Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 9.8e-189 663.3 333 100.0
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 2.7e-178 628.6 335 94.9
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 4.0e-174 614.8 339 91.7
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 6.8e-174 614.0 338 92.3
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 1.5e-173 612.8 338 92.3
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 5.8e-173 610.9 337 92.6
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 3.2e-171 605.1 337 91.7
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 7.8e-170 600.5 341 90.9
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 2.0e-157 559.3 362 82.9
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 2.0e-157 559.3 362 82.9
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.2e-154 550.1 360 82.2
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 3.8e-148 528.5 338 78.7
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 4.9e-148 528.1 338 78.1
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.1e-147 526.9 325 79.7
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 3.2e-147 525.4 338 78.1
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 1.6e-146 523.1 324 78.4
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 3.5e-146 521.9 321 79.8
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 1.3e-145 520.0 336 76.5
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.3e-145 520.0 335 77.0
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 3.9e-145 518.5 337 77.2
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 5.1e-145 518.1 337 76.9
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 6.6e-145 517.7 324 77.5
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 6.6e-145 517.7 338 76.3
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 1.9e-144 516.2 338 75.7
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 4.3e-144 515.0 320 79.1
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 9.6e-144 513.8 336 75.3
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 2.1e-143 512.7 332 75.0
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 2.1e-143 512.7 336 75.6
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 2.8e-143 512.3 325 76.9
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 2.8e-143 512.3 319 79.3
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 3.6e-143 511.9 324 78.4
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 8.1e-143 510.8 341 74.5
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 1.8e-142 509.6 380 69.7
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 2.4e-142 509.2 323 78.0
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.4e-142 509.2 346 74.0
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 3.1e-142 508.8 338 76.0
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 5.3e-142 508.1 318 79.6
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 5.3e-142 508.1 322 77.6
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 6.9e-142 507.7 340 75.6
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 1.2e-141 506.9 321 75.4
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 1.2e-141 506.9 327 75.5
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.5e-141 506.5 379 69.7
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 2.6e-141 505.8 317 77.9
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.5e-141 505.0 346 73.7
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 4.5e-141 505.0 318 77.0
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 7.6e-141 504.2 283 90.1
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 9.9e-141 503.8 322 76.7
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.7e-140 503.1 346 73.4
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 2.2e-140 502.7 321 77.3
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 1.4e-139 500.0 321 76.9
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 2.4e-139 499.2 321 74.5
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 1.2e-138 496.9 321 77.6
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 1.6e-138 496.5 324 76.2
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 2.1e-138 496.1 317 75.7
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 4.6e-138 495.0 324 74.7
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 6.0e-138 494.6 328 74.1
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 6.0e-138 494.6 322 75.5
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 7.9e-138 494.2 324 74.7
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 1.8e-137 493.0 324 75.6
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 2.3e-137 492.7 317 75.4
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 2.3e-137 492.7 322 75.8
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 3.0e-137 492.3 336 72.6
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 5.1e-137 491.5 337 72.4
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 5.1e-137 491.5 319 75.5
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.1e-136 490.3 336 71.7
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.1e-136 490.3 369 68.8
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.5e-136 490.0 336 71.7
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.9e-136 489.6 316 76.9
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.1e-135 486.1 315 74.9
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 2.1e-135 486.1 317 74.1
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 2.8e-135 485.7 334 73.1
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 6.2e-135 484.6 324 73.5
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 9.0e-134 480.7 332 73.5
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 1.5e-133 479.9 301 78.7
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 5.8e-133 478.0 337 70.9
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 1.9e-131 473.0 309 75.7
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 2.1e-130 469.5 328 72.3
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 1.8e-129 466.5 293 78.8
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 2.3e-129 466.1 312 72.1
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.6e-128 461.5 341 69.2
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 1.3e-127 460.3 326 69.9
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.7e-127 458.8 372 64.5
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.8e-126 456.4 302 74.8
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 2.0e-125 453.0 356 66.0
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 4.2e-123 445.3 296 76.0
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.3e-121 440.3 385 61.3
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 2.3e-121 439.5 285 75.8
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 2.3e-121 439.5 322 69.6
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 3.9e-121 438.7 284 77.8
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 8.7e-121 437.6 324 68.2
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 1.4e-118 430.3 316 69.9
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 4.1e-118 428.7 336 66.7
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.9e-115 419.9 279 73.8
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 3.2e-115 419.1 371 61.7
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 2.1e-114 416.4 331 66.8
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 1.8e-113 413.3 262 83.2
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.8e-113 413.3 267 74.9
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.2e-109 400.6 263 77.2
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 2.6e-109 399.4 323 61.0
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.0e-108 397.5 327 63.9
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 1.7e-108 396.7 283 70.3
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 1.9e-107 393.3 277 70.4
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 3.2e-107 392.5 299 65.6
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 5.5e-107 391.7 290 66.6
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 2.1e-106 389.8 315 59.7
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 3.7e-103 379.0 313 58.8
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.2e-101 374.0 322 62.4
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.9e-99 366.7 327 56.0
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 3.2e-99 365.9 233 79.8
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 3.1e-94 349.4 240 70.4
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 3.5e-93 345.9 280 64.3
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 1.3e-92 344.0 277 65.7
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 4.7e-90 335.5 316 53.2
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 2.3e-81 306.6 234 64.1
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.4e-80 302.8 226 67.7
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.4e-70 270.8 220 64.5
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 3.2e-70 269.6 384 40.4
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 8.1e-50 201.8 142 76.1
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 5.8e-48 195.7 327 37.3
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 2.2e-47 193.7 183 59.6
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.0e-44 184.9 143 66.4
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 1.9e-43 180.6 112 73.2
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 1.4e-41 174.5 129 69.8
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 3.8e-39 166.4 292 36.6
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.7e-29 133.7 97 68.0
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 1.3e-20 104.8 97 54.6
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 2.5e-14 84.0 39 89.7
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 1.6e-13 81.3 67 62.7
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.8e-12 77.8 52 75.0


User provided reference genes

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