Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G16945 Arabidopsis thaliana HOM05D000051 ORTHO05D026859 1.3e-31 139.0 66 100.0
AL1G29120 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.8e-25 116.7 59 91.5
AT1G16930 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.8e-22 108.6 59 83.1
Sp1g15070 Schrenkiella parvula HOM05D000051 ORTHO05D000015 8.6e-20 99.8 58 75.9
A04p16760 Brassica napus HOM05D000051 ORTHO05D000015 8.0e-18 93.2 58 70.7
BraA04t17308Z Brassica rapa HOM05D000051 ORTHO05D000015 8.0e-18 93.2 58 70.7
Carub.0001s1667 Capsella rubella HOM05D000051 ORTHO05D000015 8.9e-17 89.7 59 67.8
Thhalv10000884m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.7e-15 85.5 57 64.9
CARHR017440 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.2e-15 85.1 61 60.7
Thhalv10000123m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.1e-14 80.9 65 60.0
Aa31LG7G1370 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.2e-13 79.3 62 58.1
Aa31LG5G24210 Aethionema arabicum HOM05D000051 ORTHO05D000015 7.8e-13 76.6 59 59.3
Aa31LG7G1360 Aethionema arabicum HOM05D000051 ORTHO05D000015 7.8e-13 76.6 59 59.3
A05p30910 Brassica napus HOM05D000051 ORTHO05D026859 1.3e-12 75.9 59 57.6
BraA05t21933Z Brassica rapa HOM05D000051 ORTHO05D026859 6.6e-12 73.6 59 57.6
Aa31sc2022G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.5e-11 72.4 59 55.9
AT1G80470 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.6e-10 68.9 53 56.6
BcaC05g25550 Brassica carinata HOM05D000051 ORTHO05D000015 1.6e-10 68.9 59 52.5
Aa31LG7G1950 Aethionema arabicum HOM05D000051 ORTHO05D000015 4.7e-10 67.4 59 50.8
A06p12850 Brassica napus HOM05D000051 ORTHO05D000015 4.7e-10 67.4 56 58.9
BraA06t24445Z Brassica rapa HOM05D000051 ORTHO05D000015 4.7e-10 67.4 56 58.9
C05p15250 Brassica napus HOM05D000051 ORTHO05D000015 6.1e-10 67.0 59 52.5
BolC5t30229H Brassica oleracea HOM05D000051 ORTHO05D000015 6.1e-10 67.0 56 57.1
A06p12840 Brassica napus HOM05D000051 ORTHO05D000015 8.0e-10 66.6 59 50.8
C05p15180 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-09 65.9 48 62.5
AL2G41010 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.5e-08 62.4 52 57.7
BcaB02g06662 Brassica carinata HOM05D000051 ORTHO05D000015 2.6e-08 61.6 59 49.2
A06p12820 Brassica napus HOM05D000051 ORTHO05D000015 2.2e-07 58.5 48 54.2
AT1G60410 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.7e-07 57.8 56 46.4
BcaC07g40938 Brassica carinata HOM05D000051 ORTHO05D000015 4.9e-07 57.4 52 53.8
C08p39320 Brassica napus HOM05D000051 ORTHO05D000015 4.9e-07 57.4 52 53.8
BolC8t51504H Brassica oleracea HOM05D000051 ORTHO05D000015 4.9e-07 57.4 52 53.8
A09p56340 Brassica napus HOM05D001862 ORTHO05D000015 1.1e-06 56.2 52 53.8
BraA09t41029Z Brassica rapa HOM05D001862 ORTHO05D002133 1.1e-06 56.2 52 53.8
AT5G22720 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.4e-06 55.8 46 56.5
BolC5t30232H Brassica oleracea HOM05D000051 ORTHO05D026859 3.2e-06 54.7 36 66.7
AL2G16290 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.1e-06 54.3 56 46.4
C05p15230 Brassica napus HOM05D000051 ORTHO05D000015 4.1e-06 54.3 48 56.2
CARHR073990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.4e-06 53.9 49 55.1
BcaC05g25548 Brassica carinata HOM05D000051 ORTHO05D000015 7.0e-06 53.5 59 47.5


User provided reference genes

Program Settings