Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G21500 Arabidopsis thaliana HOM05D007607 ORTHO05D009603 3.1e-50 201.8 127 100.0
AL1G34640 Arabidopsis lyrata HOM05D007607 ORTHO05D009603 2.2e-48 195.7 127 96.1
CARHR021860 Cardamine hirsuta HOM05D007607 ORTHO05D009603 2.1e-43 179.1 124 89.5
Carub.0001s2092 Capsella rubella HOM05D007607 ORTHO05D009603 1.3e-40 169.9 124 83.1
BcaB07g32146 Brassica carinata HOM05D007607 ORTHO05D009603 2.1e-35 152.5 124 75.8
BraA06t24849Z Brassica rapa HOM05D007607 ORTHO05D009603 1.4e-34 149.8 123 75.6
A06p17530 Brassica napus HOM05D007607 ORTHO05D009603 5.3e-34 147.9 123 74.8
A07p15130 Brassica napus HOM05D007607 ORTHO05D009603 2.6e-33 145.6 124 73.4
BcaC06g34863 Brassica carinata HOM05D007607 ORTHO05D009603 1.7e-32 142.9 124 74.2
BolC7t42778H Brassica oleracea HOM05D007607 ORTHO05D009603 1.7e-32 142.9 124 74.2
Sp1g19030 Schrenkiella parvula HOM05D007607 ORTHO05D009603 1.7e-32 142.9 115 80.0
BcaB03g14267 Brassica carinata HOM05D007607 ORTHO05D009603 2.2e-32 142.5 124 73.4
BcaC05g26059 Brassica carinata HOM05D007607 ORTHO05D009603 2.4e-31 139.0 126 73.0
C07p22190 Brassica napus HOM05D007607 ORTHO05D009603 2.4e-31 139.0 124 73.4
BolC5t30734H Brassica oleracea HOM05D007607 ORTHO05D009603 2.4e-31 139.0 126 73.0
Thhalv10009074m.g Eutrema salsugineum HOM05D007607 ORTHO05D009603 3.2e-31 138.7 117 76.1
C05p20400 Brassica napus HOM05D007607 ORTHO05D009603 7.1e-31 137.5 126 72.2
Aa31LG7G5390 Aethionema arabicum HOM05D007607 ORTHO05D009603 1.3e-27 126.7 114 71.9
THA.LOC104813690 Tarenaya hassleriana HOM05D007607 ORTHO05D009603 1.9e-20 102.8 126 61.1
Gohir.D10G121500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 9.1e-10 67.4 133 47.4
Gorai.011G133600 Gossypium raimondii HOM05D007607 ORTHO05D009603 9.1e-10 67.4 133 47.4
Ciclev10022842m.g Citrus clementina HOM05D007607 ORTHO05D009603 3.4e-09 65.5 77 62.3
QL10p057428 Quercus lobata HOM05D007607 ORTHO05D009603 3.4e-09 65.5 79 59.5
QL10p057723 Quercus lobata HOM05D007607 ORTHO05D009603 3.4e-09 65.5 79 63.3
Gohir.A10G145500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 5.9e-09 64.7 133 46.6
Eucgr.H00285 Eucalyptus grandis HOM05D007607 ORTHO05D009603 1.7e-08 63.2 125 53.6
Lj4g0023803 Lotus japonicus HOM05D007607 ORTHO05D009603 1.7e-08 63.2 130 46.2
MD02G1004100 Malus domestica HOM05D007607 ORTHO05D009603 2.2e-08 62.8 81 61.7
Atru.chr4.1510 Acer truncatum HOM05D007607 ORTHO05D009603 5.0e-08 61.6 85 55.3
Haze_01353 Corylus avellana HOM05D007607 ORTHO05D009603 5.0e-08 61.6 77 58.4
Glyma.07G206400 Glycine max HOM05D007607 ORTHO05D009603 5.0e-08 61.6 119 52.1
Rhsim02G0085800 Rhododendron simsii HOM05D007607 ORTHO05D009603 5.0e-08 61.6 77 62.3
Atru.chr4.1481 Acer truncatum HOM05D007607 ORTHO05D009603 8.5e-08 60.8 85 55.3
CAN.G1237.5 Capsicum annuum HOM05D007607 ORTHO05D009603 1.1e-07 60.5 80 58.8
RhsimUnG0015300 Rhododendron simsii HOM05D007607 ORTHO05D009603 1.4e-07 60.1 88 56.8
arahy.Tifrunner.gnm1.ann1.RJI6AK Arachis hypogaea HOM05D007607 ORTHO05D009603 1.9e-07 59.7 78 60.3
