Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G18290 Arabidopsis thaliana HOM05D007478 ORTHO05D001700 1.3e-94 349.7 177 100.0
AL1G30670 Arabidopsis lyrata HOM05D007478 ORTHO05D001700 1.5e-82 309.7 179 88.8
Thhalv10009618m.g Eutrema salsugineum HOM05D007478 ORTHO05D001700 1.5e-79 299.7 180 85.0
Sp1g16260 Schrenkiella parvula HOM05D007478 ORTHO05D001700 3.2e-77 292.0 179 82.7
BolC8t51893H Brassica oleracea HOM05D007478 ORTHO05D001700 9.2e-77 290.4 179 83.2
C08p43450 Brassica napus HOM05D007478 ORTHO05D001700 1.2e-76 290.0 179 83.2
Carub.0001s1791 Capsella rubella HOM05D007478 ORTHO05D001700 1.2e-76 290.0 181 84.0
A09p60000 Brassica napus HOM05D007478 ORTHO05D001700 3.3e-74 282.0 184 79.3
BraA09t41370Z Brassica rapa HOM05D007478 ORTHO05D001700 3.3e-74 282.0 184 79.3
CARHR018850 Cardamine hirsuta HOM05D007478 ORTHO05D001700 9.5e-74 280.4 177 80.2
BcaB07g31840 Brassica carinata HOM05D007478 ORTHO05D001700 1.7e-70 269.6 182 77.5
BraA06t24560Z Brassica rapa HOM05D007478 ORTHO05D001700 3.2e-69 265.4 179 77.1
A06p14310 Brassica napus HOM05D007478 ORTHO05D001700 2.0e-68 262.7 179 76.5
C05p16570 Brassica napus HOM05D007478 ORTHO05D001700 3.6e-65 251.9 177 75.7
BcaC05g25723 Brassica carinata HOM05D007478 ORTHO05D001700 4.7e-65 251.5 178 75.3
BolC5t30355H Brassica oleracea HOM05D007478 ORTHO05D001700 4.7e-65 251.5 178 75.3
BcaB03g12972 Brassica carinata HOM05D007478 ORTHO05D001700 4.0e-64 248.4 179 76.0
A08p30470 Brassica napus HOM05D007478 ORTHO05D001700 9.2e-61 237.3 177 72.9
BraA08t34979Z Brassica rapa HOM05D007478 ORTHO05D001700 9.2e-61 237.3 177 72.9
BcaC07g38898 Brassica carinata HOM05D007478 ORTHO05D001700 1.6e-60 236.5 177 72.9
C08p18500 Brassica napus HOM05D007478 ORTHO05D001700 1.6e-60 236.5 177 72.9
BolC8t49482H Brassica oleracea HOM05D007478 ORTHO05D001700 1.6e-60 236.5 177 72.9
BcaNung05439 Brassica carinata HOM05D007478 ORTHO05D001700 4.3e-50 201.8 177 65.5
THA.LOC104812173 Tarenaya hassleriana HOM05D007478 ORTHO05D001700 6.4e-46 188.0 187 62.0
BcaC07g41336 Brassica carinata HOM05D007478 ORTHO05D001700 2.4e-32 142.9 82 89.0
PGR083G2359 Punica granatum HOM05D007478 ORTHO05D001700 2.7e-28 129.4 177 40.7
Thecc.03G058400 Theobroma cacao HOM05D007478 ORTHO05D001700 2.3e-27 126.3 180 41.1
Potri.012G045600 Populus trichocarpa HOM05D007478 ORTHO05D001700 7.4e-26 121.3 180 40.6
MD06G1228100 Malus domestica HOM05D007478 ORTHO05D001700 1.6e-25 120.2 184 41.8
FAN18G0488 Fragaria x ananassa HOM05D007478 ORTHO05D001700 2.8e-25 119.4 182 41.2
Eucgr.B00987 Eucalyptus grandis HOM05D007478 ORTHO05D001700 6.2e-25 118.2 176 37.5
FvH4_5g17470 Fragaria vesca HOM05D007478 ORTHO05D001700 6.2e-25 118.2 182 40.7
Eucgr.B00885 Eucalyptus grandis HOM05D007478 ORTHO05D001700 8.1e-25 117.9 176 37.5
Sc15g0005840 Simmondsia chinensis HOM05D007478 ORTHO05D001700 8.1e-25 117.9 181 38.7
