Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 7.2e-49 196.8 92 100.0
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 2.7e-48 194.9 92 97.8
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 2.2e-45 185.3 87 96.6
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 3.7e-45 184.5 86 96.5
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 4.8e-45 184.1 87 95.4
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 4.8e-45 184.1 87 95.4
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 4.8e-45 184.1 87 95.4
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 6.3e-45 183.7 86 96.5
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 6.3e-45 183.7 86 96.5
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 6.3e-45 183.7 86 96.5
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 1.8e-44 182.2 86 95.3
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 1.8e-44 182.2 86 95.3
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 1.8e-44 182.2 86 95.3
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 1.8e-44 182.2 86 95.3
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 5.3e-44 180.6 86 94.2
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 5.9e-43 177.2 87 92.0
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 3.2e-41 171.4 87 90.8
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 4.7e-40 167.5 87 86.2
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 7.9e-40 166.8 87 92.0
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 1.0e-39 166.4 87 87.4
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 1.4e-39 166.0 87 86.2
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 1.4e-39 166.0 87 88.5
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 1.4e-39 166.0 87 88.5
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 1.8e-39 165.6 87 87.4
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 2.3e-39 165.2 87 87.4
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 3.0e-39 164.9 87 86.2
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 3.0e-39 164.9 87 86.2
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 3.0e-39 164.9 87 87.4
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 3.9e-39 164.5 87 85.1
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 3.9e-39 164.5 87 85.1
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 3.9e-39 164.5 87 85.1
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 3.9e-39 164.5 87 86.2
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 6.7e-39 163.7 85 88.2
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 6.7e-39 163.7 85 88.2
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 6.7e-39 163.7 85 88.2
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 6.7e-39 163.7 85 88.2
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 8.8e-39 163.3 87 85.1
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 3.3e-38 161.4 84 86.9
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 4.4e-38 161.0 87 85.1
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 4.4e-38 161.0 86 87.2
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 5.7e-38 160.6 87 85.1
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 7.4e-38 160.2 87 83.9
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 9.7e-38 159.8 82 87.8
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 1.3e-37 159.5 87 83.9
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 1.3e-37 159.5 87 81.6
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 1.3e-37 159.5 87 87.4
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 1.7e-37 159.1 87 81.6
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 1.7e-37 159.1 82 89.0
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 2.2e-37 158.7 82 89.0
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 2.8e-37 158.3 87 83.9
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 2.8e-37 158.3 87 85.1
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 2.8e-37 158.3 89 85.4
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 3.7e-37 157.9 87 88.5
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 3.7e-37 157.9 82 87.8
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 3.7e-37 157.9 87 82.8
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 4.8e-37 157.5 90 81.1
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 4.8e-37 157.5 84 84.5
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 6.3e-37 157.1 84 85.7
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 6.3e-37 157.1 88 86.4
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 8.2e-37 156.8 83 83.1
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 8.2e-37 156.8 86 82.6
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 8.2e-37 156.8 87 86.2
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 8.2e-37 156.8 86 84.9
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 8.2e-37 156.8 86 84.9
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 1.1e-36 156.4 82 87.8
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 1.8e-36 155.6 84 85.7
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 2.4e-36 155.2 93 78.5
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 3.1e-36 154.8 84 84.5
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 3.1e-36 154.8 87 81.6
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 3.1e-36 154.8 87 81.6
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 3.1e-36 154.8 89 80.9
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 4.1e-36 154.5 87 83.9
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 5.3e-36 154.1 86 81.4
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 1.2e-35 152.9 81 87.7
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 2.0e-35 152.1 81 84.0
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 4.5e-35 151.0 82 84.1
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 4.5e-35 151.0 82 81.7
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 4.5e-35 151.0 83 83.1
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 5.9e-35 150.6 81 82.7
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 1.7e-34 149.1 85 82.4
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 1.7e-34 149.1 87 78.2
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 1.7e-34 149.1 77 87.0
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 2.2e-34 148.7 82 82.9
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 2.2e-34 148.7 88 81.8
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 3.8e-34 147.9 84 82.1
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 5.0e-34 147.5 87 80.5
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 5.0e-34 147.5 87 81.6
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 8.5e-34 146.7 87 81.6
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 8.5e-34 146.7 86 77.9
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 1.5e-33 146.0 84 82.1
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 2.5e-33 145.2 90 76.7
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.6e-32 142.5 86 79.1
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 3.6e-32 141.4 86 77.9
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 3.6e-32 141.4 113 65.5
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 1.4e-31 139.4 87 79.3
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 8.8e-31 136.7 78 79.5
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 4.4e-30 134.4 86 75.6
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 1.6e-27 125.9 65 90.8
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.5e-27 124.4 68 80.9
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 1.7e-26 122.5 64 87.5
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 1.5e-25 119.4 62 85.5
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 4.2e-25 117.9 61 86.9
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 4.7e-24 114.4 61 80.3
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 1.3e-18 96.3 49 85.7
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 2.9e-18 95.1 56 73.2
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 1.5e-17 92.8 63 61.9
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 4.0e-15 84.7 41 90.2
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 4.0e-15 84.7 58 65.5
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 1.1e-12 76.6 65 55.4
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 2.4e-12 75.5 38 89.5
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.2e-11 73.2 40 82.5
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 1.6e-11 72.8 41 82.9
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 2.9e-10 68.6 40 75.0


User provided reference genes

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