Cfa015274 Carpinus fangiana HOM05D007607 ORTHO05D009603 1.9e-07 59.7 77 45.5
Duzib212G0637 Durio zibethinus HOM05D007607 ORTHO05D009603 1.9e-07 59.7 132 41.7
Actinidia28975 Actinidia chinensis HOM05D007607 ORTHO05D009603 2.5e-07 59.3 125 37.6
MD15G1147800 Malus domestica HOM05D007607 ORTHO05D009603 2.5e-07 59.3 80 62.5
Sopen12g009810 Solanum pennellii HOM05D007607 ORTHO05D009603 2.5e-07 59.3 79 62.0
Cpa.g.sc343.4 Carica papaya HOM05D007607 ORTHO05D009603 3.2e-07 58.9 37 83.8
Peaxi162Scf00883g00099 Petunia axillaris HOM05D007607 ORTHO05D009603 3.2e-07 58.9 117 50.4
Glyma.02G138600 Glycine max HOM05D007607 ORTHO05D009603 4.2e-07 58.5 106 52.8
Manes.05G131900 Manihot esculenta HOM05D007607 ORTHO05D009603 4.2e-07 58.5 129 48.1
Solyc12g019550.2 Solanum lycopersicum HOM05D007607 ORTHO05D009603 4.2e-07 58.5 79 60.8
MSTRG.22043 Avicennia marina HOM05D007607 ORTHO05D009603 5.5e-07 58.2 121 45.5
HanXRQChr02g0059081 Helianthus annuus HOM05D007607 ORTHO05D009603 5.5e-07 58.2 121 52.1
Dinv18311 Davidia involucrata HOM05D007607 ORTHO05D009603 7.2e-07 57.8 79 53.2
Nitab4.5_0008331g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.2e-07 57.8 125 51.2
SalBow6G6796 Salvia bowleyana HOM05D007607 ORTHO05D009603 7.2e-07 57.8 81 55.6
Aqoxy2G03795 Aquilegia oxysepala HOM05D007607 ORTHO05D009603 9.4e-07 57.4 106 50.0
Potri.013G128700 Populus trichocarpa HOM05D007607 ORTHO05D009603 9.4e-07 57.4 134 44.0
PGR142G0203 Punica granatum HOM05D007607 ORTHO05D009603 9.4e-07 57.4 140 45.7
DCAR_005451 Daucus carota HOM05D007607 ORTHO05D009603 1.2e-06 57.0 76 52.6
Lalb_Chr16g0384371 Lupinus albus HOM05D007607 ORTHO05D009603 1.2e-06 57.0 84 54.8
Prupe.7G267000 Prunus persica HOM05D007607 ORTHO05D009603 1.2e-06 57.0 84 59.5
PGSC0003DMG400029159 Solanum tuberosum HOM05D007607 ORTHO05D009603 1.2e-06 57.0 38 81.6
MSTRG.24562 Avicennia marina HOM05D007607 ORTHO05D009603 1.6e-06 56.6 76 60.5
CiPaw.01G169900 Carya illinoinensis HOM05D007607 ORTHO05D009603 1.6e-06 56.6 77 54.5
CiPaw.02G100000 Carya illinoinensis HOM05D007607 ORTHO05D009603 1.6e-06 56.6 77 53.2
Os09g0517000 Oryza sativa ssp. japonica HOM05D007607 ORTHO05D009603 1.6e-06 56.6 36 80.6
CANSAT56G1551 Cannabis sativa HOM05D007607 ORTHO05D009603 2.1e-06 56.2 83 51.8
RcHm_v2.0_Chr2g0085131 Rosa chinensis HOM05D007607 ORTHO05D009603 2.1e-06 56.2 38 78.9
Cc03_g14540 Coffea canephora HOM05D007607 ORTHO05D009603 2.7e-06 55.8 76 59.2
TWI15G0968 Tripterygium wilfordii HOM05D007607 ORTHO05D009603 2.7e-06 55.8 36 80.6
ClCG11G013470 Citrullus lanatus HOM05D007607 ORTHO05D009603 3.6e-06 55.5 82 58.5
TAR362G0213 Trochodendron aralioides HOM05D007607 ORTHO05D009603 4.7e-06 55.1 79 58.2
CSS0042213 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 6.1e-06 54.7 109 49.5
Thecc.04G162800 Theobroma cacao HOM05D007607 ORTHO05D009603 6.1e-06 54.7 128 41.4
ECA233G0487 Erigeron canadensis HOM05D007607 ORTHO05D009603 7.9e-06 54.3 102 40.2
PSO017G0391 Papaver somniferum HOM05D007607 ORTHO05D009603 7.9e-06 54.3 77 44.2


User provided reference genes

Program Settings