Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G04650 Arabidopsis thaliana HOM05D006492 ORTHO05D008432 0.0e+00 1895.6 998 100.0
AL1G14360 Arabidopsis lyrata HOM05D006492 ORTHO05D008432 0.0e+00 1771.1 1000 93.2
CARHR004030 Cardamine hirsuta HOM05D006492 ORTHO05D008432 0.0e+00 1618.6 998 85.7
Carub.0001s0390 Capsella rubella HOM05D006492 ORTHO05D008432 0.0e+00 1591.2 998 84.2
Thhalv10006668m.g Eutrema salsugineum HOM05D006492 ORTHO05D008432 0.0e+00 1588.2 1017 83.2
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 0.0e+00 1584.3 992 84.3
C08p01350 Brassica napus HOM05D006492 ORTHO05D008432 0.0e+00 1539.2 999 81.4
BolC8t46943H Brassica oleracea HOM05D006492 ORTHO05D008432 0.0e+00 1536.2 999 81.3
BraA08t35581Z Brassica rapa HOM05D006492 ORTHO05D008432 0.0e+00 1533.5 997 81.2
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 0.0e+00 1507.7 987 80.5
A10p03080 Brassica napus HOM05D006492 ORTHO05D008432 0.0e+00 1492.2 999 79.4
BcaC07g36892 Brassica carinata HOM05D006492 ORTHO05D008432 0.0e+00 1324.7 896 79.7
Aa31LG1G20220 Aethionema arabicum HOM05D006492 ORTHO05D008432 0.0e+00 1322.8 1008 70.9
THA.LOC104816017 Tarenaya hassleriana HOM05D006492 ORTHO05D008432 0.0e+00 1191.0 1002 65.4
BraA10t42581Z Brassica rapa HOM05D006492 ORTHO05D008432 1.2e-282 976.9 1012 56.7
Potri.003G175300 Populus trichocarpa HOM05D006492 ORTHO05D008432 7.3e-256 887.9 996 49.6
Thecc.04G212600 Theobroma cacao HOM05D006492 ORTHO05D008432 1.1e-254 884.0 1008 48.7
Potri.001G053000 Populus trichocarpa HOM05D006492 ORTHO05D008432 5.8e-253 878.2 998 49.3
Manes.15G049000 Manihot esculenta HOM05D006492 ORTHO05D008432 5.4e-251 871.7 992 48.2
Prupe.1G060300 Prunus persica HOM05D006492 ORTHO05D008432 1.1e-246 857.4 1000 47.1
QL05p063769 Quercus lobata HOM05D006492 ORTHO05D008432 3.1e-246 855.9 1043 47.0
Haze_11549 Corylus avellana HOM05D006492 ORTHO05D008432 2.6e-245 852.8 996 47.7
Gohir.D09G053008 Gossypium hirsutum HOM05D006492 ORTHO05D008432 4.5e-245 852.0 998 48.1
Gorai.006G055600 Gossypium raimondii HOM05D006492 ORTHO05D008432 1.7e-244 850.1 998 47.9
Ciclev10004244m.g Citrus clementina HOM05D006492 ORTHO05D008432 6.4e-244 848.2 970 49.2
Cfa014875 Carpinus fangiana HOM05D006492 ORTHO05D008432 1.9e-243 846.7 966 48.7
TAR365G0557 Trochodendron aralioides HOM05D006492 ORTHO05D008432 2.3e-241 839.7 1000 47.9
TWI09G1643 Tripterygium wilfordii HOM05D006492 ORTHO05D008432 3.9e-241 839.0 1052 45.6
COL.COLO4_34090 Corchorus olitorius HOM05D006492 ORTHO05D008432 1.9e-240 836.6 997 46.8
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 2.4e-238 829.7 995 47.5
Actinidia25080 Actinidia chinensis HOM05D006492 ORTHO05D008432 2.0e-237 826.6 996 46.8
MD00G1101100 Malus domestica HOM05D006492 ORTHO05D008432 4.5e-237 825.5 1006 46.4
Cpa.g.sc59.86 Carica papaya HOM05D006492 ORTHO05D008432 7.6e-237 824.7 892 51.3
GSVIVG01029042001 Vitis vinifera HOM05D006492 ORTHO05D008432 8.4e-236 821.2 1011 45.8
TAR365G0379 Trochodendron aralioides HOM05D006492 ORTHO05D008432 1.2e-234 817.4 1001 47.7
Dinv38285 Davidia involucrata HOM05D006492 ORTHO05D008432 2.7e-234 816.2 942 47.9
FAN12G2087 Fragaria x ananassa HOM05D006492 ORTHO05D008432 5.1e-233 812.0 1016 45.0
Duzib212G0418 Durio zibethinus HOM05D006492 ORTHO05D008432 8.7e-233 811.2 950 48.3
Nn1g03104 Nelumbo nucifera HOM05D006492 ORTHO05D008432 1.9e-232 810.1 997 45.6
