Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G11112 Arabidopsis thaliana HOM05D011034 ORTHO05D013144 9.9e-39 162.9 79 100.0
AL1G22100 Arabidopsis lyrata HOM05D011034 ORTHO05D013144 5.1e-35 150.6 80 92.5
Carub.0001s1068 Capsella rubella HOM05D011034 ORTHO05D013144 6.8e-32 140.2 79 88.6
CARHR011310 Cardamine hirsuta HOM05D011034 ORTHO05D013144 3.2e-29 131.3 79 87.3
Sp1g09790 Schrenkiella parvula HOM05D011034 ORTHO05D013144 5.4e-29 130.6 80 86.2
Thhalv10009626m.g Eutrema salsugineum HOM05D011034 ORTHO05D013144 6.6e-27 123.6 80 83.8
C05p09390 Brassica napus HOM05D011034 ORTHO05D013144 4.4e-23 110.9 80 78.8
BolC5t29680H Brassica oleracea HOM05D011034 ORTHO05D013144 4.4e-23 110.9 80 78.8
A06p07810 Brassica napus HOM05D011034 ORTHO05D013144 5.8e-23 110.5 81 79.0
BraA06t23981Z Brassica rapa HOM05D011034 ORTHO05D013144 5.8e-23 110.5 81 79.0
BcaB03g13276 Brassica carinata HOM05D011034 ORTHO05D013144 6.4e-22 107.1 67 85.1
C08p14120 Brassica napus HOM05D011034 ORTHO05D013144 3.3e-18 94.7 67 82.1
BolC8t49049H Brassica oleracea HOM05D011034 ORTHO05D013144 5.6e-18 94.0 66 78.8
A08p33660 Brassica napus HOM05D011034 ORTHO05D013144 7.3e-18 93.6 66 77.3
BraA08t35281Z Brassica rapa HOM05D011034 ORTHO05D013144 2.1e-17 92.0 66 75.8
BcaC07g38638 Brassica carinata HOM05D011034 ORTHO05D013144 6.2e-17 90.5 66 75.8
Aa31LG2G9440 Aethionema arabicum HOM05D011034 ORTHO05D013144 1.2e-15 86.3 84 57.1
THA.LOC104819117 Tarenaya hassleriana HOM05D011034 ORTHO05D013144 6.0e-12 73.9 85 55.3
Glyma.15G069900 Glycine max HOM05D007185 ORTHO05D009016 2.4e-08 62.0 88 46.6
Glyma.13G243800 Glycine max HOM05D007185 ORTHO05D009016 9.0e-08 60.1 88 44.3
Phvul.006G189400 Phaseolus vulgaris HOM05D007185 ORTHO05D009016 5.8e-07 57.4 90 44.4
COL.COLO4_31534 Corchorus olitorius HOM05D007185 ORTHO05D009016 9.9e-07 56.6 90 45.6
Lj6g0018466 Lotus japonicus HOM05D007185 ORTHO05D009016 1.7e-06 55.8 94 42.6
Lalb_Chr15g0089951 Lupinus albus HOM05D007185 ORTHO05D009016 8.4e-06 53.5 74 50.0
Thecc.06G194500 Theobroma cacao HOM05D007185 ORTHO05D009016 8.4e-06 53.5 88 44.3


User provided reference genes

Program Settings