Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 3.5e-80 301.6 156 100.0
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 4.4e-67 258.1 156 84.0
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 2.7e-64 248.8 156 84.0
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 4.3e-54 214.9 169 74.6
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 3.7e-53 211.8 168 70.2
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.8e-52 209.5 165 72.1
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 1.1e-49 200.3 165 68.5
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 7.1e-49 197.6 168 68.5
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 7.1e-49 197.6 168 68.5
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 2.1e-48 196.1 170 68.8
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 1.1e-46 190.3 168 66.1
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 2.1e-45 186.0 166 65.1
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 3.4e-43 178.7 166 63.9
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 6.0e-40 167.9 158 65.2
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 4.8e-37 158.3 175 53.7
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 6.3e-29 131.3 142 54.9
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 2.6e-27 125.9 175 45.1
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 4.2e-25 118.6 180 46.1
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 5.5e-25 118.2 187 44.9
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 2.1e-24 116.3 187 44.4
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 2.7e-24 115.9 177 42.9
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 2.7e-24 115.9 173 45.7
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 6.1e-24 114.8 187 43.3
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 1.4e-23 113.6 183 43.7
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 6.7e-23 111.3 183 44.8
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 2.0e-22 109.8 186 44.1
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 4.4e-22 108.6 186 44.1
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 7.4e-22 107.8 183 46.4
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.3e-21 107.1 161 46.6
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 1.3e-21 107.1 181 46.4
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 2.8e-21 105.9 168 43.5
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 2.8e-21 105.9 186 41.4
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 3.7e-21 105.5 177 45.2
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 4.8e-21 105.1 174 44.8
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 6.3e-21 104.8 182 42.3
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 6.3e-21 104.8 175 45.1
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 6.3e-21 104.8 181 43.1
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 8.2e-21 104.4 179 45.3
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 8.2e-21 104.4 177 43.5
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 1.1e-20 104.0 181 43.6
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 5.3e-20 101.7 167 44.9
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 5.3e-20 101.7 179 41.3
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 5.3e-20 101.7 165 44.8
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.2e-19 100.5 171 45.0
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.5e-19 100.1 163 46.6
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 1.5e-19 100.1 175 44.0
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.6e-19 99.4 165 44.2
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 2.6e-19 99.4 156 47.4
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 4.5e-19 98.6 172 40.1
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 5.9e-19 98.2 170 44.7
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 5.9e-19 98.2 120 51.7
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 7.7e-19 97.8 159 47.8
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 7.7e-19 97.8 174 44.3
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 7.7e-19 97.8 176 40.3
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 2.2e-18 96.3 170 44.7
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 2.2e-18 96.3 173 44.5
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 3.8e-18 95.5 174 40.2
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 6.5e-18 94.7 172 41.9
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.4e-17 93.6 176 41.5
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 1.4e-17 93.6 120 50.8
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 2.5e-17 92.8 181 42.5
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 5.5e-17 91.7 164 42.1
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 5.5e-17 91.7 176 42.6
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 1.2e-16 90.5 155 43.2
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 1.6e-16 90.1 157 43.3
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 2.1e-16 89.7 162 41.4
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.7e-16 89.4 127 45.7
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 3.6e-16 89.0 178 39.9
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 4.7e-16 88.6 182 40.7
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 8.0e-16 87.8 173 41.0
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 1.0e-15 87.4 190 40.5
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 3.0e-15 85.9 141 43.3
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 6.7e-15 84.7 156 41.0
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 8.8e-15 84.3 169 38.5
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 8.8e-15 84.3 158 44.3
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 1.1e-14 84.0 153 41.8
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 2.0e-14 83.2 173 37.6
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.0e-14 83.2 123 47.2
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 2.0e-14 83.2 150 47.3
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 2.0e-14 83.2 154 42.9
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 2.0e-14 83.2 180 40.0
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 2.0e-14 83.2 167 40.1
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.6e-14 82.8 121 46.3
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 4.4e-14 82.0 156 39.7
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 4.4e-14 82.0 178 41.0
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 7.4e-14 81.3 128 43.0
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 7.4e-14 81.3 99 49.5
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 1.7e-13 80.1 177 37.9
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 1.7e-13 80.1 154 40.3
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 2.2e-13 79.7 162 38.3
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 2.2e-13 79.7 159 40.9
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 3.7e-13 79.0 145 42.8
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 3.7e-13 79.0 189 35.4
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 4.8e-13 78.6 116 50.9
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 1.8e-12 76.6 65 61.5
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 7.0e-12 74.7 128 41.4
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.6e-11 73.6 73 58.9
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 4.5e-11 72.0 141 41.1
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 7.7e-11 71.2 164 37.2
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 1.0e-10 70.9 174 35.1
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.0e-10 70.9 161 36.0
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 1.7e-10 70.1 144 37.5
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 6.5e-10 68.2 74 51.4
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 4.2e-09 65.5 123 42.3
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 9.4e-09 64.3 149 39.6
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 4.7e-08 62.0 64 57.8
PGR102G2442 Punica granatum HOM05D006672 ORTHO05D007769 4.7e-08 62.0 174 34.5
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 4.7e-08 62.0 175 33.1
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 4.0e-07 58.9 167 36.5
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 5.2e-07 58.5 105 40.0
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 1.2e-06 57.4 138 33.3
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 1.2e-06 57.4 54 57.4
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 2.0e-06 56.6 170 33.5
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 4.4e-06 55.5 181 33.1
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 5.7e-06 55.1 116 34.5


User provided reference genes

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