Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL9U11140 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 6.2e-38 160.2 77 100.0
AT4G13075 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.7e-33 144.8 77 89.6
Carub.0007s2967 Capsella rubella HOM05D008462 ORTHO05D010511 1.2e-20 102.8 62 75.8
Thhalv10026849m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 1.2e-20 102.8 72 65.3
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 9.7e-15 83.2 75 52.0
AT3G25170 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 3.1e-13 78.2 74 51.4
Sp3g22770 Schrenkiella parvula HOM05D008462 ORTHO05D010511 2.6e-12 75.1 74 48.6
AL3G52880 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 7.7e-12 73.6 75 49.3
AL3G40860 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 2.2e-11 72.0 74 47.3
Aa31sc95G170 Aethionema arabicum HOM05D008462 ORTHO05D010511 2.9e-11 71.6 77 46.8
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.4e-10 69.3 74 45.9
AT2G19045 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.9e-10 68.9 74 45.9
AT2G19030 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 5.5e-10 67.4 74 44.6
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 7.2e-10 67.0 74 45.9
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 9.4e-10 66.6 74 45.9
Sp3g32450 Schrenkiella parvula HOM05D008462 ORTHO05D010511 2.1e-09 65.5 74 44.6
AT2G19040 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 4.6e-09 64.3 74 44.6
AT2G19020 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 6.1e-09 63.9 74 47.3
Eucgr.L02597 Eucalyptus grandis HOM05D009215 ORTHO05D010511 1.8e-08 62.4 72 43.1
A07p07140 Brassica napus HOM05D008462 ORTHO05D010511 2.3e-08 62.0 77 44.2
BraA07t28500Z Brassica rapa HOM05D008462 ORTHO05D010511 2.3e-08 62.0 77 44.2
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 3.0e-08 61.6 74 41.9
Prupe.8G194500 Prunus persica HOM05D009215 ORTHO05D010851 5.1e-08 60.8 73 39.7
Prupe.8G194800 Prunus persica HOM05D009215 ORTHO05D010851 5.1e-08 60.8 73 39.7
AL3G40850 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 6.7e-08 60.5 75 46.7
CARHR109540 Cardamine hirsuta HOM05D008462 ORTHO05D010511 1.5e-07 59.3 75 40.0
BcaC06g30601 Brassica carinata HOM05D008462 ORTHO05D010511 4.4e-07 57.8 74 44.6
BcaB03g16703 Brassica carinata HOM05D000065 ORTHO05D000162 5.7e-07 57.4 47 46.8
CARHR101510 Cardamine hirsuta HOM05D008462 ORTHO05D010511 5.7e-07 57.4 74 43.2
A01p40150 Brassica napus HOM05D023045 ORTHO05D024329 7.4e-07 57.0 74 40.5
BraA01t04055Z Brassica rapa HOM05D023045 ORTHO05D024329 7.4e-07 57.0 74 40.5
BcaC06g35797 Brassica carinata HOM05D008462 ORTHO05D010511 9.7e-07 56.6 77 41.6
C07p10750 Brassica napus HOM05D008462 ORTHO05D010511 9.7e-07 56.6 77 41.6
BolC7t41541H Brassica oleracea HOM05D008462 ORTHO05D010511 9.7e-07 56.6 77 41.6
Eucgr.L02596 Eucalyptus grandis HOM05D008462 ORTHO05D010511 9.7e-07 56.6 74 40.5
Cpa.g.sc8.111 Carica papaya HOM05D018895 ORTHO05D010851 2.2e-06 55.5 65 43.1
Eucgr.E01762 Eucalyptus grandis HOM05D009215 ORTHO05D010511 2.2e-06 55.5 72 38.9
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 2.8e-06 55.1 75 41.3
Prupe.8G194700 Prunus persica HOM05D009215 ORTHO05D010851 3.7e-06 54.7 76 36.8
Cpa.g.sc8.114 Carica papaya HOM05D018895 ORTHO05D010851 6.3e-06 53.9 65 41.5
Eucgr.E01763 Eucalyptus grandis HOM05D008462 ORTHO05D010511 8.2e-06 53.5 72 37.5
Sp3g22760 Schrenkiella parvula HOM05D008462 ORTHO05D010511 8.2e-06 53.5 47 53.2


User provided reference genes

Program Settings