COL.COLO4_05000 Corchorus olitorius HOM05D007478 ORTHO05D001700 1.8e-24 116.7 180 38.3
Lj4g0014270 Lotus japonicus HOM05D007478 ORTHO05D001700 1.8e-24 116.7 180 40.0
FAN08G3433 Fragaria x ananassa HOM05D007478 ORTHO05D001700 3.1e-24 115.9 182 40.7
Cpa.g.sc3.382 Carica papaya HOM05D007478 ORTHO05D001700 4.0e-24 115.5 184 39.1
CiPaw.15G144400 Carya illinoinensis HOM05D007478 ORTHO05D001700 4.0e-24 115.5 181 39.2
Duzib068G1147 Durio zibethinus HOM05D007478 ORTHO05D001700 5.3e-24 115.2 177 39.0
Aqoxy5G00397 Aquilegia oxysepala HOM05D007478 ORTHO05D001700 6.9e-24 114.8 180 38.9
FAN13G0345 Fragaria x ananassa HOM05D007478 ORTHO05D001700 6.9e-24 114.8 182 40.1
Gorai.008G290600 Gossypium raimondii HOM05D007478 ORTHO05D001700 1.2e-23 114.0 181 40.9
Potri.015G036800 Populus trichocarpa HOM05D007478 ORTHO05D001700 1.5e-23 113.6 180 38.9
ClCG06G014210 Citrullus lanatus HOM05D007478 ORTHO05D001700 2.6e-23 112.8 178 39.9
Gohir.A12G269800 Gossypium hirsutum HOM05D007478 ORTHO05D001700 3.4e-23 112.5 181 40.3
Ca_17182_v3 Cicer arietinum L. HOM05D007478 ORTHO05D001700 4.5e-23 112.1 180 37.2
VMungo0251G2682 Vigna mungo HOM05D007478 ORTHO05D001700 4.5e-23 112.1 180 39.4
QL10p030590 Quercus lobata HOM05D007478 ORTHO05D001700 5.8e-23 111.7 180 38.3
Prupe.5G234600 Prunus persica HOM05D007478 ORTHO05D001700 7.6e-23 111.3 182 40.1
Cc04_g06130 Coffea canephora HOM05D007478 ORTHO05D001700 1.0e-22 110.9 180 37.8
Gohir.D12G270300 Gossypium hirsutum HOM05D007478 ORTHO05D001700 1.0e-22 110.9 181 40.3
Glyma.08G055200 Glycine max HOM05D007478 ORTHO05D001700 1.3e-22 110.5 180 36.7
Phvul.002G330900 Phaseolus vulgaris HOM05D007478 ORTHO05D001700 1.3e-22 110.5 180 38.3
Sed0016646 Sechium edule HOM05D007478 ORTHO05D001700 1.7e-22 110.2 176 37.5
MELO3C017371.2 Cucumis melo HOM05D007478 ORTHO05D001700 2.2e-22 109.8 176 38.6
Sabra15G0031300 Salix brachista HOM05D007478 ORTHO05D001700 2.2e-22 109.8 180 37.8
Manes.14G171900 Manihot esculenta HOM05D007478 ORTHO05D001700 4.9e-22 108.6 182 40.7
RcHm_v2.0_Chr7g0178221 Rosa chinensis HOM05D007478 ORTHO05D001700 6.5e-22 108.2 182 39.0
Sed0024095 Sechium edule HOM05D007478 ORTHO05D001700 6.5e-22 108.2 184 37.0
Glyma.05G246800 Glycine max HOM05D007478 ORTHO05D001700 8.4e-22 107.8 180 35.6
Lalb_Chr09g0330341 Lupinus albus HOM05D007478 ORTHO05D001700 1.1e-21 107.5 176 38.1
Sabra12G0031700 Salix brachista HOM05D007478 ORTHO05D001700 1.1e-21 107.5 180 37.8
GSVIVG01008464001 Vitis vinifera HOM05D007478 ORTHO05D001700 1.1e-21 107.5 179 38.5
TAR629G0885 Trochodendron aralioides HOM05D007478 ORTHO05D001700 1.4e-21 107.1 184 37.5
Hma1.2p1_0163F.1_g073010 Hydrangea macrophylla HOM05D007478 ORTHO05D001700 1.9e-21 106.7 175 38.9
EL10As7g23792 Beta vulgaris HOM05D007478 ORTHO05D001700 4.2e-21 105.5 180 33.9
MD14G1237300 Malus domestica HOM05D007478 ORTHO05D001700 4.2e-21 105.5 185 40.5
TPR.G1399 Trifolium pratense HOM05D007478 ORTHO05D001700 5.5e-21 105.1 180 36.7
