Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G02210 Arabidopsis thaliana HOM05D033228 ORTHO05D031436 6.4e-47 190.3 88 100.0
AL1G11550 Arabidopsis lyrata HOM05D033228 ORTHO05D031436 5.5e-22 107.5 61 82.0
CARHR000940 Cardamine hirsuta HOM05D033228 ORTHO05D031436 1.8e-20 102.4 67 71.6
Sp1g01310 Schrenkiella parvula HOM05D000010 ORTHO05D010675 8.8e-12 73.6 85 50.6
AT1G02230 Arabidopsis thaliana HOM05D000010 ORTHO05D010675 3.3e-11 71.6 85 48.2
AL1G11570 Arabidopsis lyrata HOM05D000010 ORTHO05D010675 5.7e-11 70.9 85 49.4
AT1G02250 Arabidopsis thaliana HOM05D000010 ORTHO05D010675 5.7e-11 70.9 85 47.1
Sp1g01320 Schrenkiella parvula HOM05D000010 ORTHO05D010675 5.7e-11 70.9 92 43.5
BraA10t42377Z Brassica rapa HOM05D000010 ORTHO05D010675 1.8e-09 65.9 85 45.9
BcaC07g42377 Brassica carinata HOM05D000010 ORTHO05D010675 4.1e-09 64.7 83 49.4
C08p53410 Brassica napus HOM05D000010 ORTHO05D010675 4.1e-09 64.7 83 49.4
BolC8t52856H Brassica oleracea HOM05D000010 ORTHO05D010675 4.1e-09 64.7 83 49.4
BcaB03g13549 Brassica carinata HOM05D000010 ORTHO05D010675 6.9e-09 63.9 91 41.8
A09p68850 Brassica napus HOM05D000010 ORTHO05D010675 6.9e-09 63.9 82 46.3
BraA09t42225Z Brassica rapa HOM05D000010 ORTHO05D010675 6.9e-09 63.9 82 46.3
Aa31sc88G10 Aethionema arabicum HOM05D000010 ORTHO05D011293 1.2e-08 63.2 88 39.8
C05p01040 Brassica napus HOM05D000010 ORTHO05D010675 1.2e-08 63.2 85 43.5
BolC5t28885H Brassica oleracea HOM05D000010 ORTHO05D010675 1.2e-08 63.2 85 43.5
Aa31LG1G10330 Aethionema arabicum HOM05D000010 ORTHO05D011293 1.5e-08 62.8 88 40.9
BcaC04g24089 Brassica carinata HOM05D000010 ORTHO05D010977 1.5e-08 62.8 82 45.1
A10p01010 Brassica napus HOM05D000010 ORTHO05D010675 2.6e-08 62.0 85 43.5
C05p01000 Brassica napus HOM05D000010 ORTHO05D010675 2.6e-08 62.0 91 41.8
BolC5t28882H Brassica oleracea HOM05D000010 ORTHO05D010675 2.6e-08 62.0 91 41.8
A10p00930 Brassica napus HOM05D000010 ORTHO05D010675 3.4e-08 61.6 88 43.2
Sabra14G0056000 Salix brachista HOM05D000010 ORTHO05D010539 3.4e-08 61.6 86 44.2
BcaB03g13548 Brassica carinata HOM05D000010 ORTHO05D010675 4.5e-08 61.2 81 48.1
BcaC05g24598 Brassica carinata HOM05D000010 ORTHO05D011293 4.5e-08 61.2 85 43.5
BcaC05g24600 Brassica carinata HOM05D000010 ORTHO05D010675 4.5e-08 61.2 91 42.9
BcaC07g42378 Brassica carinata HOM05D000010 ORTHO05D010675 4.5e-08 61.2 82 45.1
C05p00970 Brassica napus HOM05D000010 ORTHO05D011293 4.5e-08 61.2 85 43.5
C08p53400 Brassica napus HOM05D000010 ORTHO05D010675 4.5e-08 61.2 82 45.1
BolC8t52855H Brassica oleracea HOM05D000010 ORTHO05D010675 4.5e-08 61.2 82 45.1
BraA10t42379Z Brassica rapa HOM05D000010 ORTHO05D010675 4.5e-08 61.2 85 42.4
AL1G11580 Arabidopsis lyrata HOM05D000010 ORTHO05D010675 5.9e-08 60.8 91 41.8
AT3G04420 Arabidopsis thaliana HOM05D000010 ORTHO05D010675 5.9e-08 60.8 73 46.6
BraA10t42376Z Brassica rapa HOM05D000010 ORTHO05D010675 7.7e-08 60.5 78 47.4
CARHR001520 Cardamine hirsuta HOM05D000010 ORTHO05D010675 7.7e-08 60.5 85 48.2