MSTRG.24638 Avicennia marina HOM05D006492 ORTHO05D008432 4.3e-232 808.9 998 44.1
FAN07G0933 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.1e-230 804.3 1017 44.9
RcHm_v2.0_Chr4g0396881 Rosa chinensis HOM05D006492 ORTHO05D008432 9.0e-230 801.2 1003 45.1
FAN22G2187 Fragaria x ananassa HOM05D006492 ORTHO05D008432 2.6e-229 799.7 1006 44.9
vmacro00516 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 3.8e-228 795.8 1008 45.1
CANSAT78G0108 Cannabis sativa HOM05D006492 ORTHO05D008432 1.8e-222 776.9 1012 44.8
Migut.N00332 Erythranthe guttata HOM05D006492 ORTHO05D008432 1.3e-220 770.8 967 44.9
Glyma.10G192800 Glycine max HOM05D006492 ORTHO05D008432 1.9e-219 766.9 1004 43.6
HanXRQChr07g0185861 Helianthus annuus HOM05D006492 ORTHO05D008432 4.2e-219 765.8 992 43.5
arahy.Tifrunner.gnm1.ann1.TP3X9S Arachis hypogaea HOM05D006492 ORTHO05D008432 5.5e-219 765.4 998 43.3
SGA_v2.0_scaffold2G00843 Striga asiatica HOM05D006492 ORTHO05D008432 3.6e-218 762.7 1000 42.1
Glyma.20G197700 Glycine max HOM05D006492 ORTHO05D008432 5.1e-217 758.8 971 44.1
CiPaw.01G204100 Carya illinoinensis HOM05D006492 ORTHO05D008432 4.3e-216 755.7 902 46.7
Hund24849 Selenicereus undatus HOM05D006492 ORTHO05D008432 1.1e-214 751.1 997 44.0
Sopen09g034300 Solanum pennellii HOM05D006492 ORTHO05D008432 1.1e-214 751.1 1019 42.8
EL10Ac3g06781 Beta vulgaris HOM05D006492 ORTHO05D008432 1.2e-213 747.7 1002 44.0
Lj5g0018955 Lotus japonicus HOM05D006492 ORTHO05D008432 1.5e-213 747.3 996 43.2
Phvul.007G134600 Phaseolus vulgaris HOM05D006492 ORTHO05D008432 1.7e-212 743.8 1006 41.8
Cc03_g07180 Coffea canephora HOM05D006492 ORTHO05D008432 5.5e-211 738.8 1011 41.5
CSS0015325 Camellia sinensis var. sinensis HOM05D006492 ORTHO05D008432 1.6e-210 737.3 883 46.8
ECA233G5226 Erigeron canadensis HOM05D006492 ORTHO05D008432 7.9e-210 734.9 999 41.5
ClCG05G003620 Citrullus lanatus HOM05D006492 ORTHO05D008432 6.7e-209 731.9 1021 42.6
Nitab4.5_0012325g0010 Nicotiana tabacum HOM05D006492 ORTHO05D008432 2.6e-208 729.9 1045 42.3
Sed0001454 Sechium edule HOM05D006492 ORTHO05D008432 5.7e-208 728.8 995 43.4
PGR142G2376 Punica granatum HOM05D006492 ORTHO05D008432 1.3e-207 727.6 998 42.0
TPR.G13408 Trifolium pratense HOM05D006492 ORTHO05D008432 1.5e-205 720.7 983 41.6
Nitab4.5_0000493g0030 Nicotiana tabacum HOM05D006492 ORTHO05D008432 3.4e-205 719.5 985 42.5
CsaV3_3G011330 Cucumis sativus L. HOM05D006492 ORTHO05D008432 6.5e-204 715.3 1019 42.2
FAN17G1964 Fragaria x ananassa HOM05D006492 ORTHO05D008432 7.2e-203 711.8 1032 41.9
Rhsim09G0049200 Rhododendron simsii HOM05D006492 ORTHO05D008432 1.6e-202 710.7 1034 41.0
Sc14g0004710 Simmondsia chinensis HOM05D006492 ORTHO05D008432 2.7e-202 709.9 997 40.7
Medtr1g090050 Medicago truncatula HOM05D006492 ORTHO05D008432 6.1e-202 708.8 981 41.7
Peaxi162Scf00047g01324 Petunia axillaris HOM05D006492 ORTHO05D008432 9.7e-200 701.4 983 41.8
ATR0787G047 Amborella trichopoda HOM05D006492 ORTHO05D008432 4.5e-197 692.6 1011 40.5
VMungo0720G0701 Vigna mungo HOM05D006492 ORTHO05D008432 7.7e-197 691.8 905 43.4
MBI10_g16832_MAGBIO Magnolia biondii HOM05D006492 ORTHO05D008432 1.9e-195 687.2 966 42.4
Aqoxy2G03837 Aquilegia oxysepala HOM05D006492 ORTHO05D008432 1.6e-194 684.1 1001 41.5
Lsat_1_v5_gn_6_62680 Lactuca sativa HOM05D006492 ORTHO05D008432 1.2e-192 677.9 961 40.7
AUR62035934 Chenopodium quinoa HOM05D006492 ORTHO05D008432 1.7e-191 674.1 1006 41.2
