Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 8.5e-265 916.4 443 100.0
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 5.5e-256 887.1 448 96.4
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 6.3e-252 873.6 452 93.8
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 3.7e-244 847.8 448 92.2
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 1.1e-240 836.3 449 91.5
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 1.1e-240 836.3 449 91.5
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 5.6e-240 833.9 449 91.3
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 2.1e-239 832.0 451 91.1
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 4.4e-237 824.3 452 88.1
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 4.0e-230 801.2 452 86.9
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 2.4e-219 765.4 429 85.5
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 1.1e-200 703.4 399 87.5
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 2.2e-196 689.1 419 76.4
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 4.9e-196 688.0 419 76.8
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 8.4e-196 687.2 420 78.8
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 8.4e-196 687.2 419 78.3
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 2.5e-195 685.6 422 78.0
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 2.5e-195 685.6 422 76.3
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 7.1e-195 684.1 418 77.8
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 1.6e-194 682.9 425 77.2
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 2.7e-194 682.2 434 74.9
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 3.5e-194 681.8 424 76.4
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 1.5e-192 676.4 425 75.8
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 2.5e-192 675.6 422 76.8
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 3.3e-192 675.2 437 73.5
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 3.3e-192 675.2 422 75.1
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 3.3e-192 675.2 435 72.4
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 7.4e-192 674.1 421 76.7
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 9.6e-192 673.7 419 74.7
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.3e-191 673.3 419 76.1
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 1.6e-191 672.9 419 76.1
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 2.1e-191 672.5 430 74.0
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 2.1e-191 672.5 430 74.0
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 2.1e-191 672.5 422 74.2
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 3.7e-191 671.8 423 74.9
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 4.8e-191 671.4 428 72.7
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 6.2e-191 671.0 424 75.5
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 1.1e-190 670.2 416 77.2
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 9.0e-190 667.2 427 73.1
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 5.8e-189 664.5 431 74.5
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 1.0e-188 663.7 421 74.3
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 1.0e-188 663.7 427 72.8
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 1.7e-188 662.9 422 75.1
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 1.7e-188 662.9 421 74.8
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 3.8e-188 661.8 421 75.8
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 8.4e-188 660.6 424 73.6
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.4e-187 659.8 440 73.2
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 1.4e-187 659.8 421 75.8
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 2.5e-187 659.1 409 77.3
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 3.2e-187 658.7 481 68.6
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 4.2e-187 658.3 420 74.0
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 7.1e-187 657.5 419 75.9
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 2.1e-186 656.0 425 72.5
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 3.5e-186 655.2 420 73.8
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 1.0e-185 653.7 425 72.0
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 6.7e-185 651.0 420 73.3
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 8.7e-185 650.6 420 73.8
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 5.7e-184 647.9 425 74.1
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 2.4e-182 642.5 447 70.2
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 8.5e-180 634.0 420 72.1
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 2.2e-172 609.4 362 80.7
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 7.2e-171 604.4 368 77.2
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 9.4e-171 604.0 423 70.4
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 7.4e-168 594.3 406 71.7
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.3e-167 593.6 358 79.1
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 8.2e-167 590.9 389 73.8
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 1.1e-166 590.5 418 68.2
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 2.4e-166 589.3 565 55.8
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 7.0e-166 587.8 547 57.6
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 9.1e-166 587.4 422 66.1
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.5e-165 585.5 416 68.8
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 6.5e-164 581.3 406 66.7
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 1.2e-162 577.0 380 72.4
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 4.7e-162 575.1 378 73.0
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.8e-158 563.1 436 65.6
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 7.2e-155 551.2 390 68.7
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 1.0e-145 520.8 358 69.8
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 3.4e-144 515.8 347 70.3
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 1.1e-142 510.8 320 75.3
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 2.4e-142 509.6 313 76.4
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 4.1e-142 508.8 388 65.2
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 3.3e-139 499.2 355 69.3
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 7.0e-134 481.5 340 69.4
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 4.5e-133 478.8 425 59.3
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 3.6e-122 442.6 285 74.7
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 6.2e-122 441.8 370 60.5
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 1.8e-113 413.7 401 51.1
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 7.6e-112 408.3 410 51.0
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 7.1e-110 401.7 404 51.2
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 1.3e-108 397.5 404 48.8
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 1.1e-105 387.9 315 61.6
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 4.9e-103 379.0 234 76.5
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 4.3e-83 312.8 200 75.0
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 7.4e-83 312.0 230 64.8
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 6.2e-82 308.9 214 67.3
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 1.8e-65 254.2 427 37.2
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 7.9e-61 238.8 395 37.5
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 2.5e-59 233.8 139 76.3
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 2.4e-57 227.3 127 82.7
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 5.9e-56 222.6 171 66.7
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 8.0e-45 185.7 410 31.5
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 2.6e-43 180.6 226 48.2
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 2.8e-42 177.2 179 46.9
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 5.9e-40 169.5 433 32.1
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 4.0e-36 156.8 89 83.1
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 2.2e-34 151.0 89 73.0
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 1.2e-32 145.2 127 56.7
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 1.6e-29 134.8 114 57.9
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 2.8e-26 124.0 122 51.6
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 5.9e-24 116.3 72 69.4
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 5.6e-22 109.8 84 65.5
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 4.9e-18 96.7 65 70.8
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 4.6e-16 90.1 45 91.1
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 1.9e-14 84.7 72 56.9
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 3.3e-14 84.0 56 64.3
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 7.8e-08 62.8 59 49.2
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.9e-06 58.2 35 80.0
BcaB02g06893 Brassica carinata HOM05D000595 ORTHO05D008454 1.9e-06 58.2 50 66.0
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 1.9e-06 58.2 37 75.7
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 1.9e-06 58.2 37 75.7
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 2.5e-06 57.8 53 47.2


User provided reference genes

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