Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL9U10760 Arabidopsis lyrata HOM05D000033 ORTHO05D011302 3.0e-143 511.9 270 100.0
Aa31LG9G4580 Aethionema arabicum HOM05D000033 ORTHO05D007915 1.0e-47 194.5 407 37.8
Thhalv10024625m.g Eutrema salsugineum HOM05D000033 ORTHO05D007915 9.8e-46 188.0 406 37.7
THA.LOC104808773 Tarenaya hassleriana HOM05D000033 ORTHO05D007915 9.8e-46 188.0 412 36.4
BcaB03g14570 Brassica carinata HOM05D000033 ORTHO05D007915 1.7e-42 177.2 356 41.6
Sp3g22430 Schrenkiella parvula HOM05D000033 ORTHO05D007915 1.3e-37 161.0 409 34.7
Carub.0003s2507 Capsella rubella HOM05D000033 ORTHO05D007915 8.3e-37 158.3 411 33.8
AL3G40280 Arabidopsis lyrata HOM05D000033 ORTHO05D007915 2.4e-36 156.8 411 34.1
AT3G24660 Arabidopsis thaliana HOM05D000033 ORTHO05D007915 5.4e-36 155.6 411 33.8
Gohir.A11G135700 Gossypium hirsutum HOM05D000033 ORTHO05D007915 5.9e-35 152.1 411 32.1
Thhalv10002428m.g Eutrema salsugineum HOM05D000033 ORTHO05D007915 7.8e-35 151.8 411 33.6
Gorai.007G152400 Gossypium raimondii HOM05D000033 ORTHO05D007915 1.1e-33 147.9 411 31.6
GSVIVG01028547001 Vitis vinifera HOM05D000033 ORTHO05D007915 3.6e-32 142.9 356 34.3
Potri.002G251700 Populus trichocarpa HOM05D000033 ORTHO05D007915 8.0e-32 141.7 413 31.7
Sp7g10690 Schrenkiella parvula HOM05D000033 ORTHO05D007915 1.4e-31 141.0 363 36.6
DCAR_000538 Daucus carota HOM05D000033 ORTHO05D007915 3.1e-31 139.8 352 32.7
BcaC01g03262 Brassica carinata HOM05D000033 ORTHO05D007915 4.0e-31 139.4 411 32.4
Lalb_Chr03g0041951 Lupinus albus HOM05D000033 ORTHO05D007915 5.2e-31 139.0 425 30.4
Gohir.D11G142000 Gossypium hirsutum HOM05D000033 ORTHO05D007915 1.5e-30 137.5 416 31.0
Sabra02G0191300 Salix brachista HOM05D000033 ORTHO05D007915 1.5e-30 137.5 412 30.8
Lj1A82T75 Lonicera japonica HOM05D000033 ORTHO05D007915 2.0e-30 137.1 410 30.5
C03p54240 Brassica napus HOM05D000033 ORTHO05D007915 2.6e-30 136.7 415 32.0
BolC3t17708H Brassica oleracea HOM05D000033 ORTHO05D007915 4.4e-30 136.0 411 32.1
COL.COLO4_36859 Corchorus olitorius HOM05D000033 ORTHO05D007915 4.4e-30 136.0 414 30.7
MD10G1169200 Malus domestica HOM05D000033 ORTHO05D007915 9.8e-30 134.8 414 30.4
RcHm_v2.0_Chr6g0285321 Rosa chinensis HOM05D000033 ORTHO05D007915 1.3e-29 134.4 417 30.7
Thecc.01G229700 Theobroma cacao HOM05D000033 ORTHO05D007915 1.7e-29 134.0 420 30.2
Lj1g0012508 Lotus japonicus HOM05D000033 ORTHO05D007915 1.1e-28 131.3 420 30.0
PGR083G2898 Punica granatum HOM05D000033 ORTHO05D007915 1.4e-28 131.0 410 29.8
FvH4_2g19550 Fragaria vesca HOM05D000033 ORTHO05D007915 1.9e-28 130.6 417 30.2
FAN24G3279 Fragaria x ananassa HOM05D000033 ORTHO05D007915 1.9e-28 130.6 417 30.2
Prupe.8G206900 Prunus persica HOM05D000033 ORTHO05D007915 2.4e-28 130.2 413 30.3
Dinv19227 Davidia involucrata HOM05D000033 ORTHO05D007915 3.2e-28 129.8 411 30.9
QL09p044460 Quercus lobata HOM05D000033 ORTHO05D007915 4.1e-28 129.4 420 29.8
FAN15G2420 Fragaria x ananassa HOM05D000033 ORTHO05D007915 5.4e-28 129.0 420 30.0
Haze_24767 Corylus avellana HOM05D000033 ORTHO05D007915 7.0e-28 128.6 424 30.0
A03p43870 Brassica napus HOM05D000033 ORTHO05D007915 9.2e-28 128.3 415 31.6
BraA03t13519Z Brassica rapa HOM05D000033 ORTHO05D007915 9.2e-28 128.3 415 31.6
Eucgr.H00812 Eucalyptus grandis HOM05D000033 ORTHO05D007915 1.2e-27 127.9 419 29.8
