Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 1.1e-210 736.5 388 100.0
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 2.6e-172 609.0 380 86.3
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 6.5e-152 541.2 383 77.5
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 2.2e-139 499.6 389 73.8
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 1.6e-137 493.4 387 73.6
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 8.9e-117 424.5 389 66.8
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 4.4e-116 422.2 383 66.1
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 2.8e-110 402.9 366 65.6
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 1.1e-109 401.0 366 65.3
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 7.1e-106 388.3 391 62.7
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 2.0e-100 370.2 380 59.5
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 2.7e-97 359.8 382 55.2
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 6.0e-81 305.4 376 52.7
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 2.7e-49 200.3 125 86.4
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 2.0e-28 131.0 431 32.9
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 1.0e-24 118.6 435 29.2
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 2.3e-24 117.5 423 30.3
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 2.3e-24 117.5 417 30.9
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 6.8e-24 115.9 264 35.6
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 8.9e-24 115.5 419 29.4
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 4.4e-23 113.2 382 31.4
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 5.7e-23 112.8 425 29.4
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 2.4e-21 107.5 422 28.7
Carub.0033s0003 Capsella rubella HOM05D003036 ORTHO05D008712 3.9e-19 100.1 79 73.4
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 6.6e-19 99.4 304 31.6
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 1.1e-18 98.6 376 29.3
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 1.1e-18 98.6 429 29.1
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 1.9e-18 97.8 258 32.6
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 1.2e-17 95.1 423 29.3
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 8.0e-17 92.4 410 27.6
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 4.4e-15 86.7 423 28.6
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 4.4e-15 86.7 421 28.7
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 9.8e-15 85.5 270 30.4
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 2.2e-14 84.3 421 26.6
BcaB06g26239 Brassica carinata HOM05D007164 ORTHO05D008802 6.4e-14 82.8 62 71.0
BcaB06g26240 Brassica carinata HOM05D007164 ORTHO05D008802 4.1e-13 80.1 95 53.7
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 6.0e-12 76.3 296 29.1
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 7.8e-12 75.9 323 29.4
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 7.8e-12 75.9 430 26.0
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 3.9e-11 73.6 321 25.5
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 6.6e-11 72.8 399 26.1
AT1G02965 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 8.6e-11 72.4 83 49.4
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 8.6e-11 72.4 138 39.9
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 1.9e-10 71.2 389 27.8
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 1.9e-10 71.2 337 25.2
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 4.3e-10 70.1 422 25.8
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 7.3e-10 69.3 383 28.2
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 9.5e-10 68.9 415 25.8
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.2e-09 68.6 426 26.1
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 4.7e-09 66.6 242 31.4
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 4.7e-09 66.6 425 25.6
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 4.7e-09 66.6 412 27.2
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 1.2e-07 62.0 404 24.8
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 1.2e-07 62.0 390 27.4
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 9.8e-07 58.9 376 26.9
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 2.9e-06 57.4 259 28.2
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 3.7e-06 57.0 392 25.3
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 4.9e-06 56.6 407 25.1
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 6.4e-06 56.2 396 26.0


User provided reference genes

Program Settings