Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G18486 Arabidopsis thaliana HOM05D008592 ORTHO05D010654 1.1e-60 236.5 119 100.0
Carub.0001s1811 Capsella rubella HOM05D008592 ORTHO05D010654 1.2e-48 196.4 118 83.9
AL6G50390 Arabidopsis lyrata HOM05D008592 ORTHO05D010654 6.9e-44 180.6 121 76.9
AT4G02655 Arabidopsis thaliana HOM05D008592 ORTHO05D010654 1.3e-42 176.4 122 76.2
Carub.0006s3447 Capsella rubella HOM05D008592 ORTHO05D010654 4.2e-41 171.4 115 75.7
BcaB07g31858 Brassica carinata HOM05D008592 ORTHO05D010654 6.2e-37 157.5 121 72.7
C05p16740 Brassica napus HOM05D002563 ORTHO05D006856 5.3e-36 154.5 122 69.7
BcaC05g25743 Brassica carinata HOM05D008592 ORTHO05D010654 1.2e-35 153.3 122 68.9
BolC5t30374H Brassica oleracea HOM05D000001 ORTHO05D000003 1.2e-35 153.3 122 68.9
Sp2g22090 Schrenkiella parvula HOM05D008592 ORTHO05D010654 4.5e-35 151.4 123 59.3
Thhalv10005430m.g Eutrema salsugineum HOM05D008592 ORTHO05D010654 4.9e-34 147.9 123 56.9
Carub.0006s2325 Capsella rubella HOM05D008592 ORTHO05D010654 4.2e-33 144.8 124 61.3
Aa31LG11G4830 Aethionema arabicum HOM05D008592 ORTHO05D010654 2.1e-32 142.5 117 59.8
Aa31LG3G350 Aethionema arabicum HOM05D008592 ORTHO05D010654 5.1e-31 137.9 119 58.8
Aa31LG8G11200 Aethionema arabicum HOM05D008592 ORTHO05D010654 4.5e-27 124.8 119 52.1
Sp5g29200 Schrenkiella parvula HOM05D008592 ORTHO05D010654 1.1e-25 120.2 119 55.5
BcaB03g15360 Brassica carinata HOM05D008592 ORTHO05D010654 2.7e-24 115.5 101 53.5
Thhalv10019436m.g Eutrema salsugineum HOM05D008592 ORTHO05D010654 1.0e-23 113.6 94 57.4
THA.LOC104812121 Tarenaya hassleriana HOM05D008592 ORTHO05D010654 1.0e-23 113.6 118 50.0
BcaB01g01198 Brassica carinata HOM05D008592 ORTHO05D010654 1.8e-23 112.8 83 62.7
Thhalv10019576m.g Eutrema salsugineum HOM05D008592 ORTHO05D010654 3.0e-23 112.1 121 53.7
BcaC08g46830 Brassica carinata HOM05D008592 ORTHO05D010654 7.4e-22 107.5 119 52.9
C06p48100 Brassica napus HOM05D008592 ORTHO05D010654 1.6e-21 106.3 119 52.1
BolC6t39847H Brassica oleracea HOM05D008592 ORTHO05D010654 1.6e-21 106.3 119 52.1
A07p39870 Brassica napus HOM05D008592 ORTHO05D010654 2.2e-21 105.9 118 50.8
BraA07t31533Z Brassica rapa HOM05D008592 ORTHO05D010654 2.2e-21 105.9 118 50.8
A06p27880 Brassica napus HOM05D008592 ORTHO05D010654 3.7e-21 105.1 100 51.0
C06p33650 Brassica napus HOM05D002016 ORTHO05D002251 4.8e-21 104.8 95 52.6
A06p27870 Brassica napus HOM05D008592 ORTHO05D010654 8.2e-21 104.0 102 50.0
C03p66030 Brassica napus HOM05D008592 ORTHO05D010654 1.1e-20 103.6 100 51.0
BraA06t25728Z Brassica rapa HOM05D008592 ORTHO05D010654 1.1e-20 103.6 100 50.0
BcaC01g02372 Brassica carinata HOM05D008592 ORTHO05D010654 3.1e-20 102.1 100 50.0
C03p66040 Brassica napus HOM05D008592 ORTHO05D010654 3.1e-20 102.1 100 50.0
BolC3t18866H Brassica oleracea HOM05D008592 ORTHO05D010654 3.1e-20 102.1 100 50.0
Carub.0007s2647 Capsella rubella HOM05D008592 ORTHO05D010654 3.1e-20 102.1 120 46.7
BraA06t25727Z Brassica rapa HOM05D008592 ORTHO05D010654 5.3e-20 101.3 100 50.0
BcaB03g15739 Brassica carinata HOM05D008592 ORTHO05D010654 1.2e-19 100.1 119 46.2
A07p29560 Brassica napus HOM05D008592 ORTHO05D010654 2.1e-16 89.4 79 54.4
BcaC05g28306 Brassica carinata HOM05D008592 ORTHO05D010654 1.3e-10 70.1 101 37.6
Psat5g117360 Pisum sativum HOM05D008592 ORTHO05D010654 2.2e-10 69.3 119 33.6
arahy.Tifrunner.gnm1.ann1.RXE2YS Arachis hypogaea HOM05D008592 ORTHO05D010654 3.8e-10 68.6 122 36.9
arahy.Tifrunner.gnm1.ann1.EM9SG6 Arachis hypogaea HOM05D008592 ORTHO05D010654 9.4e-09 63.9 79 36.7
Phvul.009G171100 Phaseolus vulgaris HOM05D008592 ORTHO05D010654 1.6e-08 63.2 96 36.5
Lalb_Chr08g0236881 Lupinus albus HOM05D008592 ORTHO05D010654 4.7e-08 61.6 111 36.0
BolC6t38474H Brassica oleracea HOM05D008592 ORTHO05D010654 6.1e-08 61.2 50 56.0
Medtr3g075430 Medicago truncatula HOM05D008592 ORTHO05D010654 6.1e-08 61.2 112 33.9
Cpa.g.sc4.24 Carica papaya HOM05D008592 ORTHO05D010654 2.3e-07 59.3 121 31.4
VMungo1309G3022 Vigna mungo HOM05D013571 ORTHO05D010654 6.7e-07 57.8 97 36.1
arahy.Tifrunner.gnm1.ann1.382FX8 Arachis hypogaea HOM05D013571 ORTHO05D010654 8.8e-07 57.4 81 33.3
arahy.Tifrunner.gnm1.ann1.356BXD Arachis hypogaea HOM05D013571 ORTHO05D010654 4.4e-06 55.1 84 34.5
VMungo1127G1462 Vigna mungo HOM05D013571 ORTHO05D010654 5.7e-06 54.7 86 38.4
TPR.G24764 Trifolium pratense HOM05D008592 ORTHO05D010654 9.7e-06 53.9 119 30.3


User provided reference genes

Program Settings