Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL96U10050 Arabidopsis lyrata HOM05D001122 ORTHO05D038588 1.1e-185 653.3 351 100.0
Carub.0004s2034 Capsella rubella HOM05D001122 ORTHO05D001877 1.5e-41 174.5 178 62.9
Sp4g20690 Schrenkiella parvula HOM05D001122 ORTHO05D001877 6.1e-40 169.1 179 58.1
AL4G35590 Arabidopsis lyrata HOM05D001122 ORTHO05D001877 3.4e-38 163.3 150 66.0
AT2G38370 Arabidopsis thaliana HOM05D001122 ORTHO05D001877 2.0e-35 154.1 172 57.6
Thhalv10016492m.g Eutrema salsugineum HOM05D001122 ORTHO05D001877 1.7e-34 151.0 179 56.4
BcaC02g07470 Brassica carinata HOM05D001122 ORTHO05D001877 2.0e-30 137.5 188 50.5
C04p66660 Brassica napus HOM05D001122 ORTHO05D001877 2.0e-30 137.5 188 50.5
BolC4t28168H Brassica oleracea HOM05D001122 ORTHO05D001877 2.0e-30 137.5 188 50.5
BraA04t18404Z Brassica rapa HOM05D001122 ORTHO05D001877 1.1e-28 131.7 187 50.3
CARHR132980 Cardamine hirsuta HOM05D001122 ORTHO05D001877 1.6e-24 117.9 177 48.6
BcaB01g03692 Brassica carinata HOM05D001122 ORTHO05D001877 4.7e-24 116.3 175 49.7
BcaC01g05545 Brassica carinata HOM05D001122 ORTHO05D001877 8.0e-24 115.5 177 49.2
C03p25110 Brassica napus HOM05D001122 ORTHO05D001877 8.0e-24 115.5 177 49.2
BolC3t14902H Brassica oleracea HOM05D001122 ORTHO05D001877 8.0e-24 115.5 177 49.2
A04p29360 Brassica napus HOM05D001122 ORTHO05D001877 1.8e-23 114.4 160 50.0
BraA03t11360Z Brassica rapa HOM05D001122 ORTHO05D001877 2.0e-22 110.9 177 46.9
A03p21230 Brassica napus HOM05D001122 ORTHO05D001877 4.4e-22 109.8 177 48.0
THA.LOC104806629 Tarenaya hassleriana HOM05D001122 ORTHO05D001877 9.8e-22 108.6 173 48.6
Aa31LG5G24080 Aethionema arabicum HOM05D001122 ORTHO05D001877 2.9e-21 107.1 189 43.4
Aa31sc463G20 Aethionema arabicum HOM05D001122 ORTHO05D001877 4.6e-19 99.8 185 38.4
Cpa.g.sc86.25 Carica papaya HOM05D001122 ORTHO05D001877 1.7e-18 97.8 175 41.7
BcaB01g03695 Brassica carinata HOM05D001122 ORTHO05D001877 2.3e-18 97.4 177 45.2
Thhalv10009793m.g Eutrema salsugineum HOM05D001122 ORTHO05D038588 8.6e-18 95.5 156 35.3
BcaB06g29047 Brassica carinata HOM05D001122 ORTHO05D001877 2.5e-17 94.0 134 48.5
CiPaw.10G163900 Carya illinoinensis HOM05D001122 ORTHO05D001877 2.9e-13 80.5 219 34.2
Hund03744 Selenicereus undatus HOM05D001122 ORTHO05D001877 3.7e-13 80.1 213 33.3
TWI74G1328 Tripterygium wilfordii HOM05D001122 ORTHO05D001877 6.4e-13 79.3 222 32.0
Dinv25307 Davidia involucrata HOM05D001122 ORTHO05D001877 1.1e-12 78.6 223 32.3
Cfa017062 Carpinus fangiana HOM05D001122 ORTHO05D001877 1.4e-12 78.2 223 33.6
THA.LOC104806079 Tarenaya hassleriana HOM05D001122 ORTHO05D001877 1.9e-12 77.8 185 36.8
BcaC02g07472 Brassica carinata HOM05D001122 ORTHO05D001877 2.4e-12 77.4 121 44.6
