Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G06590 Arabidopsis thaliana HOM05D004564 ORTHO05D006106 0.0e+00 1726.5 917 100.0
AL1G16620 Arabidopsis lyrata HOM05D004564 ORTHO05D006106 0.0e+00 1652.1 917 95.9
Carub.0001s0595 Capsella rubella HOM05D004564 ORTHO05D006106 0.0e+00 1582.8 915 92.0
BcaB02g06779 Brassica carinata HOM05D004564 ORTHO05D006106 0.0e+00 1571.2 917 91.5
Sp1g05350 Schrenkiella parvula HOM05D004564 ORTHO05D006106 0.0e+00 1567.4 917 91.2
A10p05220 Brassica napus HOM05D004564 ORTHO05D006106 0.0e+00 1550.4 917 90.2
C05p04820 Brassica napus HOM05D004564 ORTHO05D006106 0.0e+00 1547.7 923 90.0
BraA10t42789Z Brassica rapa HOM05D004564 ORTHO05D006106 0.0e+00 1545.4 924 89.6
BolC5t29255H Brassica oleracea HOM05D004564 ORTHO05D006106 0.0e+00 1544.6 923 89.7
Aa31LG1G7670 Aethionema arabicum HOM05D004564 ORTHO05D006106 0.0e+00 1498.8 916 87.1
Thhalv10006743m.g Eutrema salsugineum HOM05D004564 ORTHO05D006106 0.0e+00 1485.7 917 87.4
A09p66910 Brassica napus HOM05D004564 ORTHO05D006106 0.0e+00 1481.5 917 86.7
BraA09t42026Z Brassica rapa HOM05D004564 ORTHO05D006106 0.0e+00 1461.0 946 83.9
C08p51140 Brassica napus HOM05D004564 ORTHO05D006106 0.0e+00 1414.4 918 83.8
BolC8t52640H Brassica oleracea HOM05D004564 ORTHO05D006106 0.0e+00 1403.3 936 82.2
THA.LOC104800817 Tarenaya hassleriana HOM05D004564 ORTHO05D006106 0.0e+00 1357.4 914 79.6
Thecc.01G168400 Theobroma cacao HOM05D004564 ORTHO05D006106 0.0e+00 1170.2 917 69.1
Prupe.3G177800 Prunus persica HOM05D004564 ORTHO05D006106 0.0e+00 1165.6 921 68.2
CiPaw.04G137200 Carya illinoinensis HOM05D004564 ORTHO05D006106 0.0e+00 1163.3 918 66.1
CANSAT25G1027 Cannabis sativa HOM05D004564 ORTHO05D006106 0.0e+00 1156.0 916 66.8
MD09G1148300 Malus domestica HOM05D004564 ORTHO05D006106 0.0e+00 1151.0 920 67.9
CsaV3_4G007910 Cucumis sativus L. HOM05D004564 ORTHO05D006106 0.0e+00 1147.1 920 65.0
Gorai.007G175000 Gossypium raimondii HOM05D004564 ORTHO05D006106 0.0e+00 1147.1 917 67.7
Gohir.A11G157200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 0.0e+00 1143.3 917 67.5
CSS0004840 Camellia sinensis var. sinensis HOM05D004564 ORTHO05D006106 0.0e+00 1141.7 913 65.0
Gohir.D11G164200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 0.0e+00 1141.3 917 67.4
TWI59G1136 Tripterygium wilfordii HOM05D004564 ORTHO05D006106 0.0e+00 1139.0 921 64.5
QL08p045017 Quercus lobata HOM05D004564 ORTHO05D006106 0.0e+00 1137.5 992 61.9
TAR369G0268 Trochodendron aralioides HOM05D004564 ORTHO05D006106 0.0e+00 1129.0 912 66.0
