Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1885.9 949 100.0
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1825.4 949 96.2
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 1760.7 968 91.7
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 1758.0 968 90.5
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1757.3 956 92.9
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1755.0 956 92.4
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1700.3 958 89.5
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1694.9 956 89.3
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1688.7 957 89.0
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1686.8 958 88.5
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1617.4 954 85.3
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1598.9 945 84.9
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1441.4 944 75.4
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1441.0 951 75.4
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1439.9 942 76.3
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1439.5 941 75.3
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1429.1 943 74.1
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1427.2 942 74.6
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1427.2 942 75.3
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1426.0 951 73.3
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1423.7 944 75.3
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1422.1 940 75.2
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1412.9 949 73.3
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1405.2 946 72.7
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1404.8 950 73.6
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1403.3 974 72.3
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1402.9 951 72.3
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 1400.2 938 74.5
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1400.2 950 73.5
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1399.4 941 74.6
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1397.9 944 74.0
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1395.6 961 74.0
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1381.7 942 73.0
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1379.4 945 71.9
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1377.5 945 72.0
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1377.1 949 73.7
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1375.1 942 73.0
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1374.0 944 71.7
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1373.6 942 71.3
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1373.6 950 71.7
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1372.8 945 71.6
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1371.3 966 70.0
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1371.3 945 71.6
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1370.5 951 71.4
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1367.4 944 72.4
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1366.3 951 71.2
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1362.8 945 70.7
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1362.4 944 73.7
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1361.7 943 72.3
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1360.9 946 71.2
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1360.1 940 71.0
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1359.0 945 70.4
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1358.6 941 71.1
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1357.8 950 71.4
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1357.4 944 72.0
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1355.9 945 72.1
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1349.0 946 71.1
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1345.9 946 70.8
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1345.5 940 72.0
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1344.3 942 71.3
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1342.8 946 70.6
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1342.4 942 71.4
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1339.7 940 70.9
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1337.8 942 69.4
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1333.5 945 69.9
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1332.8 942 71.1
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1331.2 936 69.0
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1331.2 946 69.6
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1330.5 932 72.9
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1323.1 942 71.0
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 0.0e+00 1322.8 940 69.9
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1320.8 974 68.0
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 1317.4 942 70.2
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1312.4 939 70.5
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1310.0 941 70.4
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1305.8 936 71.0
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 0.0e+00 1290.8 943 70.0
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1286.9 934 70.0
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1284.6 923 70.3
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1277.3 934 69.8
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1273.1 917 70.0
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1272.3 940 69.1
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1270.8 938 68.4
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1262.7 941 69.0
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 0.0e+00 1235.7 932 67.2
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 0.0e+00 1224.5 991 64.0
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 0.0e+00 1219.1 947 67.2
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 0.0e+00 1217.2 946 64.5
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 0.0e+00 1216.1 940 64.1
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 0.0e+00 1196.8 939 63.2
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1150.2 756 74.7
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 0.0e+00 1116.7 753 73.6
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 0.0e+00 1108.2 1055 56.3
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 2.3e-307 1058.9 941 57.4
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 1.5e-298 1029.6 754 69.5
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 2.8e-297 1025.4 718 72.6
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 3.3e-290 1001.9 835 63.6
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 1.7e-286 989.6 537 93.1
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 4.6e-284 981.5 756 68.3
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 2.5e-253 879.4 947 49.4
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 3.5e-247 859.0 936 54.4
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 1.7e-241 840.1 938 48.2
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 6.5e-238 828.2 779 58.2
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 4.9e-225 785.4 949 46.0
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 8.1e-196 688.3 390 87.2
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 6.9e-195 685.3 485 70.7
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 2.1e-188 663.7 652 55.7
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 4.8e-180 636.0 1271 35.2
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 8.5e-161 572.0 395 72.9
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 1.1e-88 332.4 216 73.6
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 1.8e-78 298.5 191 75.9
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 3.2e-51 208.0 163 65.0
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 3.7e-23 114.8 59 83.1
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 2.1e-18 99.0 54 79.6
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 1.0e-12 80.1 65 55.4
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 2.5e-11 75.5 54 59.3
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 2.5e-11 75.5 54 59.3
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 2.7e-10 72.0 216 26.9
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 3.4e-08 65.1 40 70.0
TPR.G10878 Trifolium pratense HOM05D020190 ORTHO05D018030 9.8e-08 63.5 73 45.2
SEGI_36326 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.7e-07 62.8 90 37.8
TPR.G39590 Trifolium pratense HOM05D020190 ORTHO05D018030 2.2e-07 62.4 73 43.8


User provided reference genes

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