Lalb_Chr16g0386951 Lupinus albus HOM05D007478 ORTHO05D001700 7.1e-21 104.8 178 38.8
TWI81G0631 Tripterygium wilfordii HOM05D007478 ORTHO05D001700 1.6e-20 103.6 185 35.7
Psat4g000040 Pisum sativum HOM05D007478 ORTHO05D001700 2.7e-20 102.8 180 37.2
Medtr8g107420 Medicago truncatula HOM05D007478 ORTHO05D001700 4.6e-20 102.1 180 36.7
Lalb_Chr05g0221601 Lupinus albus HOM05D007478 ORTHO05D001700 6.0e-20 101.7 178 35.4
FAN04G1368 Fragaria x ananassa HOM05D007478 ORTHO05D001700 1.0e-19 100.9 132 45.5
BcaC07g41335 Brassica carinata HOM05D007478 ORTHO05D001700 1.1e-18 97.4 61 75.4
Oeu046159.1 Olea europaea HOM05D007478 ORTHO05D001700 1.1e-18 97.4 181 34.8
CsaV3_1G004460 Cucumis sativus L. HOM05D007478 ORTHO05D001700 5.7e-18 95.1 162 37.0
Rhsim12G0138100 Rhododendron simsii HOM05D007478 ORTHO05D001700 1.6e-17 93.6 196 35.2
Dinv08199 Davidia involucrata HOM05D007478 ORTHO05D001700 4.5e-15 85.5 177 33.3
MSTRG.9308 Avicennia marina HOM05D007478 ORTHO05D001700 5.8e-15 85.1 178 33.7
MSTRG.4582 Avicennia marina HOM05D007478 ORTHO05D001700 1.3e-14 84.0 178 32.6
Haze_18881 Corylus avellana HOM05D007478 ORTHO05D001700 1.7e-14 83.6 132 39.4
Duzib205G1935 Durio zibethinus HOM05D007478 ORTHO05D001700 1.7e-14 83.6 114 41.2
Migut.D01319 Erythranthe guttata HOM05D007478 ORTHO05D001700 2.2e-14 83.2 178 33.7
Oeu026265.1 Olea europaea HOM05D007478 ORTHO05D001700 3.8e-14 82.4 181 33.7
SalBow1G4808 Salvia bowleyana HOM05D007478 ORTHO05D001700 6.5e-14 81.6 182 35.7
AUR62042856 Chenopodium quinoa HOM05D007478 ORTHO05D001700 8.4e-14 81.3 176 34.1
MBI16_g21180_MAGBIO Magnolia biondii HOM05D007478 ORTHO05D001700 1.4e-13 80.5 130 39.2
HPP92_004882 Vanilla planifolia HOM05D007478 ORTHO05D001700 5.5e-13 78.6 186 34.4
ATR0326G051 Amborella trichopoda HOM05D001935 ORTHO05D001700 1.6e-12 77.0 182 33.5
Os01g0121000 Oryza sativa ssp. japonica HOM05D007478 ORTHO05D001700 1.6e-12 77.0 149 36.9
Zm00001eb126350 Zea mays HOM05D007478 ORTHO05D001700 3.5e-12 75.9 206 31.1
SGA_v2.0_scaffold172G39020 Striga asiatica HOM05D007478 ORTHO05D001700 7.9e-12 74.7 184 32.6
Zm00001eb125870 Zea mays HOM05D007478 ORTHO05D001700 1.3e-11 73.9 105 40.0
CANSAT80G2839 Cannabis sativa HOM05D007478 ORTHO05D001700 2.3e-11 73.2 210 29.5
HPP92_004837 Vanilla planifolia HOM05D007478 ORTHO05D001700 3.3e-10 69.3 190 31.1
HPP92_004839 Vanilla planifolia HOM05D007478 ORTHO05D001700 3.3e-10 69.3 190 31.1
Manes.06G004900 Manihot esculenta HOM05D007478 ORTHO05D001700 1.3e-09 67.4 137 34.3
Zm00001eb334830 Zea mays HOM05D007478 ORTHO05D001700 1.4e-08 63.9 211 28.0
QL04p087054 Quercus lobata HOM05D001935 ORTHO05D001700 9.0e-08 61.2 86 39.5
Migut.I00269 Erythranthe guttata HOM05D007478 ORTHO05D001700 5.0e-06 55.5 149 30.2
C07p25270 Brassica napus HOM05D001022 ORTHO05D000825 8.5e-06 54.7 100 35.0


User provided reference genes

Program Settings