arahy.Tifrunner.gnm1.ann1.THQ3DC Arachis hypogaea HOM05D004564 ORTHO05D006106 0.0e+00 1128.6 913 66.3
Phvul.008G194400 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 0.0e+00 1128.6 918 66.2
VMungo0647G1349 Vigna mungo HOM05D004564 ORTHO05D006106 0.0e+00 1128.6 916 65.7
Glyma.14G030500 Glycine max HOM05D004564 ORTHO05D006106 0.0e+00 1127.9 916 66.6
Duzib133G1099 Durio zibethinus HOM05D004564 ORTHO05D006106 0.0e+00 1124.8 916 67.1
arahy.Tifrunner.gnm1.ann1.PNUX2Z Arachis hypogaea HOM05D004564 ORTHO05D006106 0.0e+00 1123.6 920 66.0
GSVIVG01020836001 Vitis vinifera HOM05D004564 ORTHO05D006106 0.0e+00 1122.8 918 65.1
Actinidia32511 Actinidia chinensis HOM05D004564 ORTHO05D006106 0.0e+00 1122.5 920 64.1
Ca_06263_v3 Cicer arietinum L. HOM05D004564 ORTHO05D006106 0.0e+00 1121.7 955 63.5
Medtr5g091020 Medicago truncatula HOM05D004564 ORTHO05D006106 0.0e+00 1109.0 916 65.4
RcHm_v2.0_Chr2g0152251 Rosa chinensis HOM05D004564 ORTHO05D006106 0.0e+00 1109.0 917 64.2
TPR.G10155 Trifolium pratense HOM05D004564 ORTHO05D006106 0.0e+00 1109.0 916 64.1
Potri.004G081200 Populus trichocarpa HOM05D004564 ORTHO05D006106 0.0e+00 1105.1 906 63.9
Cpa.g.sc119.28 Carica papaya HOM05D004564 ORTHO05D006106 0.0e+00 1099.7 922 64.5
LjContig00049g0003012 Lotus japonicus HOM05D004564 ORTHO05D006106 0.0e+00 1095.1 928 63.3
COL.COLO4_38399 Corchorus olitorius HOM05D004564 ORTHO05D006106 0.0e+00 1089.3 940 64.0
Manes.01G123700 Manihot esculenta HOM05D004564 ORTHO05D006106 0.0e+00 1088.6 909 63.9
FvH4_6g38720 Fragaria vesca HOM05D004564 ORTHO05D006106 0.0e+00 1087.4 917 62.8
Cc05_g01430 Coffea canephora HOM05D004564 ORTHO05D006106 0.0e+00 1083.6 924 60.9
Sabra04G0053900 Salix brachista HOM05D004564 ORTHO05D006106 0.0e+00 1081.6 924 62.2
Dinv03683 Davidia involucrata HOM05D004564 ORTHO05D006106 0.0e+00 1081.2 851 66.3
FAN09G3866 Fragaria x ananassa HOM05D004564 ORTHO05D006106 0.0e+00 1078.5 931 61.9
DCAR_016941 Daucus carota HOM05D004564 ORTHO05D006106 0.0e+00 1075.1 918 60.9
Migut.M00072 Erythranthe guttata HOM05D004564 ORTHO05D006106 0.0e+00 1075.1 912 62.9
MSTRG.6616 Avicennia marina HOM05D004564 ORTHO05D006106 1.9e-311 1072.4 920 60.2
Lj1g0025808 Lotus japonicus HOM05D004564 ORTHO05D006106 6.2e-310 1067.4 927 61.7
FAN14G4455 Fragaria x ananassa HOM05D004564 ORTHO05D006106 8.1e-310 1067.0 931 61.7
Sopen08g021130 Solanum pennellii HOM05D004564 ORTHO05D006106 8.9e-309 1063.5 910 60.3
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 1.6e-305 1052.7 921 59.4
PGR042G1847 Punica granatum HOM05D004564 ORTHO05D006106 3.5e-305 1051.6 918 62.0
