Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G08035 Arabidopsis thaliana HOM05D009615 ORTHO05D011760 1.1e-59 233.0 112 100.0
AL1G18370 Arabidopsis lyrata HOM05D009615 ORTHO05D011760 1.5e-53 212.6 112 91.1
Sp1g06660 Schrenkiella parvula HOM05D009615 ORTHO05D011760 8.5e-44 180.3 108 79.6
Carub.0001s0738 Capsella rubella HOM05D009615 ORTHO05D011760 1.1e-43 179.9 109 80.7
CARHR007810 Cardamine hirsuta HOM05D009615 ORTHO05D011760 2.5e-43 178.7 99 90.9
Thhalv10009338m.g Eutrema salsugineum HOM05D009615 ORTHO05D011760 3.6e-42 174.9 106 80.2
BraA08t35442Z Brassica rapa HOM05D009615 ORTHO05D011760 8.2e-39 163.7 108 74.1
A08p35360 Brassica napus HOM05D009615 ORTHO05D011760 1.4e-38 162.9 108 74.1
C08p03480 Brassica napus HOM05D009615 ORTHO05D011760 1.4e-38 162.9 109 74.3
BolC8t47150H Brassica oleracea HOM05D009615 ORTHO05D011760 1.4e-38 162.9 109 74.3
BcaB03g13355 Brassica carinata HOM05D009615 ORTHO05D011760 2.4e-38 162.2 114 72.8
Thhalv10017369m.g Eutrema salsugineum HOM05D009615 ORTHO05D011760 1.2e-16 90.1 108 49.1
Sp4g11120 Schrenkiella parvula HOM05D009615 ORTHO05D011760 2.6e-16 89.0 112 44.6
BcaB02g06692 Brassica carinata HOM05D009615 ORTHO05D011760 7.5e-16 87.4 111 47.7
AT2G28330 Arabidopsis thaliana HOM05D009615 ORTHO05D011760 3.7e-15 85.1 112 43.8
AL4G21750 Arabidopsis lyrata HOM05D009615 ORTHO05D011760 3.5e-13 78.6 103 43.7
THA.LOC104806658 Tarenaya hassleriana HOM05D009615 ORTHO05D011760 1.0e-12 77.0 110 42.7
CARHR121260 Cardamine hirsuta HOM05D009615 ORTHO05D011760 4.0e-09 65.1 128 35.9
Carub.0004s0923 Capsella rubella HOM05D009615 ORTHO05D011760 5.2e-09 64.7 115 39.1
BolC4t23815H Brassica oleracea HOM05D009615 ORTHO05D011760 2.2e-07 59.3 120 38.3
A07p18870 Brassica napus HOM05D009615 ORTHO05D011760 2.8e-07 58.9 127 37.0
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 3.1e-06 55.5 91 41.8
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 4.1e-06 55.1 78 44.9
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 4.1e-06 55.1 78 44.9
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 4.1e-06 55.1 89 41.6
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 4.1e-06 55.1 89 41.6
BraA07t29594Z Brassica rapa HOM05D009615 ORTHO05D011760 7.0e-06 54.3 76 44.7
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 9.1e-06 53.9 77 44.2


User provided reference genes

Program Settings