BcaC05g24601 Brassica carinata HOM05D000010 ORTHO05D010675 1.3e-07 59.7 83 44.6
BcaC05g24603 Brassica carinata HOM05D000010 ORTHO05D010675 1.3e-07 59.7 79 46.8
BcaC04g24087 Brassica carinata HOM05D000010 ORTHO05D010977 1.7e-07 59.3 85 38.8
BolC9t53053H Brassica oleracea HOM05D000010 ORTHO05D010977 1.7e-07 59.3 85 38.8
BraA09t35782Z Brassica rapa HOM05D000010 ORTHO05D010977 1.7e-07 59.3 85 40.0
BcaB03g13547 Brassica carinata HOM05D000010 ORTHO05D010675 2.9e-07 58.5 86 43.0
Carub.0001s0124 Capsella rubella HOM05D000010 ORTHO05D010675 2.9e-07 58.5 73 45.2
Aa31LG1G10380 Aethionema arabicum HOM05D000010 ORTHO05D011293 3.8e-07 58.2 80 43.8
BcaC05g24593 Brassica carinata HOM05D000010 ORTHO05D011293 3.8e-07 58.2 85 40.0
C05p00930 Brassica napus HOM05D000010 ORTHO05D011293 3.8e-07 58.2 85 40.0
BolC5t28878H Brassica oleracea HOM05D000010 ORTHO05D011293 3.8e-07 58.2 85 40.0
Carub.0006s3565 Capsella rubella HOM05D000010 ORTHO05D010977 3.8e-07 58.2 84 41.7
AL1G11560 Arabidopsis lyrata HOM05D000010 ORTHO05D010675 5.0e-07 57.8 73 45.2
BcaC03g16096 Brassica carinata HOM05D000010 ORTHO05D010977 5.0e-07 57.8 92 41.3
A09p01080 Brassica napus HOM05D000010 ORTHO05D010977 5.0e-07 57.8 85 40.0
BolC2t09883H Brassica oleracea HOM05D000010 ORTHO05D010977 5.0e-07 57.8 92 41.3
BraA02t07438Z Brassica rapa HOM05D000010 ORTHO05D010977 5.0e-07 57.8 92 41.3
CARHR001530 Cardamine hirsuta HOM05D000010 ORTHO05D010675 6.5e-07 57.4 63 52.4
THA.LOC104825913 Tarenaya hassleriana HOM05D000010 ORTHO05D011293 6.5e-07 57.4 89 39.3
A10p00960 Brassica napus HOM05D000010 ORTHO05D010675 1.1e-06 56.6 61 52.5
C09p01190 Brassica napus HOM05D000010 ORTHO05D010977 1.1e-06 56.6 85 40.0
BolC9t53052H Brassica oleracea HOM05D000010 ORTHO05D010977 1.1e-06 56.6 85 40.0
QL08p048082 Quercus lobata HOM05D000010 ORTHO05D016909 1.1e-06 56.6 82 41.5
BcaB01g02138 Brassica carinata HOM05D000010 ORTHO05D010977 1.4e-06 56.2 85 37.6
TWI59G1459 Tripterygium wilfordii HOM05D000010 ORTHO05D413636 1.4e-06 56.2 86 38.4
BcaC04g24088 Brassica carinata HOM05D000010 ORTHO05D010977 1.9e-06 55.8 85 38.8
BcaC05g24605 Brassica carinata HOM05D000010 ORTHO05D010675 2.5e-06 55.5 85 44.7
C05p01020 Brassica napus HOM05D000010 ORTHO05D010675 2.5e-06 55.5 61 52.5
BolC5t28883H Brassica oleracea HOM05D000010 ORTHO05D010675 2.5e-06 55.5 85 44.7
BraA10t42378Z Brassica rapa HOM05D000010 ORTHO05D010675 2.5e-06 55.5 85 45.9
QL02p055032 Quercus lobata HOM05D000010 ORTHO05D016909 2.5e-06 55.5 85 41.2
BcaB01g02140 Brassica carinata HOM05D000010 ORTHO05D010977 3.2e-06 55.1 85 38.8
Potri.002G154200 Populus trichocarpa HOM05D000010 ORTHO05D010539 3.2e-06 55.1 68 41.2
AL1G11530 Arabidopsis lyrata HOM05D000010 ORTHO05D011293 5.5e-06 54.3 86 38.4
CARHR250120 Cardamine hirsuta HOM05D000010 ORTHO05D010977 5.5e-06 54.3 83 41.0
Sabra02G0122300 Salix brachista HOM05D000010 ORTHO05D010539 7.2e-06 53.9 68 39.7


User provided reference genes

Program Settings