Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G01715 Arabidopsis thaliana HOM05D006065 ORTHO05D007672 3.6e-68 261.5 140 100.0
AL1G10640 Arabidopsis lyrata HOM05D006065 ORTHO05D007672 1.9e-48 196.1 141 80.1
THA.LOC104817023 Tarenaya hassleriana HOM05D006065 ORTHO05D007672 2.0e-18 96.3 151 45.0
Aa31LG5G450 Aethionema arabicum HOM05D006065 ORTHO05D007672 4.5e-18 95.1 146 43.8
AT4G00525 Arabidopsis thaliana HOM05D006065 ORTHO05D007672 1.7e-17 93.2 134 47.8
A03p32140 Brassica napus HOM05D006065 ORTHO05D007672 1.1e-16 90.5 137 43.8
BcaC01g06870 Brassica carinata HOM05D006065 ORTHO05D007672 1.9e-16 89.7 137 43.8
BcaNung05355 Brassica carinata HOM05D006065 ORTHO05D007672 1.9e-16 89.7 137 43.8
BolC3t16187H Brassica oleracea HOM05D006065 ORTHO05D007672 1.9e-16 89.7 137 43.8
BraA03t12384Z Brassica rapa HOM05D006065 ORTHO05D007672 3.2e-16 89.0 137 43.8
Carub.0006s3674 Capsella rubella HOM05D006065 ORTHO05D007672 5.5e-16 88.2 128 44.5
Thhalv10029047m.g Eutrema salsugineum HOM05D006065 ORTHO05D007672 7.1e-16 87.8 152 43.4
Sp6g00560 Schrenkiella parvula HOM05D006065 ORTHO05D007672 1.6e-15 86.7 147 42.9
AL6G52950 Arabidopsis lyrata HOM05D006065 ORTHO05D007672 3.0e-14 82.4 131 43.5
Atru.chr5.461 Acer truncatum HOM05D006065 ORTHO05D007672 1.9e-13 79.7 135 36.3
Thecc.01G360200 Theobroma cacao HOM05D006065 ORTHO05D007672 2.5e-13 79.3 136 39.0
COL.COLO4_12704 Corchorus olitorius HOM05D006065 ORTHO05D007672 3.3e-13 79.0 126 39.7
CiPaw.01G060100 Carya illinoinensis HOM05D006065 ORTHO05D007672 2.8e-12 75.9 142 35.9
Cpa.g.sc18.247 Carica papaya HOM05D006065 ORTHO05D007672 1.1e-11 73.9 147 35.4
Duzib138G1923 Durio zibethinus HOM05D006065 ORTHO05D007672 1.4e-11 73.6 152 34.2
Medtr7g076690 Medicago truncatula HOM05D006065 ORTHO05D007672 3.1e-11 72.4 134 34.3
Gorai.004G158400 Gossypium raimondii HOM05D006065 ORTHO05D007672 6.9e-11 71.2 128 35.2
Gohir.A08G131000 Gossypium hirsutum HOM05D006065 ORTHO05D007672 9.0e-11 70.9 128 35.9
Dinv43807 Davidia involucrata HOM05D006065 ORTHO05D007672 2.6e-10 69.3 155 32.3
Gohir.D08G152500 Gossypium hirsutum HOM05D006065 ORTHO05D007672 2.6e-10 69.3 128 34.4
Actinidia10016 Actinidia chinensis HOM05D006065 ORTHO05D007672 3.4e-10 68.9 135 34.1
Lj1g0009386 Lotus japonicus HOM05D006065 ORTHO05D007672 5.9e-10 68.2 123 30.9
MSTRG.4858 Avicennia marina HOM05D006065 ORTHO05D007672 1.3e-09 67.0 156 33.3
QL08p049008 Quercus lobata HOM05D006065 ORTHO05D007672 1.3e-09 67.0 136 33.8
Ciclev10022632m.g Citrus clementina HOM05D006065 ORTHO05D007672 2.2e-09 66.2 131 33.6
Oeu010611.1 Olea europaea HOM05D006065 ORTHO05D007672 2.9e-09 65.9 146 33.6
VMungo1383G0981 Vigna mungo HOM05D006065 ORTHO05D007672 2.9e-09 65.9 132 31.8
Glyma.18G230000 Glycine max HOM05D006065 ORTHO05D007672 5.0e-09 65.1 129 32.6
Gorai.007G098900 Gossypium raimondii HOM05D006065 ORTHO05D007672 5.0e-09 65.1 129 33.3
Phvul.008G067900 Phaseolus vulgaris HOM05D006065 ORTHO05D007672 5.0e-09 65.1 135 30.4
Sabra14G0060500 Salix brachista HOM05D006065 ORTHO05D007672 6.5e-09 64.7 128 33.6