Atru.chr8.2373 Acer truncatum HOM05D001122 ORTHO05D001877 7.0e-12 75.9 216 34.7
EL10Ac7g17055 Beta vulgaris HOM05D001122 ORTHO05D001877 9.2e-12 75.5 208 33.2
Rhsim05G0228900 Rhododendron simsii HOM05D001122 ORTHO05D001877 1.6e-11 74.7 214 31.8
CiPaw.09G218300 Carya illinoinensis HOM05D001122 ORTHO05D001877 2.0e-11 74.3 220 33.6
Thhalv10010401m.g Eutrema salsugineum HOM05D001122 ORTHO05D001877 2.7e-11 73.9 151 39.1
Actinidia11525 Actinidia chinensis HOM05D001122 ORTHO05D001877 7.8e-11 72.4 212 33.0
AL4G35300 Arabidopsis lyrata HOM05D001122 ORTHO05D001877 7.8e-11 72.4 55 65.5
CSS0044199 Camellia sinensis var. sinensis HOM05D001122 ORTHO05D001877 1.0e-10 72.0 205 32.7
CANSAT35G1567 Cannabis sativa HOM05D001122 ORTHO05D001877 1.0e-10 72.0 215 32.1
MD12G1184800 Malus domestica HOM05D001122 ORTHO05D001877 1.7e-10 71.2 215 33.0
CSS0030369 Camellia sinensis var. sinensis HOM05D001122 ORTHO05D001877 2.3e-10 70.9 181 33.7
Glyma.01G131300 Glycine max HOM05D001122 ORTHO05D001877 2.3e-10 70.9 217 33.6
Sp5g10560 Schrenkiella parvula HOM05D001122 ORTHO05D001877 2.3e-10 70.9 151 39.1
Manes.09G115600 Manihot esculenta HOM05D001122 ORTHO05D001877 3.0e-10 70.5 214 33.2
PSO384G5075 Papaver somniferum HOM05D001122 ORTHO05D001877 3.0e-10 70.5 213 31.0
QL07p032789 Quercus lobata HOM05D001122 ORTHO05D001877 3.0e-10 70.5 217 31.8
BcaB04g19139 Brassica carinata HOM05D051966 ORTHO05D038570 8.6e-10 68.9 120 35.0
Migut.J00063 Erythranthe guttata HOM05D001122 ORTHO05D001877 8.6e-10 68.9 190 33.2
Glyma.03G037500 Glycine max HOM05D001122 ORTHO05D001877 1.1e-09 68.6 211 34.1
HanXRQChr10g0298251 Helianthus annuus HOM05D001122 ORTHO05D001877 1.1e-09 68.6 202 36.6
Nn2g11099 Nelumbo nucifera HOM05D001122 ORTHO05D001877 1.1e-09 68.6 212 32.1
Sp7g08830 Schrenkiella parvula HOM05D001122 ORTHO05D001877 1.1e-09 68.6 140 40.0
Dinv10548 Davidia involucrata HOM05D001122 ORTHO05D001877 1.5e-09 68.2 209 33.5
Hma1.2p1_1052F.1_g252360 Hydrangea macrophylla HOM05D001122 ORTHO05D001877 1.5e-09 68.2 211 31.3
BcaB01g00426 Brassica carinata HOM05D001122 ORTHO05D001877 3.3e-09 67.0 148 37.8
Psat7g230000 Pisum sativum HOM05D001122 ORTHO05D001877 3.3e-09 67.0 204 31.4
CARHR212400 Cardamine hirsuta HOM05D038982 ORTHO05D033000 5.6e-09 66.2 153 26.8
ClCG04G006480 Citrullus lanatus HOM05D001122 ORTHO05D001877 5.6e-09 66.2 203 32.0
Lj3g0016412 Lotus japonicus HOM05D001122 ORTHO05D001877 5.6e-09 66.2 207 33.3
TWI77G0311 Tripterygium wilfordii HOM05D001122 ORTHO05D001877 5.6e-09 66.2 208 30.8
Oeu026964.1 Olea europaea HOM05D001122 ORTHO05D001877 1.2e-08 65.1 189 32.3
Prupe.6G289900 Prunus persica HOM05D001122 ORTHO05D001877 1.2e-08 65.1 213 30.0
