Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G05835 Arabidopsis thaliana HOM05D009409 ORTHO05D010962 5.1e-69 264.2 128 100.0
AL1G15770 Arabidopsis lyrata HOM05D009409 ORTHO05D010962 1.2e-65 253.1 128 95.3
Carub.0001s0519 Capsella rubella HOM05D009409 ORTHO05D010962 1.9e-60 235.7 128 87.5
Thhalv10009110m.g Eutrema salsugineum HOM05D009409 ORTHO05D010962 6.2e-59 230.7 124 89.5
CARHR005380 Cardamine hirsuta HOM05D009409 ORTHO05D010962 1.1e-58 229.9 128 88.3
BcaB03g13418 Brassica carinata HOM05D009409 ORTHO05D010962 2.6e-57 225.3 128 86.7
BraA08t35531Z Brassica rapa HOM05D009409 ORTHO05D010962 4.5e-57 224.6 128 86.7
C08p02250 Brassica napus HOM05D009409 ORTHO05D010962 7.6e-57 223.8 128 85.9
A08p36270 Brassica napus HOM05D009409 ORTHO05D010962 1.7e-56 222.6 124 87.9
Sp1g04650 Schrenkiella parvula HOM05D009409 ORTHO05D010962 4.9e-56 221.1 130 85.4
Aa31LG1G8510 Aethionema arabicum HOM05D000590 ORTHO05D005739 1.1e-42 176.8 114 74.6
THA.LOC104800909 Tarenaya hassleriana HOM05D009409 ORTHO05D010962 1.3e-35 153.3 131 60.3
Actinidia32945 Actinidia chinensis HOM05D009409 ORTHO05D010962 5.7e-28 127.9 128 51.6
ATR0215G028 Amborella trichopoda HOM05D009409 ORTHO05D010962 9.7e-28 127.1 123 52.0
CiPaw.02G060100 Carya illinoinensis HOM05D009409 ORTHO05D010962 1.3e-27 126.7 112 57.1
Dinv44212 Davidia involucrata HOM05D001648 ORTHO05D010962 4.8e-27 124.8 123 50.4
FvH4_4g12240 Fragaria vesca HOM05D009409 ORTHO05D010962 1.1e-26 123.6 124 51.6
FAN12G0619 Fragaria x ananassa HOM05D009409 ORTHO05D010962 1.1e-26 123.6 124 51.6
FAN12G4115 Fragaria x ananassa HOM05D009409 ORTHO05D010962 1.1e-26 123.6 124 51.6
CANSAT78G0067 Cannabis sativa HOM05D009409 ORTHO05D010962 1.4e-26 123.2 124 52.4
TWI38G1359 Tripterygium wilfordii HOM05D009409 ORTHO05D010962 4.1e-26 121.7 129 48.8
Sabra02G0177800 Salix brachista HOM05D009409 ORTHO05D010962 1.2e-25 120.2 125 53.6
Manes.01G001150 Manihot esculenta HOM05D001648 ORTHO05D010962 1.5e-25 119.8 125 52.8
FAN22G1980 Fragaria x ananassa HOM05D009409 ORTHO05D010962 2.0e-25 119.4 124 50.0
MD04G1028300 Malus domestica HOM05D009409 ORTHO05D010962 2.6e-25 119.0 125 50.4
Prupe.1G177700 Prunus persica HOM05D009409 ORTHO05D010962 4.5e-25 118.2 133 47.4
RcHm_v2.0_Chr4g0409991 Rosa chinensis HOM05D009409 ORTHO05D010962 7.7e-25 117.5 124 50.0
Ciclev10022791m.g Citrus clementina HOM05D001648 ORTHO05D010962 1.7e-24 116.3 126 46.0
Atru.chr3.1718 Acer truncatum HOM05D001648 ORTHO05D010962 2.2e-24 115.9 126 50.0
Eucgr.H00453 Eucalyptus grandis HOM05D009409 ORTHO05D010962 3.8e-24 115.2 112 51.8
Potri.002G233000 Populus trichocarpa HOM05D009409 ORTHO05D010962 5.0e-24 114.8 121 51.2
Nn7g37260 Nelumbo nucifera HOM05D001648 ORTHO05D010962 1.1e-23 113.6 124 50.8
PSO017G4925 Papaver somniferum HOM05D009409 ORTHO05D010962 2.5e-23 112.5 123 48.8
GSVIVG01031688001 Vitis vinifera HOM05D009409 ORTHO05D010962 5.5e-23 111.3 127 46.5
PSO675G2176 Papaver somniferum HOM05D009409 ORTHO05D010962 7.2e-23 110.9 123 48.8
QL10p044357 Quercus lobata HOM05D009409 ORTHO05D010962 9.4e-23 110.5 112 53.6
ECA248G0842 Erigeron canadensis HOM05D001648 ORTHO05D010962 8.0e-22 107.5 128 41.4
