Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 5.8e-297 1023.5 522 100.0
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 1.5e-276 955.7 522 93.5
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 3.3e-268 927.9 522 90.2
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 8.5e-264 913.3 522 88.9
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 1.0e-253 879.8 522 86.4
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 1.2e-252 876.3 521 85.8
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 7.5e-252 873.6 529 85.4
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 6.5e-248 860.5 522 84.3
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 1.1e-242 843.2 542 81.4
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 7.3e-239 830.5 525 81.1
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 2.2e-219 765.8 537 74.7
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 3.4e-180 635.6 558 59.3
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 4.5e-180 635.2 557 59.4
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.0e-179 634.0 558 59.5
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 2.5e-178 629.4 539 60.9
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 7.1e-178 627.9 527 61.1
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 2.7e-177 625.9 556 59.4
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 2.8e-174 615.9 534 60.1
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 2.4e-173 612.8 560 57.5
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 2.4e-173 612.8 563 57.0
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 6.9e-173 611.3 560 57.7
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 2.6e-172 609.4 539 59.0
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 1.1e-170 604.0 565 55.9
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 2.5e-170 602.8 581 55.1
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 3.2e-170 602.4 556 56.8
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 4.6e-169 598.6 552 56.7
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 7.9e-169 597.8 567 56.3
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 1.4e-168 597.0 550 55.1
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 5.1e-168 595.1 550 56.5
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 1.5e-167 593.6 559 56.5
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 1.3e-166 590.5 554 54.5
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 2.2e-166 589.7 592 54.2
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 8.2e-166 587.8 532 58.1
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 4.1e-165 585.5 572 55.6
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 4.1e-165 585.5 566 55.5
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 4.5e-164 582.0 556 55.6
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 7.7e-164 581.3 539 57.0
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 3.8e-163 578.9 535 56.8
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 5.0e-163 578.6 553 56.2
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 6.5e-163 578.2 523 56.2
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 8.5e-163 577.8 564 54.3
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 9.4e-162 574.3 559 54.6
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 1.2e-161 573.9 554 54.7
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 2.1e-161 573.2 573 55.1
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 4.7e-161 572.0 542 54.6
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 3.9e-160 568.9 539 54.9
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 2.6e-159 566.2 535 56.1
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 2.2e-158 563.1 541 54.7
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 2.2e-158 563.1 604 50.8
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 4.8e-158 562.0 549 53.6
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 9.1e-157 557.8 542 53.1
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 2.6e-156 556.2 535 55.3
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 1.0e-155 554.3 325 86.8
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 1.3e-155 553.9 576 52.8
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 3.8e-155 552.4 615 49.9
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 6.1e-153 545.0 592 50.3
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 3.9e-152 542.3 627 48.5
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 1.5e-151 540.4 592 50.2
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 4.8e-150 535.4 553 51.5
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.1e-149 534.3 498 57.0
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 2.6e-148 529.6 575 51.3
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 1.0e-147 527.7 572 50.3
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 4.2e-146 522.3 506 56.7
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 9.4e-146 521.2 546 52.0
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.6e-140 503.8 501 54.3
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 1.9e-138 496.9 516 53.7
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 3.2e-138 496.1 489 53.8
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 2.7e-137 493.0 514 52.9
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 4.0e-136 489.2 522 51.1
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 2.2e-134 483.4 560 47.5
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 1.4e-133 480.7 555 49.4
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 1.6e-132 477.2 522 49.8
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 1.6e-132 477.2 400 61.2
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 1.2e-119 434.5 494 49.2
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 2.0e-119 433.7 554 45.5
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 9.8e-119 431.4 369 60.4
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 8.0e-113 411.8 499 46.3
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 2.7e-108 396.7 553 41.2
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.7e-107 394.0 434 49.5
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 6.2e-105 385.6 349 56.4
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 9.9e-103 378.3 588 36.9
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 8.6e-99 365.2 511 40.7
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 3.1e-96 356.7 275 65.5
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 1.1e-90 338.2 397 48.1
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 1.9e-90 337.4 277 63.2
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 2.6e-87 327.0 365 50.7
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 2.3e-83 313.9 413 44.6
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 1.2e-79 301.6 282 55.3
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 5.8e-71 272.7 413 41.9
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 1.3e-70 271.6 287 53.0
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 8.4e-70 268.9 171 83.0
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.1e-65 254.2 197 62.9
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 3.7e-57 226.9 246 50.4
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 5.7e-50 203.0 239 48.1
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.3e-46 191.8 211 48.3
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 1.8e-43 181.4 189 55.0
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.2e-38 164.5 189 48.1
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.2e-38 164.5 189 48.1
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 5.5e-37 159.8 196 46.4
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 9.4e-37 159.1 123 59.3
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 2.3e-35 154.5 96 70.8
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 5.2e-35 153.3 115 59.1
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 4.8e-33 146.7 165 47.9
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 8.3e-25 119.4 135 50.4
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 3.1e-24 117.5 95 58.9
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 3.0e-11 74.3 88 47.7
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 1.7e-06 58.5 131 35.9


User provided reference genes

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