Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 5.9e-161 570.9 295 100.0
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 8.5e-152 540.4 299 94.3
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 1.6e-142 509.6 300 89.7
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 3.9e-141 505.0 300 89.0
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 3.2e-135 485.3 289 87.2
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 3.2e-135 485.3 286 88.5
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 2.0e-129 466.1 299 82.3
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 2.9e-128 462.2 288 84.0
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 3.8e-128 461.8 287 84.3
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 7.2e-127 457.6 288 83.0
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 2.1e-126 456.1 287 84.7
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 4.7e-126 454.9 289 83.4
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 1.3e-120 436.8 278 82.7
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 2.6e-116 422.5 294 74.5
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 2.3e-112 409.5 265 78.5
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 1.1e-101 374.0 289 67.1
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 2.6e-100 369.4 288 67.7
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 7.5e-100 367.9 288 67.4
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 9.8e-100 367.5 289 68.2
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 4.9e-99 365.2 288 67.0
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 9.2e-98 360.9 289 67.1
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 1.2e-97 360.5 289 67.1
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 1.0e-96 357.5 287 66.9
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 1.3e-96 357.1 288 65.6
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 3.0e-96 355.9 289 64.7
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 3.9e-96 355.5 244 72.5
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 3.9e-96 355.5 289 64.7
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 8.6e-96 354.4 285 64.9
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 1.5e-95 353.6 283 62.5
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 4.3e-95 352.1 285 64.2
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 5.6e-95 351.7 285 63.9
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 7.3e-95 351.3 283 62.5
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 1.6e-94 350.1 286 63.6
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 1.6e-94 350.1 289 64.0
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 2.1e-94 349.7 286 64.7
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 2.8e-94 349.4 285 62.8
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 3.6e-94 349.0 285 64.9
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 4.7e-94 348.6 290 64.5
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 1.8e-93 346.7 243 73.3
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 3.1e-93 345.9 283 62.9
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 8.9e-93 344.4 290 65.2
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.2e-92 344.0 284 63.4
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 1.5e-92 343.6 287 64.1
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 1.5e-92 343.6 285 63.5
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 2.0e-92 343.2 287 63.4
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 9.9e-92 340.9 282 60.3
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 1.3e-91 340.5 286 62.2
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.3e-91 340.5 284 63.0
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 2.2e-91 339.7 288 62.5
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 2.9e-91 339.3 287 62.7
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 6.4e-91 338.2 288 62.8
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 8.3e-91 337.8 243 69.1
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 1.1e-90 337.4 286 61.2
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 1.4e-90 337.0 244 68.4
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 2.4e-90 336.3 270 65.6
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 3.2e-90 335.9 288 61.5
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 3.2e-90 335.9 259 66.8
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 5.4e-90 335.1 297 62.0
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 5.4e-90 335.1 285 64.2
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 1.2e-89 334.0 287 61.0
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 2.1e-89 333.2 259 64.5
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 3.5e-89 332.4 240 69.2
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 4.6e-89 332.0 284 60.9
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 1.3e-88 330.5 287 60.6
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 1.7e-88 330.1 267 65.2
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 5.1e-88 328.6 259 61.8
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 1.5e-87 327.0 301 61.1
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 1.9e-87 326.6 293 60.8
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.9e-87 326.6 264 64.8
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 9.5e-87 324.3 267 63.3
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 4.7e-86 322.0 243 69.1
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 1.8e-85 320.1 265 62.6
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 5.2e-85 318.5 236 66.1
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 5.8e-84 315.1 294 58.8
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 2.9e-83 312.8 264 63.3
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 3.8e-83 312.4 275 61.5
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 6.4e-83 311.6 224 68.3
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 1.4e-82 310.5 222 68.5
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 2.4e-82 309.7 255 63.1
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 5.4e-82 308.5 222 68.5
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 5.4e-82 308.5 287 58.9
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 7.1e-82 308.1 222 68.5
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 1.3e-80 303.9 250 64.0
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 1.3e-80 303.9 286 57.7
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 3.0e-80 302.8 218 68.3
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 3.9e-80 302.4 266 59.4
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 3.9e-80 302.4 253 62.1
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 3.3e-79 299.3 242 64.9
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 3.3e-79 299.3 271 60.9
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 4.7e-78 295.4 243 63.8
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 1.2e-76 290.8 256 58.2
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 1.5e-76 290.4 298 50.7
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 1.9e-74 283.5 312 52.9
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 9.3e-74 281.2 246 60.2
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 1.6e-73 280.4 283 54.4
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 4.6e-73 278.9 290 54.1
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 7.8e-73 278.1 240 67.1
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 5.1e-72 275.4 288 55.6
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 1.5e-68 263.8 273 53.5
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 1.1e-66 257.7 184 69.6
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 2.4e-66 256.5 195 66.7
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 5.4e-66 255.4 228 55.3
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 9.3e-66 254.6 231 52.8
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 2.7e-65 253.1 222 54.1
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 3.5e-65 252.7 222 55.4
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 4.8e-62 242.3 175 69.7
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 1.4e-61 240.7 175 65.7
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 6.9e-61 238.4 239 52.7
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 2.9e-59 233.0 294 45.2
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 1.9e-58 230.3 295 43.1
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 1.0e-56 224.6 289 46.4
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 3.4e-52 209.5 250 45.6
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 7.6e-52 208.4 268 47.4
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 1.3e-51 207.6 168 66.1
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 1.9e-50 203.8 247 46.6
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 5.1e-40 169.1 112 72.3
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 2.4e-37 160.2 230 43.0
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 4.1e-37 159.5 135 64.4
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 5.5e-34 149.1 223 37.7
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 8.8e-32 141.7 78 85.9
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 8.8e-32 141.7 78 84.6
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 2.6e-31 140.2 130 60.0
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 2.6e-31 140.2 112 62.5
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 7.4e-31 138.7 78 84.6
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 3.1e-29 133.3 79 84.8
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 1.2e-28 131.3 196 37.8
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 8.0e-25 118.6 80 77.5
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 9.7e-23 111.7 81 66.7
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 4.7e-17 92.8 52 90.4
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 4.7e-17 92.8 145 32.4
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 6.8e-16 89.0 198 30.3
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.4e-15 86.7 101 49.5
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.4e-15 86.7 101 49.5
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 4.4e-15 86.3 101 49.5
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.3e-14 84.7 101 48.5
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.7e-14 84.3 101 48.5
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 5.0e-11 72.8 56 62.5
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 2.5e-10 70.5 111 42.3
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 4.7e-09 66.2 54 61.1
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 1.8e-08 64.3 60 56.7
Phvul.005G084700 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 3.4e-07 60.1 127 35.4


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