Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G07175 Arabidopsis thaliana HOM05D009317 ORTHO05D011493 8.4e-39 163.3 88 100.0
AL1G17300 Arabidopsis lyrata HOM05D009317 ORTHO05D011493 1.4e-22 109.4 72 84.7
Carub.0001s0647 Capsella rubella HOM05D009317 ORTHO05D011493 2.1e-21 105.5 72 81.9
CARHR006890 Cardamine hirsuta HOM05D009317 ORTHO05D011493 3.5e-21 104.8 72 80.6
C08p02940 Brassica napus HOM05D009317 ORTHO05D011493 6.1e-21 104.0 72 77.8
BolC8t47093H Brassica oleracea HOM05D009317 ORTHO05D011493 6.1e-21 104.0 72 77.8
Thhalv10009263m.g Eutrema salsugineum HOM05D009317 ORTHO05D011493 1.8e-20 102.4 72 80.6
BolC5t29297H Brassica oleracea HOM05D009317 ORTHO05D011493 5.1e-20 100.9 72 79.2
A10p05740 Brassica napus HOM05D009317 ORTHO05D011493 1.1e-19 99.8 72 77.8
BraA10t42835Z Brassica rapa HOM05D009317 ORTHO05D011493 1.1e-19 99.8 72 77.8
Thhalv10009260m.g Eutrema salsugineum HOM05D009317 ORTHO05D011493 1.1e-19 99.8 72 79.2
A08p35730 Brassica napus HOM05D009317 ORTHO05D011493 1.5e-19 99.4 72 73.6
BraA08t35480Z Brassica rapa HOM05D009317 ORTHO05D011493 1.5e-19 99.4 72 73.6
C05p05260 Brassica napus HOM05D009317 ORTHO05D011493 8.2e-18 93.6 73 74.0
THA.LOC109116766 Tarenaya hassleriana HOM05D009317 ORTHO05D011493 5.3e-17 90.9 67 70.1
THA.LOC104800743 Tarenaya hassleriana HOM05D009317 ORTHO05D011493 3.4e-16 88.2 71 67.6
Thhalv10017505m.g Eutrema salsugineum HOM05D009317 ORTHO05D011493 4.3e-11 71.2 61 62.3
Carub.0004s1108 Capsella rubella HOM05D009317 ORTHO05D011493 5.7e-11 70.9 66 63.6
A05p15440 Brassica napus HOM05D009317 ORTHO05D011493 1.3e-10 69.7 55 67.3
BraA05t20461Z Brassica rapa HOM05D009317 ORTHO05D011493 1.3e-10 69.7 55 67.3
C04p20720 Brassica napus HOM05D009317 ORTHO05D011493 2.8e-10 68.6 55 65.5
BolC4t23600H Brassica oleracea HOM05D009317 ORTHO05D011493 2.8e-10 68.6 55 65.5
C04p58840 Brassica napus HOM05D009317 ORTHO05D011493 8.2e-10 67.0 66 60.6
BolC4t27402H Brassica oleracea HOM05D009317 ORTHO05D011493 8.2e-10 67.0 66 60.6
AT2G29995 Arabidopsis thaliana HOM05D009317 ORTHO05D011493 1.1e-09 66.6 64 57.8
Potri.009G072201 Populus trichocarpa HOM05D009283 ORTHO05D011386 1.8e-09 65.9 69 52.2
AL4G24750 Arabidopsis lyrata HOM05D009317 ORTHO05D011493 3.1e-09 65.1 59 59.3
Sp4g12560 Schrenkiella parvula HOM05D009317 ORTHO05D011493 3.1e-09 65.1 65 56.9
A04p22680 Brassica napus HOM05D009317 ORTHO05D011493 4.1e-09 64.7 66 59.1
BraA04t17811Z Brassica rapa HOM05D009317 ORTHO05D011493 4.1e-09 64.7 66 59.1
CARHR123240 Cardamine hirsuta HOM05D009317 ORTHO05D011493 4.1e-09 64.7 66 59.1
Potri.001G277600 Populus trichocarpa HOM05D009283 ORTHO05D011386 5.3e-09 64.3 73 47.9
Sabra16G0171600 Salix brachista HOM05D009283 ORTHO05D011386 2.9e-07 58.5 68 51.5
MD11G1071800 Malus domestica HOM05D009283 ORTHO05D011386 5.0e-07 57.8 74 48.6
Thhalv10015190m.g Eutrema salsugineum HOM05D010158 ORTHO05D014771 1.4e-06 56.2 56 53.6
Prupe.6G055500 Prunus persica HOM05D009283 ORTHO05D011386 2.5e-06 55.5 72 45.8
Gohir.D09G089500 Gossypium hirsutum HOM05D009283 ORTHO05D011386 4.2e-06 54.7 66 48.5
Gorai.006G105700 Gossypium raimondii HOM05D009283 ORTHO05D011386 4.2e-06 54.7 66 48.5


User provided reference genes

Program Settings