Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 1.1e-62 243.4 145 100.0
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 7.5e-61 237.3 145 97.9
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 1.5e-53 213.0 145 89.0
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 4.4e-53 211.5 145 90.3
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 6.4e-52 207.6 146 89.0
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 1.7e-49 199.5 146 87.0
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 5.6e-48 194.5 145 86.2
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 8.1e-47 190.7 147 85.0
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 1.2e-45 186.8 142 81.0
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 1.1e-43 180.3 143 83.2
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 2.1e-39 166.0 145 77.2
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 8.1e-39 164.1 145 76.6
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 1.8e-38 162.9 143 69.9
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 1.1e-35 153.7 146 63.7
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 1.4e-30 136.7 106 78.3
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 1.8e-30 136.3 107 76.6
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 1.7e-28 129.8 106 76.4
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 9.6e-24 114.0 113 61.9
BolC8t52551H Brassica oleracea HOM05D001466 ORTHO05D001452 1.9e-19 99.8 103 58.3
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 5.5e-19 98.2 110 57.3
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 1.6e-18 96.7 111 55.0
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 1.6e-18 96.7 136 52.2
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 4.6e-18 95.1 109 56.9
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 6.0e-18 94.7 111 56.8
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 6.0e-18 94.7 137 48.9
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 7.9e-18 94.4 110 55.5
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 7.9e-18 94.4 122 53.3
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 7.9e-18 94.4 105 54.3
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 1.0e-17 94.0 109 55.0
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 1.3e-17 93.6 134 49.3
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 3.0e-17 92.4 125 52.8
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 3.0e-17 92.4 125 52.8
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 5.1e-17 91.7 113 52.2
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 5.1e-17 91.7 112 52.7
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 5.1e-17 91.7 112 52.7
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 6.7e-17 91.3 154 42.9
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 6.7e-17 91.3 124 52.4
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 8.7e-17 90.9 147 45.6
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 1.1e-16 90.5 102 56.9
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 1.5e-16 90.1 106 58.5
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 1.9e-16 89.7 103 57.3
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 2.5e-16 89.4 114 51.8
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 3.3e-16 89.0 107 54.2
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 4.3e-16 88.6 109 55.0
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 4.3e-16 88.6 107 54.2
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 4.3e-16 88.6 136 48.5
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 4.3e-16 88.6 132 46.2
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 5.7e-16 88.2 110 53.6
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 5.7e-16 88.2 111 59.5
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 5.7e-16 88.2 108 54.6
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 7.4e-16 87.8 151 44.4
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 7.4e-16 87.8 130 56.9
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 7.4e-16 87.8 119 52.9
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 9.7e-16 87.4 102 56.9
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 9.7e-16 87.4 107 54.2
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 1.3e-15 87.0 104 55.8
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 1.3e-15 87.0 101 52.5
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 3.7e-15 85.5 105 53.3
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 8.2e-15 84.3 111 50.5
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 1.1e-14 84.0 129 49.6
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 1.8e-14 83.2 99 54.5
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 3.1e-14 82.4 129 47.3
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 3.1e-14 82.4 117 46.2
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 3.1e-14 82.4 133 48.1
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 4.1e-14 82.0 143 44.8
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 5.3e-14 81.6 133 49.6
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 9.0e-14 80.9 119 48.7
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 1.2e-13 80.5 129 48.8
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 1.5e-13 80.1 140 45.0
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 2.0e-13 79.7 122 48.4
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 2.0e-13 79.7 97 56.7
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 2.6e-13 79.3 93 53.8
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 4.5e-13 78.6 102 54.9
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 4.5e-13 78.6 104 51.9
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 5.9e-13 78.2 157 42.7
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 1.0e-12 77.4 111 48.6
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 1.0e-12 77.4 104 50.0
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 1.7e-12 76.6 97 53.6
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 8.5e-12 74.3 112 50.0
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 8.5e-12 74.3 133 45.9
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 1.1e-11 73.9 112 50.9
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 4.2e-11 72.0 107 49.5
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 5.5e-11 71.6 97 54.6
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 5.5e-11 71.6 127 42.5
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 5.5e-11 71.6 140 37.9
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 2.5e-08 62.8 135 37.8
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 4.3e-08 62.0 94 48.9
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 5.7e-08 61.6 133 38.3
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 5.7e-08 61.6 135 37.0
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 3.7e-07 58.9 82 51.2
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 6.3e-07 58.2 102 42.2
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 6.3e-07 58.2 127 43.3
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 8.2e-07 57.8 80 53.8
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 1.1e-06 57.4 92 40.2
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.8e-06 56.6 104 43.3
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.3e-06 55.1 120 43.3


User provided reference genes

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