MBI07_g00617_MAGBIO Magnolia biondii HOM05D001648 ORTHO05D010962 1.0e-21 107.1 129 47.3
Haze_11080 Corylus avellana HOM05D001648 ORTHO05D010962 5.2e-21 104.8 99 50.5
Aqoxy2G04037 Aquilegia oxysepala HOM05D001648 ORTHO05D010962 8.8e-21 104.0 99 49.5
TAR362G1339 Trochodendron aralioides HOM05D001648 ORTHO05D010962 1.1e-20 103.6 106 50.0
BolC8t52685H Brassica oleracea HOM05D000590 ORTHO05D005739 1.5e-20 103.2 75 73.3
Ah.12g062290 Amaranthus hybridus HOM05D001648 ORTHO05D010962 2.6e-20 102.4 128 43.8
C08p51570 Brassica napus HOM05D000590 ORTHO05D005739 5.7e-20 101.3 75 72.0
EL10Ac5g11616 Beta vulgaris HOM05D001648 ORTHO05D010962 4.1e-18 95.1 128 41.4
MD08G1151500 Malus domestica HOM05D001817 ORTHO05D001647 1.6e-09 66.6 82 39.0
THA.LOC104818605 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 6.5e-08 61.2 83 41.0
THA.LOC104818607 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 6.5e-08 61.2 83 41.0
THA.LOC104818611 Tarenaya hassleriana HOM05D001817 ORTHO05D001647 6.5e-08 61.2 83 41.0
QL07p000848 Quercus lobata HOM05D001817 ORTHO05D001647 2.5e-07 59.3 122 31.1
QL07p000880 Quercus lobata HOM05D001817 ORTHO05D001647 2.5e-07 59.3 122 31.1
Thecc.02G154600 Theobroma cacao HOM05D001817 ORTHO05D001647 4.2e-07 58.5 117 30.8
CiPaw.08G009300 Carya illinoinensis HOM05D001817 ORTHO05D001647 5.5e-07 58.2 122 32.8
Lj4g0026101 Lotus japonicus HOM05D001648 ORTHO05D001657 5.5e-07 58.2 73 39.7
Peaxi162Scf00043g00032 Petunia axillaris HOM05D001648 ORTHO05D001657 5.5e-07 58.2 71 38.0
QL12p013638 Quercus lobata HOM05D001817 ORTHO05D001647 5.5e-07 58.2 77 39.0
DCAR_030847 Daucus carota HOM05D001648 ORTHO05D001657 7.2e-07 57.8 98 34.7
Duzib192G0395 Durio zibethinus HOM05D001648 ORTHO05D001657 9.4e-07 57.4 76 42.1
MD08G1079500 Malus domestica HOM05D001817 ORTHO05D001647 9.4e-07 57.4 82 34.1
TWI63G0410 Tripterygium wilfordii HOM05D001817 ORTHO05D001647 9.4e-07 57.4 105 31.4
BcaC05g27843 Brassica carinata HOM05D001648 ORTHO05D001657 1.6e-06 56.6 72 43.1
C05p38400 Brassica napus HOM05D001648 ORTHO05D001657 1.6e-06 56.6 72 43.1
BolC5t32576H Brassica oleracea HOM05D001648 ORTHO05D001657 1.6e-06 56.6 72 43.1
ClCG01G021330 Citrullus lanatus HOM05D001648 ORTHO05D001657 1.6e-06 56.6 77 44.2
Duzib052G0237 Durio zibethinus HOM05D001817 ORTHO05D001647 1.6e-06 56.6 116 32.8
BcaB03g13722 Brassica carinata HOM05D001648 ORTHO05D001657 2.7e-06 55.8 72 41.7
A05p24730 Brassica napus HOM05D001648 ORTHO05D001657 3.6e-06 55.5 72 41.7
BraA05t21356Z Brassica rapa HOM05D001648 ORTHO05D001657 3.6e-06 55.5 72 41.7
MELO3C014490.2 Cucumis melo HOM05D001648 ORTHO05D001657 3.6e-06 55.5 104 35.6
Atru.chr6.250 Acer truncatum HOM05D001817 ORTHO05D001647 4.7e-06 55.1 99 32.3
FvH4_2g28710 Fragaria vesca HOM05D001817 ORTHO05D001647 4.7e-06 55.1 132 29.5
VMungo1215G3298 Vigna mungo HOM05D001648 ORTHO05D001657 4.7e-06 55.1 72 40.3
MELO3C033004.2 Cucumis melo HOM05D001817 ORTHO05D001647 6.1e-06 54.7 118 30.5
FvH4_2g28690 Fragaria vesca HOM05D001817 ORTHO05D001647 8.0e-06 54.3 93 32.3


User provided reference genes

Program Settings