Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G10747 Arabidopsis thaliana HOM05D009875 ORTHO05D010512 2.3e-46 188.3 84 100.0
CARHR010960 Cardamine hirsuta HOM05D009875 ORTHO05D010512 2.9e-28 128.3 77 74.0
Carub.0001s1029 Capsella rubella HOM05D009875 ORTHO05D010512 2.4e-27 125.2 78 70.5
CARHR010940 Cardamine hirsuta HOM05D009875 ORTHO05D010512 5.4e-27 124.0 77 70.1
AT1G10717 Arabidopsis thaliana HOM05D011357 ORTHO05D010512 1.3e-17 92.8 90 50.0
Carub.0004s2371 Capsella rubella HOM05D009875 ORTHO05D010512 2.3e-17 92.0 75 54.7
AL1G21602 Arabidopsis lyrata HOM05D011357 ORTHO05D010512 5.1e-17 90.9 86 52.3
Carub.0006s2682 Capsella rubella HOM05D009875 ORTHO05D010512 1.5e-16 89.4 81 56.8
AL4G39490 Arabidopsis lyrata HOM05D009875 ORTHO05D010512 2.5e-16 88.6 75 56.0
C04p18090 Brassica napus HOM05D011357 ORTHO05D010512 2.8e-15 85.1 76 47.4
BolC4t23361H Brassica oleracea HOM05D011357 ORTHO05D010512 2.8e-15 85.1 76 47.4
A05p13790 Brassica napus HOM05D011357 ORTHO05D010512 3.6e-15 84.7 76 46.1
BraA05t20316Z Brassica rapa HOM05D011357 ORTHO05D010512 3.6e-15 84.7 76 46.1
AT2G41415 Arabidopsis thaliana HOM05D009875 ORTHO05D010512 2.4e-14 82.0 75 50.7
Thhalv10009817m.g Eutrema salsugineum HOM05D013447 ORTHO05D010512 2.2e-12 75.5 78 42.3
AL1G38340 Arabidopsis lyrata HOM05D011357 ORTHO05D010512 4.9e-12 74.3 72 45.8
BcaC01g02926 Brassica carinata HOM05D009875 ORTHO05D010512 6.4e-12 73.9 72 43.1
C03p58320 Brassica napus HOM05D009875 ORTHO05D010512 6.4e-12 73.9 72 43.1
CARHR136530 Cardamine hirsuta HOM05D009875 ORTHO05D010512 6.4e-12 73.9 76 46.1
Carub.0001s1023 Capsella rubella HOM05D011357 ORTHO05D010512 1.1e-11 73.2 75 44.0
CARHR010900 Cardamine hirsuta HOM05D011357 ORTHO05D010512 1.1e-11 73.2 57 54.4
AL1G21670 Arabidopsis lyrata HOM05D011357 ORTHO05D010512 1.4e-11 72.8 50 80.0
AT1G27135 Arabidopsis thaliana HOM05D011357 ORTHO05D010512 1.9e-11 72.4 68 47.1
AT1G10715 Arabidopsis thaliana HOM05D011357 ORTHO05D010512 2.4e-11 72.0 70 47.1
Aa31LG1G4090 Aethionema arabicum HOM05D009875 ORTHO05D010512 4.1e-11 71.2 81 42.0
Thhalv10009981m.g Eutrema salsugineum HOM05D020486 ORTHO05D024755 9.2e-11 70.1 79 48.1
BcaB08g34725 Brassica carinata HOM05D009875 ORTHO05D010512 1.2e-10 69.7 72 41.7
BolC2t08520H Brassica oleracea HOM05D013447 ORTHO05D010512 3.5e-10 68.2 75 42.7
AL3G47520 Arabidopsis lyrata HOM05D011357 ORTHO05D010512 4.6e-10 67.8 85 40.0
A06p34030 Brassica napus HOM05D009875 ORTHO05D010512 4.6e-10 67.8 70 42.9
BraA06t26337Z Brassica rapa HOM05D009875 ORTHO05D010512 4.6e-10 67.8 70 42.9
A09p40980 Brassica napus HOM05D009875 ORTHO05D010512 1.7e-09 65.9 70 40.0
CARHR048590 Cardamine hirsuta HOM05D020486 ORTHO05D024755 2.3e-09 65.5 79 49.4
THA.LOC109116590 Tarenaya hassleriana HOM05D024853 ORTHO05D023673 2.3e-09 65.5 80 38.8
AT1G10745 Arabidopsis thaliana HOM05D013447 ORTHO05D010512 3.0e-09 65.1 79 45.6
A02p14730 Brassica napus HOM05D013447 ORTHO05D010512 3.9e-09 64.7 75 41.3
BraA02t06540Z Brassica rapa HOM05D013447 ORTHO05D010512 3.9e-09 64.7 75 41.3
BraA09t39592Z Brassica rapa HOM05D009875 ORTHO05D010512 6.6e-09 63.9 70 40.0
Thhalv10009267m.g Eutrema salsugineum HOM05D009875 ORTHO05D010512 6.6e-09 63.9 76 53.9
C05p23010 Brassica napus HOM05D009875 ORTHO05D010512 8.7e-09 63.5 70 38.6
BolC5t31000H Brassica oleracea HOM05D009875 ORTHO05D010512 8.7e-09 63.5 74 37.8
Carub.0003s2944 Capsella rubella HOM05D011357 ORTHO05D010512 8.7e-09 63.5 72 45.8
AL8G24450 Arabidopsis lyrata HOM05D024853 ORTHO05D023673 1.9e-08 62.4 82 37.8
C05p23020 Brassica napus HOM05D009875 ORTHO05D010512 3.3e-08 61.6 69 37.7
AT2G16225 Arabidopsis thaliana HOM05D011357 ORTHO05D010512 4.3e-08 61.2 77 48.1
Carub.0002s0434 Capsella rubella HOM05D020486 ORTHO05D024755 9.6e-08 60.1 84 40.5
A04p22870 Brassica napus HOM05D025333 ORTHO05D010512 2.1e-07 58.9 73 41.1
C04p46650 Brassica napus HOM05D005581 ORTHO05D006792 2.1e-07 58.9 87 37.9
BolC4t26253H Brassica oleracea HOM05D005581 ORTHO05D006792 2.1e-07 58.9 87 37.9
BraA09t39591Z Brassica rapa HOM05D009875 ORTHO05D010512 3.6e-07 58.2 76 36.8
Carub.0001s1021 Capsella rubella HOM05D020486 ORTHO05D024755 1.1e-06 56.6 82 37.8
AT5G50345 Arabidopsis thaliana HOM05D024853 ORTHO05D023673 1.8e-06 55.8 82 35.4
Carub.0008s1042 Capsella rubella HOM05D024853 ORTHO05D023673 1.8e-06 55.8 80 32.5
Thhalv10015974m.g Eutrema salsugineum HOM05D011357 ORTHO05D010512 1.8e-06 55.8 73 39.7
BraA04t16955Z Brassica rapa HOM05D005581 ORTHO05D006792 3.1e-06 55.1 94 37.2
Thhalv10005199m.g Eutrema salsugineum HOM05D037493 ORTHO05D033804 3.1e-06 55.1 76 34.2
A04p12950 Brassica napus HOM05D005581 ORTHO05D006792 9.0e-06 53.5 94 36.2


User provided reference genes

Program Settings