PSO170G0418 Papaver somniferum HOM05D004564 ORTHO05D006106 6.0e-305 1050.8 904 61.1
PSO782G0424 Papaver somniferum HOM05D004564 ORTHO05D006106 3.9e-304 1048.1 905 60.8
ClCG07G010420 Citrullus lanatus HOM05D004564 ORTHO05D006106 9.6e-303 1043.5 875 63.8
Haze_13558 Corylus avellana HOM05D004564 ORTHO05D006106 3.1e-301 1038.5 1078 55.3
Solyc08g067190.4 Solanum lycopersicum HOM05D004564 ORTHO05D006106 5.8e-300 1034.2 961 57.3
Nn7g37923 Nelumbo nucifera HOM05D004564 ORTHO05D006106 1.1e-293 1013.4 861 61.4
Lsat_1_v5_gn_9_29980 Lactuca sativa HOM05D004564 ORTHO05D006106 6.9e-293 1010.7 916 58.8
FAN05G0785 Fragaria x ananassa HOM05D004564 ORTHO05D006106 1.7e-291 1006.1 1084 52.8
CAN.G348.3 Capsicum annuum HOM05D004564 ORTHO05D006106 2.2e-291 1005.7 869 60.0
CARHR006200 Cardamine hirsuta HOM05D004564 ORTHO05D006106 1.9e-290 1002.7 589 92.9
SGA_v2.0_scaffold181G39711 Striga asiatica HOM05D004564 ORTHO05D006106 1.9e-290 1002.7 992 57.0
ECA247G1853 Erigeron canadensis HOM05D004564 ORTHO05D006106 2.4e-290 1002.3 909 58.1
HanXRQChr10g0292821 Helianthus annuus HOM05D004564 ORTHO05D006106 2.1e-289 999.2 899 58.7
EL10Ac1g01740 Beta vulgaris HOM05D004564 ORTHO05D006106 2.5e-282 975.7 923 56.7
Sc06g0007580 Simmondsia chinensis HOM05D004564 ORTHO05D006106 3.1e-277 958.7 915 55.7
Aqoxy1G01488 Aquilegia oxysepala HOM05D004564 ORTHO05D006106 4.5e-276 954.9 926 57.9
Rhsim12G0010800 Rhododendron simsii HOM05D004564 ORTHO05D006106 3.2e-274 948.7 911 57.3
Ciclev10030760m.g Citrus clementina HOM05D004564 ORTHO05D006106 3.9e-272 941.8 762 65.1
Cfa023356 Carpinus fangiana HOM05D004564 ORTHO05D006106 1.9e-266 922.9 934 56.2
Nitab4.5_0004346g0010 Nicotiana tabacum HOM05D004564 ORTHO05D006106 2.7e-265 919.1 873 56.0
Sed0025117 Sechium edule HOM05D004564 ORTHO05D006106 3.6e-265 918.7 761 63.5
AUR62022316 Chenopodium quinoa HOM05D004564 ORTHO05D006106 1.0e-264 917.1 920 54.0
AUR62034940 Chenopodium quinoa HOM05D004564 ORTHO05D006106 7.4e-263 911.0 864 56.1
Hund26665 Selenicereus undatus HOM05D004564 ORTHO05D006106 9.1e-261 904.0 1007 50.8
Nitab4.5_0000508g0020 Nicotiana tabacum HOM05D004564 ORTHO05D006106 5.5e-258 894.8 919 54.2
Ah.05g168440 Amaranthus hybridus HOM05D004564 ORTHO05D006106 1.7e-254 883.2 909 54.5
Lj1A591G26 Lonicera japonica HOM05D004564 ORTHO05D006106 1.8e-245 853.2 701 64.8
Eucgr.A02026 Eucalyptus grandis HOM05D004564 ORTHO05D006106 1.2e-244 850.5 733 66.0
unitig_37.g12587 Utricularia gibba HOM05D004564 ORTHO05D006106 1.6e-244 850.1 948 49.1
Oeu022916.1 Olea europaea HOM05D004564 ORTHO05D006106 2.5e-242 842.8 1151 43.4