Lalb_Chr21g0312661 Lupinus albus HOM05D006492 ORTHO05D008432 3.1e-190 669.8 900 42.2
Lju414A5T31 Lonicera japonica HOM05D006492 ORTHO05D008432 5.9e-189 665.6 833 44.7
Eucgr.H00098 Eucalyptus grandis HOM05D006492 ORTHO05D008432 1.1e-187 661.4 902 42.8
DCAR_002278 Daucus carota HOM05D006492 ORTHO05D008432 1.8e-185 654.1 906 41.8
Ah.04g153340 Amaranthus hybridus HOM05D006492 ORTHO05D008432 4.4e-184 649.4 1005 39.5
Psat6g170280 Pisum sativum HOM05D006492 ORTHO05D008432 2.2e-183 647.1 1017 38.5
PSO017G3024 Papaver somniferum HOM05D006492 ORTHO05D008432 4.8e-183 646.0 1047 39.6
PSO063G2396 Papaver somniferum HOM05D006492 ORTHO05D008432 4.8e-183 646.0 1047 40.2
CAN.G1552.5 Capsicum annuum HOM05D006492 ORTHO05D008432 4.1e-182 642.9 886 42.2
SalBow3G2597 Salvia bowleyana HOM05D006492 ORTHO05D008432 2.7e-181 640.2 933 39.9
Ca_10406_v3 Cicer arietinum L. HOM05D006492 ORTHO05D008432 5.2e-177 625.9 927 40.6
Oeu051651.1 Olea europaea HOM05D006492 ORTHO05D008432 6.6e-172 609.0 771 43.3
unitig_899.g15531 Utricularia gibba HOM05D006492 ORTHO05D008432 7.3e-171 605.5 993 37.8
FvH4_4g05680 Fragaria vesca HOM05D006492 ORTHO05D008432 2.1e-162 577.4 711 44.9
Atru.chr4.1802 Acer truncatum HOM05D006492 ORTHO05D008432 2.4e-158 563.9 658 47.3
MELO3C006341.2 Cucumis melo HOM05D006492 ORTHO05D008432 1.6e-157 561.2 810 40.7
CDE04G0311 Ceratophyllum demersum HOM05D006492 ORTHO05D008432 1.3e-156 558.1 829 38.7
Zm00001eb003580 Zea mays HOM05D006492 ORTHO05D008432 8.1e-154 548.9 1008 34.0
Solyc09g091370.4 Solanum lycopersicum HOM05D006492 ORTHO05D008432 5.2e-145 519.6 676 43.0
SHI00019 Sapria himalayana HOM05D006492 ORTHO05D000009 9.9e-144 515.4 887 37.4
Os03g0144000 Oryza sativa ssp. japonica HOM05D006492 ORTHO05D008432 2.1e-138 497.7 1034 33.9
SEGI_21616 Sequoiadendron giganteum HOM05D006492 ORTHO05D008432 2.4e-129 467.6 920 34.8
vmacro22821 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 6.9e-129 466.1 934 35.3
Pp3c16_18660 Physcomitrium patens HOM05D006492 ORTHO05D008432 9.8e-67 259.6 1024 25.6
HPP92_025559 Vanilla planifolia HOM05D006492 ORTHO05D008432 2.4e-49 201.8 571 29.4
C05p02850 Brassica napus HOM05D006492 ORTHO05D008432 1.6e-48 199.1 136 77.2
HPP92_025560 Vanilla planifolia HOM05D006492 ORTHO05D008432 1.9e-46 192.2 321 39.9
Atru.chr4.1801 Acer truncatum HOM05D006492 ORTHO05D008432 2.6e-43 181.8 179 53.6
arahy.Tifrunner.gnm1.ann1.LCJ3P1 Arachis hypogaea HOM05D006492 ORTHO05D008432 2.4e-41 175.3 270 37.8
SMO117G0361 Selaginella moellendorffii HOM05D006492 ORTHO05D008432 1.2e-40 172.9 751 24.6
C05p02840 Brassica napus HOM05D006492 ORTHO05D008432 3.6e-37 161.4 119 68.9
Mapoly0061s0085 Marchantia polymorpha HOM05D006492 ORTHO05D008432 1.3e-31 142.9 649 24.3
Lju414A5G29 Lonicera japonica HOM05D006492 ORTHO05D008432 1.6e-24 119.4 144 48.6
BcaC07g36900 Brassica carinata HOM05D006492 ORTHO05D008432 1.1e-22 113.2 89 70.8
AagrBONN_evm.TU.Sc2ySwM_117.2272 Anthoceros agrestis HOM05D006492 ORTHO05D008432 8.7e-15 87.0 646 20.9
A08p36810 Brassica napus HOM05D000256 ORTHO05D000119 1.1e-14 86.7 57 80.7
BraA08t35582Z Brassica rapa HOM05D000256 ORTHO05D000119 1.1e-14 86.7 57 80.7
CBR_g61877 Chara braunii HOM05D006492 ORTHO05D008432 4.8e-13 81.3 870 21.4
BcaB02g07770 Brassica carinata HOM05D004445 ORTHO05D005578 6.0e-08 64.3 46 73.9


User provided reference genes

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