Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 2.2e-133 479.2 280 100.0
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 3.6e-128 461.8 280 97.9
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 2.1e-123 446.0 280 88.6
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 8.1e-120 434.1 280 88.6
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 1.3e-117 426.8 280 92.1
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 9.3e-116 420.6 280 91.8
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 2.3e-114 416.0 280 89.3
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 2.3e-114 416.0 280 89.3
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 8.7e-114 414.1 280 88.9
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 5.6e-113 411.4 280 88.9
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 5.6e-113 411.4 281 89.0
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 3.0e-106 389.0 282 77.3
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 2.0e-94 349.7 281 70.5
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 1.0e-93 347.4 252 76.2
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 2.9e-93 345.9 276 72.1
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 8.5e-93 344.4 280 70.4
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 1.1e-92 344.0 276 71.7
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.4e-92 343.6 280 70.7
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 2.5e-92 342.8 280 75.7
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 3.2e-92 342.4 280 70.0
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 3.6e-91 339.0 312 64.4
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 6.1e-91 338.2 276 71.4
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 1.5e-89 333.6 281 68.7
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 2.5e-89 332.8 286 66.4
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 5.7e-89 331.6 288 73.6
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 1.3e-88 330.5 252 75.0
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 1.7e-88 330.1 277 68.6
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 2.2e-88 329.7 252 74.6
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 3.7e-88 328.9 292 72.3
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 3.7e-88 328.9 285 67.0
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 1.1e-87 327.4 277 69.0
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 1.4e-87 327.0 286 72.0
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 2.4e-87 326.2 285 67.0
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 2.4e-87 326.2 279 69.5
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 3.1e-87 325.9 293 67.2
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 3.1e-87 325.9 293 67.2
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 5.3e-87 325.1 300 64.3
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 9.1e-87 324.3 282 68.4
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 9.1e-87 324.3 289 71.3
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.5e-86 323.6 283 68.6
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 2.0e-86 323.2 274 66.8
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 3.4e-86 322.4 295 69.8
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 3.4e-86 322.4 252 74.2
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 4.5e-86 322.0 251 72.5
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 5.9e-86 321.6 277 71.8
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 7.7e-86 321.2 284 70.1
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 7.7e-86 321.2 287 72.8
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 1.0e-85 320.9 285 67.0
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 1.3e-85 320.5 283 71.7
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 1.7e-85 320.1 252 73.8
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 1.7e-85 320.1 295 68.8
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 2.9e-85 319.3 285 63.9
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 5.0e-85 318.5 249 72.7
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 5.0e-85 318.5 287 66.6
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 6.5e-85 318.2 252 73.4
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.4e-84 317.0 278 65.5
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 2.5e-84 316.2 276 67.0
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 4.2e-84 315.5 247 70.0
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 4.7e-83 312.0 270 66.3
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 1.4e-82 310.5 247 70.0
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 1.4e-82 310.5 247 70.0
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 2.3e-82 309.7 254 67.7
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 1.1e-81 307.4 300 60.7
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.1e-81 307.4 293 61.1
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 2.0e-81 306.6 306 60.8
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 2.0e-81 306.6 315 59.4
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 2.6e-81 306.2 315 61.9
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 7.4e-81 304.7 305 59.7
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 9.7e-81 304.3 276 64.5
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 4.8e-80 302.0 290 59.0
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 8.2e-80 301.2 265 64.2
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 1.4e-79 300.4 306 60.1
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 3.1e-79 299.3 246 65.0
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 4.1e-79 298.9 331 61.3
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 1.7e-77 293.5 298 61.7
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 3.8e-77 292.4 213 73.2
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.7e-75 286.2 276 62.3
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 4.7e-75 285.4 205 75.6
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 5.2e-74 282.0 277 61.4
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 8.8e-74 281.2 291 60.1
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.0e-73 280.0 251 64.5
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 2.6e-73 279.6 251 64.1
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.6e-73 279.6 251 64.1
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.7e-72 276.9 276 59.1
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 8.2e-72 274.6 280 60.4
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.4e-71 273.9 250 64.4
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.1e-71 272.3 255 63.1
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.1e-71 272.3 255 63.1
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 7.7e-70 268.1 289 56.1
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 1.0e-69 267.7 286 61.5
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 1.7e-69 266.9 280 57.1
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.0e-69 265.4 280 58.2
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 1.1e-68 264.2 251 63.7
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 5.5e-68 261.9 186 75.3
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 7.2e-68 261.5 312 53.2
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 5.7e-65 251.9 248 62.1
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 9.8e-65 251.1 258 57.4
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 9.1e-63 244.6 179 73.2
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 3.2e-60 236.1 179 72.6
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 2.1e-59 233.4 249 58.6
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 6.1e-59 231.9 401 41.9
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 1.7e-53 213.8 262 52.3
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 3.3e-52 209.5 188 61.7
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.1e-44 184.5 139 73.4
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 6.1e-43 178.7 142 71.1
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 5.2e-42 175.6 165 60.0
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 6.4e-40 168.7 182 57.7
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 2.3e-37 160.2 134 67.2
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.1e-36 157.9 133 66.2
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 4.1e-31 139.4 163 52.8
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 3.9e-29 132.9 138 58.0
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 1.2e-27 127.9 77 83.1
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.7e-24 117.5 113 61.1
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.2e-17 94.7 101 58.4
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 8.4e-16 88.6 74 75.7
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 8.4e-16 88.6 124 45.2
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 2.7e-14 83.6 106 49.1
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 5.1e-13 79.3 110 45.5
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 2.2e-08 63.9 42 71.4
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 2.4e-07 60.5 98 44.9


User provided reference genes

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