Atru.chr6.2044 Acer truncatum HOM05D004564 ORTHO05D006106 7.2e-242 841.3 635 72.9
Os12g0626300 Oryza sativa ssp. japonica HOM05D004564 ORTHO05D006106 1.2e-236 823.9 931 50.7
Peaxi162Scf00922g00319 Petunia axillaris HOM05D004564 ORTHO05D006106 2.0e-231 806.6 778 55.4
SalBow1G3587 Salvia bowleyana HOM05D004564 ORTHO05D006106 1.3e-230 803.9 728 58.1
MELO3C016147.2 Cucumis melo HOM05D004564 ORTHO05D006106 3.3e-226 789.3 644 63.7
Zm00001eb128180 Zea mays HOM05D004564 ORTHO05D006106 2.1e-225 786.6 925 49.0
BcaNung07074 Brassica carinata HOM05D004564 ORTHO05D006106 3.9e-219 765.8 441 94.6
QL93p2016_0008 Quercus lobata HOM05D004564 ORTHO05D006106 2.0e-212 743.4 601 64.2
vmacro08736 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 1.3e-182 644.4 530 63.6
Lalb_Chr10g0106571 Lupinus albus HOM05D004564 ORTHO05D006106 2.7e-180 636.7 573 58.1
Psat2g017120 Pisum sativum HOM05D004564 ORTHO05D006106 1.8e-160 570.9 422 69.4
Psat2g017160 Pisum sativum HOM05D004564 ORTHO05D006106 1.1e-157 561.6 487 60.8
ATR0763G133 Amborella trichopoda HOM05D004564 ORTHO05D006106 1.4e-152 544.7 509 59.5
Pp3c3_33140 Physcomitrium patens HOM05D004564 ORTHO05D006106 2.4e-152 543.9 908 39.1
MBI18_g13604_MAGBIO Magnolia biondii HOM05D004564 ORTHO05D006106 1.0e-147 528.5 913 41.2
FAN02G2671 Fragaria x ananassa HOM05D004564 ORTHO05D006106 3.5e-135 486.9 465 57.6
AagrBONN_evm.TU.Sc2ySwM_228.5505 Anthoceros agrestis HOM05D004564 ORTHO05D006106 1.8e-128 464.5 919 35.3
Hma1.2p1_0539F.1_g174590 Hydrangea macrophylla HOM05D004564 ORTHO05D006106 5.9e-127 459.5 413 59.3
SMO174G0184 Selaginella moellendorffii HOM05D004564 ORTHO05D006106 7.7e-127 459.1 903 35.4
SHI30099 Sapria himalayana HOM05D004564 ORTHO05D006106 6.8e-123 446.0 605 44.3
Mapoly0007s0190 Marchantia polymorpha HOM05D004564 ORTHO05D006106 1.1e-120 438.7 910 34.0
Lalb_Chr10g0106581 Lupinus albus HOM05D004564 ORTHO05D006106 3.8e-110 403.7 298 72.5
vmacro08737 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 2.9e-105 387.5 636 39.6
arahy.Tifrunner.gnm1.ann1.UKG9X7 Arachis hypogaea HOM05D004564 ORTHO05D006106 7.5e-90 336.3 351 52.7
HPP92_001899 Vanilla planifolia HOM05D004564 ORTHO05D006106 9.9e-90 335.9 677 36.8
CBR_g44342 Chara braunii HOM05D000019 ORTHO05D000353 1.1e-88 332.4 567 39.3
GSVIVG01013077001 Vitis vinifera HOM05D004564 ORTHO05D006106 1.3e-81 308.9 235 72.3
CAN.G3149.1 Capsicum annuum HOM05D004564 ORTHO05D006106 3.4e-74 284.3 228 64.5
SEGI_14916 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 1.3e-73 282.3 266 56.0