MD05G1179600 Malus domestica HOM05D000033 ORTHO05D007915 1.6e-27 127.5 411 30.4
Cfa002539 Carpinus fangiana HOM05D000033 ORTHO05D007915 2.0e-27 127.1 426 29.8
Duzib138G0921 Durio zibethinus HOM05D000033 ORTHO05D007915 2.0e-27 127.1 416 30.0
Sed0026775 Sechium edule HOM05D000033 ORTHO05D007915 1.3e-26 124.4 411 30.2
VMungo1383G2507 Vigna mungo HOM05D000033 ORTHO05D007915 1.3e-26 124.4 413 30.0
CAN.G620.2 Capsicum annuum HOM05D000033 ORTHO05D007915 2.3e-26 123.6 407 32.4
TWI59G1082 Tripterygium wilfordii HOM05D000033 ORTHO05D007915 2.3e-26 123.6 410 29.5
Ca_22683_v3 Cicer arietinum L. HOM05D000033 ORTHO05D007915 3.9e-26 122.9 418 29.9
TPR.G23276 Trifolium pratense HOM05D000033 ORTHO05D007915 8.6e-26 121.7 416 29.3
arahy.Tifrunner.gnm1.ann1.76XYX5 Arachis hypogaea HOM05D000033 ORTHO05D007915 1.1e-25 121.3 421 29.9
arahy.Tifrunner.gnm1.ann1.E7IC8N Arachis hypogaea HOM05D000033 ORTHO05D007915 1.9e-25 120.6 421 29.9
Lalb_Chr19g0125471 Lupinus albus HOM05D000033 ORTHO05D007915 1.9e-25 120.6 416 29.6
FAN27G0417 Fragaria x ananassa HOM05D000033 ORTHO05D007915 7.3e-25 118.6 347 31.7
TAR365G0646 Trochodendron aralioides HOM05D000029 ORTHO05D007915 1.2e-24 117.9 332 32.5
Glyma.08G357200 Glycine max HOM05D000033 ORTHO05D007915 2.1e-24 117.1 340 31.8
Glyma.18G175700 Glycine max HOM05D000033 ORTHO05D007915 2.1e-24 117.1 340 31.2
Rhsim13G0042700 Rhododendron simsii HOM05D000033 ORTHO05D007915 2.1e-24 117.1 406 30.3
MSTRG.18376 Avicennia marina HOM05D000033 ORTHO05D007915 4.7e-24 115.9 411 29.0
HanXRQChr04g0109121 Helianthus annuus HOM05D000033 ORTHO05D007915 6.2e-24 115.5 410 28.8
Actinidia37577 Actinidia chinensis HOM05D000033 ORTHO05D007915 2.3e-23 113.6 416 28.8
Solyc09g061930.4 Solanum lycopersicum HOM05D000033 ORTHO05D007915 2.3e-23 113.6 406 28.6
PGSC0003DMG400015806 Solanum tuberosum HOM05D000033 ORTHO05D007915 2.3e-23 113.6 407 31.0
MSTRG.17540 Avicennia marina HOM05D000033 ORTHO05D007915 3.1e-23 113.2 408 29.4
Psat3g142800 Pisum sativum HOM05D000033 ORTHO05D007915 3.1e-23 113.2 416 28.4
Sopen09g025010 Solanum pennellii HOM05D000033 ORTHO05D007915 3.1e-23 113.2 407 28.5
Manes.13G043700 Manihot esculenta HOM05D000033 ORTHO05D007915 4.0e-23 112.8 409 28.4
Atru.chr5.1874 Acer truncatum HOM05D000033 ORTHO05D007915 1.2e-22 111.3 413 28.8
CARHR101030 Cardamine hirsuta HOM05D000033 ORTHO05D007915 2.0e-22 110.5 404 28.5
Nitab4.5_0001056g0010 Nicotiana tabacum HOM05D000033 ORTHO05D007915 2.6e-22 110.2 410 28.0
SalBow6G5242 Salvia bowleyana HOM05D000033 ORTHO05D007915 5.8e-22 109.0 414 29.2
Nitab4.5_0001657g0020 Nicotiana tabacum HOM05D000033 ORTHO05D007915 7.5e-22 108.6 410 28.5
CiPaw.03G152200 Carya illinoinensis HOM05D000033 ORTHO05D007915 1.7e-21 107.5 425 27.3
Nn1g03131 Nelumbo nucifera HOM05D000033 ORTHO05D007915 1.7e-21 107.5 410 28.5
Cpa.g.sc8.184 Carica papaya HOM05D000033 ORTHO05D007915 2.2e-21 107.1 415 28.0
SGA_v2.0_scaffold3G01587 Striga asiatica HOM05D000033 ORTHO05D007915 8.3e-21 105.1 408 29.2
CANSAT11G1230 Cannabis sativa HOM05D000033 ORTHO05D007915 1.1e-20 104.8 422 28.2
Phvul.008G122400 Phaseolus vulgaris HOM05D000033 ORTHO05D007915 1.4e-20 104.4 392 29.1
CsaV3_7G025730 Cucumis sativus L. HOM05D000033 ORTHO05D007915 3.2e-20 103.2 411 27.7
