37380 Arabidopsis lyrata HOM05D000693 ORTHO05D023638 1.9e-26 122.1 76 73.7
Carub.0001s2315 Capsella rubella HOM05D000693 ORTHO05D002444 9.9e-23 109.8 76 68.4
CARHR024000 Cardamine hirsuta HOM05D000693 ORTHO05D002444 3.0e-19 98.2 77 64.9
CARHR024020 Cardamine hirsuta HOM05D000693 ORTHO05D023638 9.6e-18 93.2 76 64.5
AT1G23645 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 7.9e-12 73.6 86 50.0
AL1G37410 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 1.8e-11 72.4 74 55.4
Thhalv10028680m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 8.7e-11 70.1 81 49.4
Sp1g21010 Schrenkiella parvula HOM05D000693 ORTHO05D002444 7.4e-10 67.0 83 51.8
BcaC06g35045 Brassica carinata HOM05D000693 ORTHO05D002444 2.8e-09 65.1 84 47.6
C07p20380 Brassica napus HOM05D000693 ORTHO05D002444 2.8e-09 65.1 84 47.6
AT1G23600 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 2.4e-08 62.0 69 49.3
Sp6g05890 Schrenkiella parvula HOM05D000693 ORTHO05D002444 5.3e-08 60.8 48 62.5
Sp1g21090 Schrenkiella parvula HOM05D000693 ORTHO05D002444 6.9e-08 60.5 73 45.2
AL1G37440 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 9.0e-08 60.1 74 48.6
BcaB03g14141 Brassica carinata HOM05D000693 ORTHO05D002444 9.0e-08 60.1 70 51.4
BcaNung00292 Brassica carinata HOM05D000693 ORTHO05D002444 2.0e-07 58.9 40 70.0
Thhalv10009760m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 2.0e-07 58.9 76 47.4
AL1G37390 Arabidopsis lyrata HOM05D000693 ORTHO05D023638 2.6e-07 58.5 73 45.2
BcaB03g14142 Brassica carinata HOM05D000693 ORTHO05D002444 2.6e-07 58.5 84 44.0
Sp1g21050 Schrenkiella parvula HOM05D000693 ORTHO05D002444 3.4e-07 58.2 43 62.8
BcaC07g39209 Brassica carinata HOM05D000693 ORTHO05D018669 4.5e-07 57.8 59 55.9
BolC8t49842H Brassica oleracea HOM05D000693 ORTHO05D002444 5.8e-07 57.4 75 46.7
Carub.0001s2316 Capsella rubella HOM05D000693 ORTHO05D002444 5.8e-07 57.4 40 67.5
A08p28120 Brassica napus HOM05D000693 ORTHO05D018669 7.6e-07 57.0 40 70.0
BraA08t34745Z Brassica rapa HOM05D000693 ORTHO05D018669 7.6e-07 57.0 40 70.0
Thhalv10010034m.g Eutrema salsugineum HOM05D000693 ORTHO05D002444 7.6e-07 57.0 44 65.9
AL1G37430 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 9.9e-07 56.6 82 42.7
BraA08t34744Z Brassica rapa HOM05D000693 ORTHO05D002444 9.9e-07 56.6 75 45.3
BcaC07g39211 Brassica carinata HOM05D000693 ORTHO05D002444 1.3e-06 56.2 40 67.5
C08p22070 Brassica napus HOM05D000693 ORTHO05D002444 1.3e-06 56.2 40 67.5
BolC5t30989H Brassica oleracea HOM05D000693 ORTHO05D002444 1.3e-06 56.2 40 65.0
BolC8t49851H Brassica oleracea HOM05D000693 ORTHO05D002444 1.3e-06 56.2 40 67.5
C08p21970 Brassica napus HOM05D000693 ORTHO05D018669 1.7e-06 55.8 40 67.5
BolC8t49833H Brassica oleracea HOM05D000693 ORTHO05D018669 1.7e-06 55.8 40 67.5
Sp1g21060 Schrenkiella parvula HOM05D000693 ORTHO05D002444 1.7e-06 55.8 40 67.5
C05p22900 Brassica napus HOM05D000693 ORTHO05D002444 2.2e-06 55.5 40 65.0
Carub.0001s2317 Capsella rubella HOM05D000693 ORTHO05D002444 2.2e-06 55.5 86 41.9
BcaB07g32346 Brassica carinata HOM05D000693 ORTHO05D002444 2.9e-06 55.1 40 65.0
A09p41110 Brassica napus HOM05D000693 ORTHO05D002444 2.9e-06 55.1 59 52.5
C07p20370 Brassica napus HOM05D000693 ORTHO05D002444 2.9e-06 55.1 84 45.2
BraA09t39603Z Brassica rapa HOM05D000693 ORTHO05D002444 2.9e-06 55.1 59 52.5
Sp1g21000 Schrenkiella parvula HOM05D000693 ORTHO05D002444 2.9e-06 55.1 77 45.5
A08p28100 Brassica napus HOM05D000693 ORTHO05D002444 4.9e-06 54.3 40 65.0
BraA08t34738Z Brassica rapa HOM05D000693 ORTHO05D002444 4.9e-06 54.3 40 65.0
AL4G22700 Arabidopsis lyrata HOM05D000693 ORTHO05D002444 6.4e-06 53.9 84 45.2
AT2G27670 Arabidopsis thaliana HOM05D000693 ORTHO05D002444 8.4e-06 53.5 51 60.8
BolC7t42558H Brassica oleracea HOM05D000693 ORTHO05D002444 8.4e-06 53.5 82 45.1


User provided reference genes

Program Settings