Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 6.7e-201 703.7 343 100.0
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 7.5e-184 647.1 342 91.8
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 1.8e-174 615.9 344 86.3
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 4.5e-173 611.3 344 86.3
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 2.1e-170 602.4 345 84.6
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 4.9e-167 591.3 300 93.7
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 5.4e-166 587.8 342 83.0
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 2.1e-162 575.9 347 81.6
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 6.2e-162 574.3 348 81.6
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 6.2e-162 574.3 348 81.6
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 8.0e-162 573.9 343 81.9
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 1.4e-161 573.2 348 81.3
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 1.5e-160 569.7 344 81.4
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 1.1e-158 563.5 349 79.1
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 9.2e-158 560.5 343 80.5
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 3.3e-155 552.0 322 82.9
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 6.2e-146 521.2 346 74.6
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 2.4e-145 519.2 344 73.5
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 1.3e-143 513.5 323 78.6
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 2.9e-143 512.3 346 73.7
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 3.8e-143 511.9 343 74.9
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 4.9e-143 511.5 347 73.8
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 1.4e-142 510.0 349 72.5
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 1.9e-142 509.6 347 73.2
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 1.2e-141 506.9 341 74.2
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.6e-141 506.5 344 73.8
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 2.7e-141 505.8 348 71.8
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 3.5e-141 505.4 344 73.5
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 4.6e-141 505.0 342 72.8
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 4.6e-141 505.0 345 72.2
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 7.8e-141 504.2 350 72.6
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 7.8e-141 504.2 347 70.3
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.0e-140 503.8 346 73.1
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 1.3e-140 503.4 349 73.4
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 2.3e-140 502.7 338 73.4
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 3.0e-140 502.3 343 70.8
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 6.6e-140 501.1 343 73.2
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 8.7e-140 500.7 341 73.0
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 8.7e-140 500.7 346 71.7
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 1.1e-139 500.4 349 72.8
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 1.5e-139 500.0 350 72.3
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 5.6e-139 498.0 341 72.4
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 7.3e-139 497.7 349 71.3
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 9.6e-139 497.3 343 72.6
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 1.2e-138 496.9 347 69.2
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 1.6e-138 496.5 343 70.6
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 2.8e-138 495.7 340 74.4
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 4.7e-138 495.0 338 72.5
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 8.1e-138 494.2 340 72.6
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 8.1e-138 494.2 340 74.4
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 1.8e-137 493.0 352 69.6
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 2.4e-137 492.7 349 70.5
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 6.9e-137 491.1 364 67.6
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.5e-136 490.0 346 70.8
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.5e-136 490.0 347 71.2
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 2.0e-136 489.6 353 69.4
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 2.0e-136 489.6 378 66.1
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 2.0e-136 489.6 346 70.8
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 2.6e-136 489.2 346 70.2
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 2.6e-136 489.2 338 71.0
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 4.4e-136 488.4 353 69.1
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.4e-136 488.4 346 70.5
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 4.4e-136 488.4 346 70.8
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 7.6e-136 487.6 350 71.4
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 7.6e-136 487.6 374 67.1
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 9.9e-136 487.3 350 70.6
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.2e-135 486.1 346 70.2
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 2.2e-135 486.1 346 69.9
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 2.2e-135 486.1 346 72.3
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 8.4e-135 484.2 346 71.1
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 5.4e-134 481.5 344 70.1
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 5.4e-134 481.5 345 69.6
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 7.1e-134 481.1 347 70.0
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 7.1e-134 481.1 341 70.1
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 7.1e-134 481.1 341 69.8
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 2.1e-133 479.6 344 69.5
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 7.8e-133 477.6 345 69.3
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 1.0e-132 477.2 402 60.9
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.3e-132 476.9 350 70.3
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 3.9e-132 475.3 345 68.7
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 1.5e-131 473.4 346 69.1
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 3.3e-131 472.2 344 68.3
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 6.2e-130 468.0 346 67.3
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 1.4e-129 466.8 343 67.6
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 3.1e-129 465.7 338 69.2
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 3.1e-129 465.7 340 70.0
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 6.9e-129 464.5 346 67.6
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 6.9e-129 464.5 331 71.0
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 9.0e-129 464.2 327 69.7
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 9.9e-128 460.7 340 69.1
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 2.2e-127 459.5 349 65.9
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 4.9e-127 458.4 343 67.3
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 8.4e-127 457.6 323 73.1
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 3.2e-126 455.7 344 66.6
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 3.2e-126 455.7 346 66.5
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 1.6e-125 453.4 343 66.2
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 1.0e-124 450.7 346 66.8
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 2.3e-124 449.5 293 72.7
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 6.7e-124 448.0 339 65.8
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 3.3e-123 445.7 341 66.0
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 1.3e-122 443.7 340 62.9
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 1.4e-121 440.3 301 72.1
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 1.5e-115 420.2 338 63.3
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 4.8e-114 415.2 248 77.4
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 1.2e-112 410.6 234 81.2
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 4.9e-111 405.2 248 75.0
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.1e-110 404.1 248 74.6
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 7.4e-107 391.3 233 81.1
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 6.5e-103 378.3 303 63.0
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 1.8e-100 370.2 332 59.3
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 6.3e-98 361.7 330 57.0
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 5.0e-95 352.1 251 73.7
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 1.4e-89 334.0 245 64.1
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 5.2e-84 315.5 324 51.5
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 3.3e-83 312.8 241 68.0
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.2e-80 304.3 243 66.3
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.2e-80 304.3 243 66.3
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 1.6e-80 303.9 233 68.2
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.9e-78 297.0 242 65.7
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 2.2e-66 256.9 175 71.4
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 9.5e-62 241.5 244 49.2
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.7e-58 230.7 162 69.1
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.5e-54 217.6 191 60.7
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 4.3e-54 216.1 191 61.8
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 7.3e-54 215.3 218 52.3
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 3.1e-52 209.9 183 54.6
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.6e-48 197.6 185 55.7
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 7.6e-27 125.6 73 80.8
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 1.1e-25 121.7 79 72.2
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 8.4e-18 95.5 59 67.8
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 1.2e-08 65.1 53 62.3


User provided reference genes

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