Hund05527 Selenicereus undatus HOM05D000033 ORTHO05D007915 3.2e-20 103.2 411 27.3
AUR62008885 Chenopodium quinoa HOM05D000033 ORTHO05D007915 2.1e-19 100.5 410 29.0
MELO3C020998.2 Cucumis melo HOM05D000033 ORTHO05D007915 2.1e-19 100.5 340 30.9
CiPaw.04G107500 Carya illinoinensis HOM05D000033 ORTHO05D007915 4.6e-19 99.4 421 26.8
Lsat_1_v5_gn_5_179560 Lactuca sativa HOM05D000033 ORTHO05D007915 6.0e-19 99.0 414 27.8
Migut.N02254 Erythranthe guttata HOM05D000033 ORTHO05D007915 7.8e-19 98.6 414 28.0
Aqoxy5G00060 Aquilegia oxysepala HOM05D000033 ORTHO05D007915 2.3e-18 97.1 414 26.6
Peaxi162Scf00052g01012 Petunia axillaris HOM05D000033 ORTHO05D007915 2.3e-18 97.1 410 27.1
EL10Ac7g17801 Beta vulgaris HOM05D000033 ORTHO05D007915 3.0e-18 96.7 409 27.1
Hma1.2p1_2697F.1_g327050 Hydrangea macrophylla HOM05D000033 ORTHO05D007915 8.6e-18 95.1 411 27.3
Oeu052115.1 Olea europaea HOM05D000033 ORTHO05D007915 8.6e-18 95.1 419 27.7
ClCG09G009200 Citrullus lanatus HOM05D000033 ORTHO05D007915 1.9e-17 94.0 335 28.4
Oeu015458.1 Olea europaea HOM05D000033 ORTHO05D007915 2.5e-17 93.6 343 28.9
Sc05g0002350 Simmondsia chinensis HOM05D000033 ORTHO05D007915 7.3e-17 92.0 409 26.4
Actinidia30097 Actinidia chinensis HOM05D000033 ORTHO05D007915 1.2e-16 91.3 268 31.3
Medtr7g059225 Medicago truncatula HOM05D000033 ORTHO05D007915 1.2e-16 91.3 420 27.1
PSO478G5147 Papaver somniferum HOM05D000033 ORTHO05D007915 6.2e-16 89.0 208 32.2
CDE09G1269 Ceratophyllum demersum HOM05D000033 ORTHO05D007915 8.1e-16 88.6 405 26.9
HanXRQChr13g0409111 Helianthus annuus HOM05D000033 ORTHO05D007915 1.1e-15 88.2 410 26.3
CDE02G4635 Ceratophyllum demersum HOM05D000033 ORTHO05D007915 1.4e-15 87.8 405 26.7
PSO017G4325 Papaver somniferum HOM05D000033 ORTHO05D007915 1.4e-15 87.8 208 31.7
MBI07_g19555_MAGBIO Magnolia biondii HOM05D000033 ORTHO05D007915 3.1e-15 86.7 418 26.1
vmacro02739 Vaccinium macrocarpon HOM05D000033 ORTHO05D007915 2.6e-14 83.6 341 28.4
CSS0035548 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D007915 7.6e-14 82.0 416 26.0
CSS0045408 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D007915 7.6e-14 82.0 416 26.0
ECA248G3720 Erigeron canadensis HOM05D000033 ORTHO05D007915 1.3e-13 81.3 390 28.7
CAN.G133.7 Capsicum annuum HOM05D000033 ORTHO05D007915 1.1e-12 78.2 336 28.0
Duzib133G1315 Durio zibethinus HOM05D000033 ORTHO05D007915 1.4e-12 77.8 53 69.8
Nn3g19888 Nelumbo nucifera HOM05D000033 ORTHO05D007915 1.4e-12 77.8 410 26.3
TAR362G0216 Trochodendron aralioides HOM05D000033 ORTHO05D007915 1.7e-10 70.9 303 26.1
AUR62031823 Chenopodium quinoa HOM05D000033 ORTHO05D007915 3.0e-10 70.1 298 27.9
CAN.G575.104 Capsicum annuum HOM05D000033 ORTHO05D007915 1.5e-09 67.8 111 42.3
Cc01_g17320 Coffea canephora HOM05D000033 ORTHO05D007915 1.9e-09 67.4 109 44.0
HPP92_022074 Vanilla planifolia HOM05D000033 ORTHO05D007915 5.2e-07 59.3 109 38.5
Manes.12G042800 Manihot esculenta HOM05D000033 ORTHO05D007915 1.5e-06 57.8 248 27.8
ATR0088G039 Amborella trichopoda HOM05D000033 ORTHO05D007915 2.6e-06 57.0 109 37.6
Ciclev10019548m.g Citrus clementina HOM05D000033 ORTHO05D007915 2.6e-06 57.0 109 38.5
SalBow1G4709 Salvia bowleyana HOM05D000053 ORTHO05D011302 9.9e-06 55.1 126 34.9


User provided reference genes

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