Cfa003936 Carpinus fangiana HOM05D006065 ORTHO05D007672 8.5e-09 64.3 141 31.2
CANSAT56G3634 Cannabis sativa HOM05D006065 ORTHO05D007672 1.1e-08 63.9 147 33.3
Potri.014G083100 Populus trichocarpa HOM05D006065 ORTHO05D007672 1.1e-08 63.9 133 34.6
Dinv32472 Davidia involucrata HOM05D006065 ORTHO05D007672 1.4e-08 63.5 135 33.3
Duzib133G1075 Durio zibethinus HOM05D006065 ORTHO05D007672 1.4e-08 63.5 127 36.2
Glyma.09G262200 Glycine max HOM05D006065 ORTHO05D007672 1.4e-08 63.5 129 31.8
Actinidia20914 Actinidia chinensis HOM05D006065 ORTHO05D007672 1.9e-08 63.2 147 29.3
Ca_07890_v3 Cicer arietinum L. HOM05D006065 ORTHO05D007672 1.9e-08 63.2 130 28.5
Hund16927 Selenicereus undatus HOM05D006065 ORTHO05D007672 1.9e-08 63.2 138 34.1
PGR031G0376 Punica granatum HOM05D006065 ORTHO05D007672 2.5e-08 62.8 138 29.7
Lsat_1_v5_gn_7_4500 Lactuca sativa HOM05D006065 ORTHO05D007672 4.2e-08 62.0 145 34.5
TWI14G0791 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 4.2e-08 62.0 131 35.1
TAR629G3005 Trochodendron aralioides HOM05D006065 ORTHO05D007672 9.3e-08 60.8 136 31.6
CARHR248680 Cardamine hirsuta HOM05D006065 ORTHO05D007672 1.6e-07 60.1 136 36.0
HanXRQChr13g0426531 Helianthus annuus HOM05D006065 ORTHO05D007672 1.6e-07 60.1 137 29.9
SalBow3G2602 Salvia bowleyana HOM05D006065 ORTHO05D007672 1.6e-07 60.1 125 33.6
Peaxi162Scf00020g00240 Petunia axillaris HOM05D006065 ORTHO05D007672 2.1e-07 59.7 120 33.3
MSTRG.28221 Avicennia marina HOM05D006065 ORTHO05D007672 2.7e-07 59.3 150 34.7
MBI18_g21561_MAGBIO Magnolia biondii HOM05D006065 ORTHO05D007672 2.7e-07 59.3 137 30.7
Manes.05G035300 Manihot esculenta HOM05D006065 ORTHO05D007672 3.6e-07 58.9 135 30.4
TWI59G0879 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 3.6e-07 58.9 132 32.6
Migut.N01441 Erythranthe guttata HOM05D006065 ORTHO05D007672 4.6e-07 58.5 157 28.7
Sed0025321 Sechium edule HOM05D006065 ORTHO05D007672 6.1e-07 58.2 137 31.4
arahy.Tifrunner.gnm1.ann1.QD83TI Arachis hypogaea HOM05D006065 ORTHO05D007672 7.9e-07 57.8 136 29.4
SGA_v2.0_scaffold11G05664 Striga asiatica HOM05D006065 ORTHO05D007672 1.0e-06 57.4 148 33.1
arahy.Tifrunner.gnm1.ann1.WJC6IK Arachis hypogaea HOM05D006065 ORTHO05D007672 1.8e-06 56.6 171 25.7
DCAR_006926 Daucus carota HOM05D006065 ORTHO05D007672 1.8e-06 56.6 141 30.5
FAN10G0270 Fragaria x ananassa HOM05D006065 ORTHO05D007672 1.8e-06 56.6 127 33.9
ClCG05G001580 Citrullus lanatus HOM05D006065 ORTHO05D007672 2.3e-06 56.2 136 28.7
Sopen01g038320 Solanum pennellii HOM05D006065 ORTHO05D007672 2.3e-06 56.2 148 31.1
unitig_8.g3395 Utricularia gibba HOM05D006065 ORTHO05D007672 2.3e-06 56.2 136 30.1
Sabra02G0126300 Salix brachista HOM05D006065 ORTHO05D007672 5.1e-06 55.1 127 32.3
HPP92_008504 Vanilla planifolia HOM05D006065 ORTHO05D007672 5.1e-06 55.1 123 28.5
TAR374G1295 Trochodendron aralioides HOM05D006065 ORTHO05D007672 6.7e-06 54.7 154 28.6
GSVIVG01018349001 Vitis vinifera HOM05D006065 ORTHO05D007672 6.7e-06 54.7 116 30.2
PGSC0003DMG400000036 Solanum tuberosum HOM05D006065 ORTHO05D007672 8.7e-06 54.3 151 30.5


User provided reference genes

Program Settings