Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G10745 Arabidopsis thaliana HOM05D013447 ORTHO05D010512 1.4e-43 179.1 83 100.0
Thhalv10009817m.g Eutrema salsugineum HOM05D013447 ORTHO05D010512 9.4e-24 113.2 80 57.5
Carub.0001s1027 Capsella rubella HOM05D009875 ORTHO05D010512 4.7e-23 110.9 83 61.4
Carub.0001s1028 Capsella rubella HOM05D013447 ORTHO05D010512 1.8e-22 109.0 87 64.4
A02p14720 Brassica napus HOM05D013447 ORTHO05D010512 1.1e-19 99.8 83 55.4
BraA02t06539Z Brassica rapa HOM05D013447 ORTHO05D010512 1.1e-19 99.8 83 55.4
BolC2t08518H Brassica oleracea HOM05D013447 ORTHO05D010512 2.0e-18 95.5 83 51.8
Aa31LG1G4090 Aethionema arabicum HOM05D009875 ORTHO05D010512 1.1e-16 89.7 80 51.2
CARHR010950 Cardamine hirsuta HOM05D013447 ORTHO05D010512 6.8e-14 80.5 62 53.2
A02p14730 Brassica napus HOM05D013447 ORTHO05D010512 3.4e-13 78.2 78 46.2
BraA02t06540Z Brassica rapa HOM05D013447 ORTHO05D010512 3.4e-13 78.2 78 46.2
BolC2t08520H Brassica oleracea HOM05D013447 ORTHO05D010512 5.7e-13 77.4 78 46.2
BraA07t27993Z Brassica rapa HOM05D016844 ORTHO05D028216 1.7e-12 75.9 82 48.8
BolC3t18093H Brassica oleracea HOM05D009875 ORTHO05D010512 1.1e-11 73.2 79 48.1
C05p23010 Brassica napus HOM05D009875 ORTHO05D010512 2.4e-11 72.0 79 48.1
A09p40980 Brassica napus HOM05D009875 ORTHO05D010512 4.1e-11 71.2 78 50.0
BcaC01g02926 Brassica carinata HOM05D009875 ORTHO05D010512 9.1e-11 70.1 82 45.1
C03p58320 Brassica napus HOM05D009875 ORTHO05D010512 9.1e-11 70.1 82 45.1
C03p35780 Brassica napus HOM05D016844 ORTHO05D028216 1.2e-10 69.7 86 44.2
BolC5t31000H Brassica oleracea HOM05D009875 ORTHO05D010512 1.6e-10 69.3 82 47.6
BraA09t39591Z Brassica rapa HOM05D009875 ORTHO05D010512 1.6e-10 69.3 82 45.1
C03p35790 Brassica napus HOM05D016844 ORTHO05D010512 2.0e-10 68.9 79 41.8
A06p34030 Brassica napus HOM05D009875 ORTHO05D010512 3.5e-10 68.2 79 45.6
C05p23020 Brassica napus HOM05D009875 ORTHO05D010512 3.5e-10 68.2 74 47.3
BraA06t26337Z Brassica rapa HOM05D009875 ORTHO05D010512 3.5e-10 68.2 79 45.6
BraA09t39592Z Brassica rapa HOM05D009875 ORTHO05D010512 4.5e-10 67.8 82 43.9
A03p29540 Brassica napus HOM05D016844 ORTHO05D010512 5.9e-10 67.4 79 40.5
AL1G38340 Arabidopsis lyrata HOM05D011357 ORTHO05D010512 1.0e-09 66.6 58 53.4
C02p23840 Brassica napus HOM05D013447 ORTHO05D010512 1.3e-09 66.2 60 48.3
BolC3t15886H Brassica oleracea HOM05D016844 ORTHO05D028216 1.3e-09 66.2 81 43.2
CARHR010940 Cardamine hirsuta HOM05D009875 ORTHO05D010512 2.9e-09 65.1 77 44.2
AT1G10747 Arabidopsis thaliana HOM05D009875 ORTHO05D010512 3.8e-09 64.7 79 45.6
AL1G21602 Arabidopsis lyrata HOM05D011357 ORTHO05D010512 5.0e-09 64.3 72 44.4
AT1G10717 Arabidopsis thaliana HOM05D011357 ORTHO05D010512 6.5e-09 63.9 89 41.6
BcaB08g34725 Brassica carinata HOM05D009875 ORTHO05D010512 6.5e-09 63.9 82 42.7
Carub.0001s1029 Capsella rubella HOM05D009875 ORTHO05D010512 9.4e-08 60.1 78 43.6
CARHR010960 Cardamine hirsuta HOM05D009875 ORTHO05D010512 1.2e-07 59.7 77 44.2
C02p23850 Brassica napus HOM05D013447 ORTHO05D010512 1.6e-07 59.3 78 41.0
C04p18090 Brassica napus HOM05D011357 ORTHO05D010512 1.8e-06 55.8 72 37.5
BolC4t23361H Brassica oleracea HOM05D011357 ORTHO05D010512 1.8e-06 55.8 72 37.5


User provided reference genes

Program Settings