MD17G1134700 Malus domestica HOM05D004564 ORTHO05D006106 1.8e-67 261.9 284 53.5
Glyma.02G284500 Glycine max HOM05D004564 ORTHO05D006106 2.0e-66 258.5 211 73.9
HPP92_001867 Vanilla planifolia HOM05D004564 ORTHO05D006106 1.7e-65 255.4 455 41.8
TAR626G0359 Trochodendron aralioides HOM05D004564 ORTHO05D006106 3.4e-58 231.1 151 72.2
BcaNung07000 Brassica carinata HOM05D004564 ORTHO05D006106 2.8e-52 211.5 118 93.2
CDE02G3007 Ceratophyllum demersum HOM05D004564 ORTHO05D006106 3.2e-40 171.4 147 61.2
MD17G1134600 Malus domestica HOM05D004564 ORTHO05D006106 2.7e-39 168.3 266 42.9
Peaxi162Scf00922g00318 Petunia axillaris HOM05D004564 ORTHO05D006106 3.9e-38 164.5 120 69.2
TAR626G0994 Trochodendron aralioides HOM05D004564 ORTHO05D006106 1.4e-32 146.0 98 75.5
SHI30097 Sapria himalayana HOM05D004564 ORTHO05D006106 1.5e-29 136.0 224 37.5
ATR0763G243 Amborella trichopoda HOM05D004564 ORTHO05D006106 2.4e-27 128.6 120 50.0
Rhsim02G0232100 Rhododendron simsii HOM05D000252 ORTHO05D000307 3.0e-22 111.7 143 48.3
ATR0820G167 Amborella trichopoda HOM05D004564 ORTHO05D006106 3.7e-20 104.8 120 48.3
ATR0598G245 Amborella trichopoda HOM05D004564 ORTHO05D006106 4.5e-18 97.8 105 49.5
arahy.Tifrunner.gnm1.ann1.RHC2N4 Arachis hypogaea HOM05D000056 ORTHO05D006106 1.3e-17 96.3 160 38.1
TPR.G10922 Trifolium pratense HOM05D004564 ORTHO05D006106 3.8e-17 94.7 82 64.6
Phvul.001G172501 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 1.9e-16 92.4 132 38.6
ATR0763G128 Amborella trichopoda HOM05D004564 ORTHO05D006106 7.2e-16 90.5 77 58.4
Lalb_Chr10g0106561 Lupinus albus HOM05D004564 ORTHO05D006106 4.7e-15 87.8 58 65.5
Rhsim12G0011200 Rhododendron simsii HOM05D004564 ORTHO05D000827 1.4e-14 86.3 100 53.0
Lj5g0002046 Lotus japonicus HOM05D004564 ORTHO05D000491 1.3e-12 79.7 181 33.1
Rhsim12G0011100 Rhododendron simsii HOM05D004564 ORTHO05D006106 1.1e-08 66.6 64 48.4
Rhsim12G0011500 Rhododendron simsii HOM05D004564 ORTHO05D006106 1.9e-08 65.9 81 40.7
SEGI_30840 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 4.2e-08 64.7 113 34.5
Zm00001eb370760 Zea mays HOM05D004564 ORTHO05D006106 5.5e-08 64.3 65 50.8
Rhsim12G0011600 Rhododendron simsii HOM05D004564 ORTHO05D000827 7.2e-08 63.9 66 59.1
TPR.G35705 Trifolium pratense HOM05D023930 ORTHO05D018030 2.7e-07 62.0 132 37.9
TPR.G7402 Trifolium pratense HOM05D023930 ORTHO05D006106 3.6e-07 61.6 132 38.6
SEGI_33722 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 2.3e-06 58.9 105 42.9
MCO11G813 Micromonas commoda HOM05D004564 ORTHO05D006106 8.8e-06 57.0 403 20.6


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