Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 3.1e-112 408.7 234 100.0
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 2.8e-97 359.0 227 91.2
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 1.1e-96 357.1 226 91.6
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 2.2e-86 322.8 227 78.4
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 8.1e-81 304.3 226 73.0
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 1.5e-79 300.1 223 80.3
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.3e-73 280.4 237 75.1
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 1.8e-72 276.6 222 66.7
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 5.3e-64 248.4 189 81.0
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 4.5e-63 245.4 218 69.3
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 1.4e-56 223.8 227 68.7
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 7.7e-47 191.4 220 51.4
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 1.1e-45 187.6 231 45.0
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 1.3e-38 164.1 231 45.0
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.9e-38 162.9 231 41.1
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 3.8e-38 162.5 238 40.8
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 3.8e-38 162.5 231 43.7
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 8.5e-38 161.4 228 43.9
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 5.5e-37 158.7 230 43.0
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 5.5e-37 158.7 225 41.8
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 7.2e-37 158.3 235 46.0
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 6.1e-36 155.2 228 42.1
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 1.4e-35 154.1 231 40.7
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 3.9e-35 152.5 221 42.5
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 2.6e-34 149.8 242 39.3
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.7e-33 147.1 238 40.8
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 1.2e-31 141.0 229 40.2
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 1.7e-30 137.1 248 36.7
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 1.7e-30 137.1 239 36.4
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 6.5e-30 135.2 118 56.8
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 1.1e-29 134.4 237 47.7
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.5e-29 134.0 243 35.8
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 1.5e-29 134.0 235 37.9
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 7.2e-29 131.7 230 38.3
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 9.4e-29 131.3 238 37.0
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 2.7e-28 129.8 244 34.4
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 6.1e-28 128.6 244 36.9
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 1.4e-27 127.5 224 37.5
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 2.3e-27 126.7 189 40.7
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 3.0e-27 126.3 235 37.4
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 3.0e-27 126.3 247 36.0
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 1.2e-26 124.4 118 55.1
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 4.4e-26 122.5 231 36.8
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 5.7e-26 122.1 244 36.1
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 5.7e-26 122.1 226 36.3
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 7.5e-26 121.7 244 35.2
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 9.7e-26 121.3 244 35.7
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.7e-25 120.6 232 34.5
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 3.7e-25 119.4 237 45.6
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 8.2e-25 118.2 187 36.9
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 1.4e-24 117.5 241 37.3
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 7.0e-24 115.2 207 36.2
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 9.1e-24 114.8 271 40.2
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 1.2e-23 114.4 225 36.4
BolC5t30769H Brassica oleracea HOM05D005772 ORTHO05D006468 5.0e-22 109.0 226 39.8
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 5.0e-22 109.0 237 35.0
BraA07t29240Z Brassica rapa HOM05D005772 ORTHO05D006468 1.9e-21 107.1 222 38.3
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.9e-21 107.1 235 34.0
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 9.4e-21 104.8 207 32.4
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 1.2e-20 104.4 236 41.5
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 4.7e-20 102.4 192 35.9
BcaB03g14256 Brassica carinata HOM05D002121 ORTHO05D004000 1.0e-19 101.3 120 51.7
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 2.3e-19 100.1 219 32.4
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 1.5e-18 97.4 206 34.5
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 9.8e-18 94.7 205 35.6
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 2.2e-17 93.6 238 40.3
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 1.2e-15 87.8 238 41.2
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 2.0e-15 87.0 192 32.8
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 2.7e-15 86.7 118 37.3
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 1.3e-14 84.3 118 36.4
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.7e-14 84.0 118 38.1
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.7e-14 84.0 118 38.1
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 2.3e-14 83.6 118 38.1
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 2.3e-14 83.6 118 36.4
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 2.5e-13 80.1 118 35.6
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 2.5e-13 80.1 66 53.0
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 3.2e-13 79.7 118 36.4
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 4.2e-13 79.3 118 36.4
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 5.5e-13 79.0 56 57.1
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 7.2e-13 78.6 118 33.9
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 7.2e-13 78.6 118 34.7
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 7.2e-13 78.6 118 37.3
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.2e-12 77.8 118 33.1
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 2.8e-12 76.6 118 34.7
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 4.7e-12 75.9 118 34.7
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 4.7e-12 75.9 118 34.7
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 4.7e-12 75.9 239 28.9
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 6.1e-12 75.5 118 34.7
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.0e-11 74.7 226 27.9
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 3.0e-11 73.2 124 34.7
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 5.2e-11 72.4 118 32.2
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 8.8e-11 71.6 118 32.2
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 1.2e-10 71.2 118 32.2
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 2.0e-10 70.5 177 32.2
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 2.6e-10 70.1 118 32.2
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 2.6e-10 70.1 118 33.1
BolC5t30910H Brassica oleracea HOM05D002121 ORTHO05D039495 3.4e-10 69.7 41 78.0
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 3.4e-10 69.7 118 33.1
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 3.4e-10 69.7 118 32.2
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 9.8e-10 68.2 187 25.7
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.3e-09 67.8 57 54.4
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 1.7e-09 67.4 118 32.2
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.8e-09 66.6 118 33.1
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 3.7e-09 66.2 103 33.0
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 3.7e-09 66.2 118 33.1
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 3.7e-09 66.2 118 33.1
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 3.7e-09 66.2 118 33.1
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 3.7e-09 66.2 118 33.1
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 4.9e-09 65.9 118 33.1
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 6.3e-09 65.5 118 32.2
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 8.3e-09 65.1 223 29.1
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 1.1e-08 64.7 118 30.5
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 4.1e-08 62.8 234 25.6
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 5.4e-08 62.4 175 34.3
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 5.4e-08 62.4 118 30.5
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 9.2e-08 61.6 216 26.4
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 2.0e-07 60.5 118 31.4
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.0e-07 60.5 118 31.4
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 2.0e-07 60.5 228 26.3
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 4.5e-07 59.3 56 42.9
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 1.3e-06 57.8 182 27.5
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 1.3e-06 57.8 65 40.0
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 6.6e-06 55.5 118 28.0


User provided reference genes

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