Gohir.A02G004900 Gossypium hirsutum HOM05D001122 ORTHO05D001877 1.6e-08 64.7 196 33.2
C08p26890 Brassica napus HOM05D001122 ORTHO05D001877 4.7e-08 63.2 155 35.5
Lsat_1_v5_gn_5_148221 Lactuca sativa HOM05D001122 ORTHO05D001877 4.7e-08 63.2 192 32.3
Sed0001794 Sechium edule HOM05D001122 ORTHO05D001877 6.2e-08 62.8 205 31.7
Sc02g0000820 Simmondsia chinensis HOM05D001122 ORTHO05D001877 8.1e-08 62.4 205 30.2
MELO3C026053.2 Cucumis melo HOM05D001122 ORTHO05D001877 1.1e-07 62.0 201 31.3
BcaB01g03698 Brassica carinata HOM05D001122 ORTHO05D001877 1.4e-07 61.6 56 71.4
BcaC04g22401 Brassica carinata HOM05D001122 ORTHO05D001877 1.8e-07 61.2 155 34.8
Carub.0005s1806 Capsella rubella HOM05D001122 ORTHO05D001877 2.3e-07 60.8 175 32.0
FAN05G1096 Fragaria x ananassa HOM05D001122 ORTHO05D001877 2.3e-07 60.8 209 29.2
C09p19750 Brassica napus HOM05D001122 ORTHO05D001877 3.1e-07 60.5 155 34.8
BolC9t54877H Brassica oleracea HOM05D001122 ORTHO05D001877 3.1e-07 60.5 155 34.8
CsaV3_UNG107770 Cucumis sativus L. HOM05D001122 ORTHO05D001877 3.1e-07 60.5 209 31.6
BcaB01g00493 Brassica carinata HOM05D001122 ORTHO05D001877 4.0e-07 60.1 155 34.8
A09p44840 Brassica napus HOM05D001122 ORTHO05D001877 4.0e-07 60.1 155 36.1
BolC8t50306H Brassica oleracea HOM05D001122 ORTHO05D001877 4.0e-07 60.1 155 34.8
Medtr7g072550 Medicago truncatula HOM05D001122 ORTHO05D001877 5.2e-07 59.7 215 30.7
AT3G51720 Arabidopsis thaliana HOM05D001122 ORTHO05D001877 8.9e-07 58.9 169 33.1
CSS0020386 Camellia sinensis var. sinensis HOM05D001122 ORTHO05D001877 1.2e-06 58.5 197 31.0
CARHR161330 Cardamine hirsuta HOM05D001122 ORTHO05D001877 1.2e-06 58.5 167 33.5
Sabra06G0083500 Salix brachista HOM05D001122 ORTHO05D001877 1.2e-06 58.5 210 31.9
CsaV3_4G027040 Cucumis sativus L. HOM05D001122 ORTHO05D001877 1.5e-06 58.2 190 32.6
Psat3g121320 Pisum sativum HOM05D001122 ORTHO05D001877 2.0e-06 57.8 224 29.5
GSVIVG01030215001 Vitis vinifera HOM05D001122 ORTHO05D003607 2.0e-06 57.8 129 38.0
MD04G1171400 Malus domestica HOM05D001122 ORTHO05D001877 2.6e-06 57.4 213 29.6
Oeu060448.2 Olea europaea HOM05D001122 ORTHO05D001877 2.6e-06 57.4 223 29.1
arahy.Tifrunner.gnm1.ann1.5K0G3N Arachis hypogaea HOM05D001122 ORTHO05D001877 4.4e-06 56.6 161 31.7
arahy.Tifrunner.gnm1.ann1.MH7SIY Arachis hypogaea HOM05D001122 ORTHO05D001877 4.4e-06 56.6 161 31.7
BraA09t39946Z Brassica rapa HOM05D001122 ORTHO05D001877 4.4e-06 56.6 155 36.1
Actinidia29048 Actinidia chinensis HOM05D001122 ORTHO05D001877 5.8e-06 56.2 210 30.0
FAN09G1334 Fragaria x ananassa HOM05D001122 ORTHO05D001877 5.8e-06 56.2 210 28.1


User provided reference genes

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