Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G11470 Arabidopsis thaliana HOM05D009074 ORTHO05D011606 1.2e-77 293.1 151 100.0
AL1G22570 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 7.7e-32 141.0 167 49.1
AL1G22560 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 5.3e-25 118.2 162 44.4
BcaC08g43626 Brassica carinata HOM05D009074 ORTHO05D011606 2.1e-13 79.7 81 45.7
C06p10420 Brassica napus HOM05D009074 ORTHO05D011606 2.1e-13 79.7 81 45.7
BolC6t36119H Brassica oleracea HOM05D009074 ORTHO05D011606 2.1e-13 79.7 81 45.7
AL1G43120 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 2.7e-13 79.3 92 40.2
AL1G43110 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 4.0e-12 75.5 92 39.1
Aa31LG9G11490 Aethionema arabicum HOM05D009074 ORTHO05D011606 8.8e-12 74.3 67 50.7
Aa31LG9G11450 Aethionema arabicum HOM05D009074 ORTHO05D011606 1.5e-11 73.6 67 50.7
BcaB08g37341 Brassica carinata HOM05D009074 ORTHO05D011606 1.8e-09 66.6 68 44.1
C08p49050 Brassica napus HOM05D009074 ORTHO05D011606 1.8e-09 66.6 68 44.1
A09p65110 Brassica napus HOM05D009074 ORTHO05D011606 2.4e-09 66.2 65 44.6
BraA09t41854Z Brassica rapa HOM05D009074 ORTHO05D011606 2.4e-09 66.2 65 44.6
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 3.1e-09 65.9 84 34.5
AL1G24720 Arabidopsis lyrata HOM05D009074 ORTHO05D023607 3.1e-09 65.9 84 34.5
BcaC06g35452 Brassica carinata HOM05D009074 ORTHO05D011606 3.1e-09 65.9 74 40.5
BolC7t42086H Brassica oleracea HOM05D009074 ORTHO05D011606 3.1e-09 65.9 90 37.8
AL1G21130 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 1.2e-08 63.9 78 37.2
BcaC07g41830 Brassica carinata HOM05D009074 ORTHO05D011606 1.6e-08 63.5 63 44.4
BraA07t28839Z Brassica rapa HOM05D009074 ORTHO05D011606 2.7e-08 62.8 70 41.4
BcaC05g28233 Brassica carinata HOM05D009074 ORTHO05D032380 3.5e-08 62.4 78 32.1
C05p42860 Brassica napus HOM05D001049 ORTHO05D005951 3.5e-08 62.4 78 32.1
BolC5t33016H Brassica oleracea HOM05D009074 ORTHO05D032380 3.5e-08 62.4 78 32.1
AL1G24010 Arabidopsis lyrata HOM05D009074 ORTHO05D023607 1.7e-07 60.1 81 34.6
AL1G24050 Arabidopsis lyrata HOM05D009074 ORTHO05D023607 1.7e-07 60.1 81 34.6
C07p15930 Brassica napus HOM05D009074 ORTHO05D011606 5.0e-07 58.5 70 40.0
BcaC05g28234 Brassica carinata HOM05D009074 ORTHO05D032380 3.2e-06 55.8 68 38.2


User provided reference genes

Program Settings