Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL9U10800 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 3.8e-45 184.5 96 100.0
AL6G36070 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 2.1e-43 178.7 95 96.8
AL8G44460 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 3.9e-37 157.9 84 97.6
AL1G54420 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 7.3e-36 153.7 79 97.5
CARHR180790 Cardamine hirsuta HOM05D007592 ORTHO05D004645 2.3e-21 105.5 80 67.5
CARHR184030 Cardamine hirsuta HOM05D007592 ORTHO05D004645 3.9e-21 104.8 79 67.1
Atru.chr10.1040 Acer truncatum HOM05D007592 ORTHO05D004645 7.6e-17 90.5 103 50.5
Atru.chr8.1335 Acer truncatum HOM05D007592 ORTHO05D004645 2.2e-16 89.0 103 47.6
Atru.chr13.1766 Acer truncatum HOM05D007592 ORTHO05D004645 2.1e-14 82.4 92 51.1
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 2.7e-14 82.0 103 48.5
Oeu029633.1 Olea europaea HOM05D007592 ORTHO05D004645 2.7e-14 82.0 98 48.0
Ciclev10016612m.g Citrus clementina HOM05D007592 ORTHO05D004645 3.5e-14 81.6 103 46.6
Ciclev10033648m.g Citrus clementina HOM05D007592 ORTHO05D004645 3.5e-14 81.6 103 47.6
AT4G10230 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 7.8e-14 80.5 101 46.5
Ciclev10027215m.g Citrus clementina HOM05D007592 ORTHO05D004645 7.8e-14 80.5 104 46.2
DCAR_001490 Daucus carota HOM05D007592 ORTHO05D004645 7.8e-14 80.5 103 48.5
AT1G24380 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 2.3e-13 79.0 102 45.1
Ciclev10023655m.g Citrus clementina HOM05D007592 ORTHO05D004645 3.0e-13 78.6 82 51.2
Manes.13G090650 Manihot esculenta HOM05D007592 ORTHO05D004645 8.6e-13 77.0 96 45.8
BraA09t38299Z Brassica rapa HOM05D007592 ORTHO05D004645 1.1e-12 76.6 104 44.2
C06p21250 Brassica napus HOM05D007592 ORTHO05D004645 1.5e-12 76.3 104 43.3
Atru.chr6.1370 Acer truncatum HOM05D007592 ORTHO05D004645 3.3e-12 75.1 92 47.8
BolC6t37310H Brassica oleracea HOM05D007592 ORTHO05D004645 4.3e-12 74.7 103 42.7
Atru.chr3.1639 Acer truncatum HOM05D007592 ORTHO05D004645 9.6e-12 73.6 92 46.7
C04p29390 Brassica napus HOM05D007592 ORTHO05D004645 9.6e-12 73.6 99 45.5
CARHR029530 Cardamine hirsuta HOM05D007592 ORTHO05D004645 9.6e-12 73.6 105 41.9
Ciclev10023446m.g Citrus clementina HOM05D007592 ORTHO05D004645 3.6e-11 71.6 103 43.7
Atru.chr12.1217 Acer truncatum HOM05D007592 ORTHO05D004645 4.7e-11 71.2 92 50.0
Atru.chr3.1033 Acer truncatum HOM05D007592 ORTHO05D004645 6.2e-11 70.9 103 41.7
Atru.chr10.191 Acer truncatum HOM05D007592 ORTHO05D004645 8.1e-11 70.5 92 45.7
Atru.chr4.1791 Acer truncatum HOM05D007592 ORTHO05D004645 2.4e-10 68.9 91 45.1
Atru.chr8.1611 Acer truncatum HOM05D007592 ORTHO05D004645 2.4e-10 68.9 95 46.3
CANSAT35G0055 Cannabis sativa HOM05D007592 ORTHO05D004645 3.1e-10 68.6 94 46.8
Manes.04G041320 Manihot esculenta HOM05D007592 ORTHO05D004645 4.0e-10 68.2 96 42.7
AL5G14150 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 5.2e-10 67.8 41 75.6
CANSAT64G2577 Cannabis sativa HOM05D007592 ORTHO05D004645 1.2e-09 66.6 106 42.5
Manes.14G157656 Manihot esculenta HOM05D007743 ORTHO05D010219 2.0e-09 65.9 49 59.2
Manes.03G086209 Manihot esculenta HOM05D007592 ORTHO05D004645 2.6e-09 65.5 49 59.2
Manes.12G071166 Manihot esculenta HOM05D007743 ORTHO05D010219 2.6e-09 65.5 49 59.2
AL1G39540 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 9.9e-09 63.5 41 68.3
Atru.chr11.101 Acer truncatum HOM05D007592 ORTHO05D004645 1.1e-07 60.1 95 42.1
AT2G13760 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 1.1e-07 60.1 78 48.7
Ciclev10003711m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.4e-07 59.7 99 41.4
Ciclev10003950m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.9e-07 59.3 49 57.1
Manes.15G155750 Manihot esculenta HOM05D007743 ORTHO05D010219 2.4e-07 58.9 40 62.5
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.2e-07 58.2 110 40.9
FAN18G2940 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.2e-07 58.2 110 40.9
Atru.chr11.1181 Acer truncatum HOM05D000214 ORTHO05D000131 5.4e-07 57.8 43 62.8
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 5.4e-07 57.8 99 40.4
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 7.1e-07 57.4 109 42.2
FAN08G2536 Fragaria x ananassa HOM05D007743 ORTHO05D004645 7.1e-07 57.4 109 42.2
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 7.1e-07 57.4 109 42.2
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 7.1e-07 57.4 109 42.2
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 7.1e-07 57.4 109 42.2
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 7.1e-07 57.4 109 42.2
CANSAT64G0010 Cannabis sativa HOM05D007592 ORTHO05D004645 2.1e-06 55.8 79 43.0
Manes.13G094101 Manihot esculenta HOM05D007592 ORTHO05D004645 2.1e-06 55.8 85 41.2
AT1G66235 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 3.5e-06 55.1 100 36.0
CARHR258700 Cardamine hirsuta HOM05D007592 ORTHO05D004645 3.5e-06 55.1 104 35.6
Atru.chr5.2435 Acer truncatum HOM05D007743 ORTHO05D004645 4.6e-06 54.7 97 38.1
BcaB04g19609 Brassica carinata HOM05D007743 ORTHO05D004645 6.0e-06 54.3 65 49.2
Oeu053537.1 Olea europaea HOM05D007592 ORTHO05D004645 6.0e-06 54.3 96 39.6
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 7.8e-06 53.9 107 37.4


User provided reference genes

Program Settings