Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 1.4e-73 279.6 153 100.0
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 1.2e-61 240.0 153 88.9
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 3.8e-55 218.4 154 81.2
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 6.1e-53 211.1 155 79.4
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 5.7e-51 204.5 156 76.9
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 9.8e-51 203.8 154 79.2
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 8.0e-45 184.1 158 72.8
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 8.0e-45 184.1 158 72.8
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 1.4e-44 183.3 159 71.7
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 6.8e-44 181.0 159 71.1
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 3.3e-38 162.2 157 66.2
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 1.6e-29 133.3 156 58.3
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 2.6e-27 125.9 159 52.8
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 4.4e-27 125.2 162 51.2
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 8.3e-26 120.9 155 54.2
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 1.9e-25 119.8 162 50.6
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 1.7e-23 113.2 153 49.7
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 6.6e-23 111.3 161 50.3
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 3.3e-22 109.0 184 46.2
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 4.3e-22 108.6 176 47.7
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 1.2e-21 107.1 165 43.6
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 2.1e-21 106.3 156 49.4
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 2.1e-21 106.3 172 47.1
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 2.8e-21 105.9 170 47.6
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 2.8e-21 105.9 159 47.8
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 8.1e-21 104.4 165 46.7
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 8.1e-21 104.4 154 48.7
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 1.1e-20 104.0 160 46.9
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 1.4e-20 103.6 171 45.6
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 1.8e-20 103.2 178 47.2
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.8e-20 103.2 174 46.6
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 1.8e-20 103.2 167 46.7
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 5.2e-20 101.7 154 46.8
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 2.0e-19 99.8 172 46.5
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 3.4e-19 99.0 167 46.1
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 4.4e-19 98.6 158 42.4
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 4.4e-19 98.6 171 45.6
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.4e-19 98.6 159 47.8
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 4.4e-19 98.6 180 45.0
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 5.8e-19 98.2 168 44.6
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 7.5e-19 97.8 171 45.0
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 7.5e-19 97.8 166 45.2
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 7.5e-19 97.8 175 45.1
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 7.5e-19 97.8 155 48.4
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 9.8e-19 97.4 162 48.1
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 9.8e-19 97.4 181 44.2
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.3e-18 97.1 159 47.2
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 1.7e-18 96.7 163 45.4
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 1.7e-18 96.7 161 46.6
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 2.9e-18 95.9 179 40.8
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 2.9e-18 95.9 156 46.2
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 3.7e-18 95.5 155 45.8
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 4.9e-18 95.1 167 46.1
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 6.4e-18 94.7 160 41.2
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.1e-17 94.0 159 40.9
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 2.4e-17 92.8 159 41.5
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 2.4e-17 92.8 160 45.0
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 5.4e-17 91.7 154 44.2
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 5.4e-17 91.7 181 40.9
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 5.4e-17 91.7 158 44.3
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 7.1e-17 91.3 158 46.8
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 2.1e-16 89.7 167 41.9
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 2.7e-16 89.4 163 42.3
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 6.0e-16 88.2 171 39.8
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 1.3e-15 87.0 171 39.8
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 1.7e-15 86.7 159 42.8
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 1.7e-15 86.7 170 39.4
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.3e-15 86.3 160 42.5
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 6.6e-15 84.7 160 41.9
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 4.3e-14 82.0 164 40.9
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 7.3e-14 81.3 187 38.0
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 7.3e-14 81.3 188 38.3
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 1.6e-13 80.1 161 39.8
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 2.1e-13 79.7 187 38.5
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 2.8e-13 79.3 157 39.5
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 8.1e-13 77.8 134 45.5
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 8.1e-13 77.8 162 37.7
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 4.0e-12 75.5 152 38.8
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 5.2e-12 75.1 173 38.7
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 6.8e-12 74.7 108 48.1
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 6.8e-12 74.7 139 41.7
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 2.6e-11 72.8 148 41.9
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 4.4e-11 72.0 162 36.4
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 1.4e-09 67.0 160 39.4
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 3.2e-09 65.9 162 36.4
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 5.4e-09 65.1 162 35.2
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.2e-08 63.9 147 38.8
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 3.5e-08 62.4 75 48.0
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 1.0e-07 60.8 152 36.8
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 3.3e-06 55.8 152 36.2
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 9.6e-06 54.3 151 37.7


User provided reference genes

Program Settings