Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G35550 Arabidopsis lyrata HOM05D001122 ORTHO05D001877 6.1e-37 157.1 89 100.0
AL96U10020 Arabidopsis lyrata HOM05D001122 ORTHO05D001877 6.1e-37 157.1 89 100.0
AL4G35590 Arabidopsis lyrata HOM05D001122 ORTHO05D001877 4.5e-32 141.0 93 90.3
Carub.0004s2034 Capsella rubella HOM05D001122 ORTHO05D001877 5.9e-32 140.6 93 89.2
Thhalv10016492m.g Eutrema salsugineum HOM05D001122 ORTHO05D001877 1.5e-27 125.9 93 78.5
Sp4g20690 Schrenkiella parvula HOM05D001122 ORTHO05D001877 4.4e-27 124.4 93 80.6
BcaC02g07470 Brassica carinata HOM05D001122 ORTHO05D001877 1.7e-23 112.5 91 73.6
A04p29360 Brassica napus HOM05D001122 ORTHO05D001877 1.7e-23 112.5 91 73.6
C04p66660 Brassica napus HOM05D001122 ORTHO05D001877 1.7e-23 112.5 91 73.6
BolC4t28168H Brassica oleracea HOM05D001122 ORTHO05D001877 1.7e-23 112.5 91 73.6
BraA04t18404Z Brassica rapa HOM05D001122 ORTHO05D001877 2.9e-23 111.7 91 72.5
BcaB06g29047 Brassica carinata HOM05D001122 ORTHO05D001877 5.5e-22 107.5 95 72.6
CARHR132980 Cardamine hirsuta HOM05D001122 ORTHO05D001877 1.4e-20 102.8 95 69.5
A03p21230 Brassica napus HOM05D001122 ORTHO05D001877 6.8e-20 100.5 94 73.4
BraA03t11360Z Brassica rapa HOM05D001122 ORTHO05D001877 6.8e-20 100.5 94 73.4
BcaB01g03692 Brassica carinata HOM05D001122 ORTHO05D001877 1.5e-19 99.4 94 72.3
BcaB01g03695 Brassica carinata HOM05D001122 ORTHO05D001877 1.7e-18 95.9 94 70.2
BcaC01g05545 Brassica carinata HOM05D001122 ORTHO05D001877 1.7e-18 95.9 94 70.2
C03p25110 Brassica napus HOM05D001122 ORTHO05D001877 1.7e-18 95.9 94 70.2
BolC3t14902H Brassica oleracea HOM05D001122 ORTHO05D001877 1.7e-18 95.9 94 70.2
THA.LOC104806629 Tarenaya hassleriana HOM05D001122 ORTHO05D001877 1.2e-16 89.7 90 67.8
AT2G38370 Arabidopsis thaliana HOM05D001122 ORTHO05D001877 3.5e-16 88.2 56 87.5
BcaC02g07473 Brassica carinata HOM05D001122 ORTHO05D001877 5.0e-15 84.3 79 65.8
THA.LOC104806079 Tarenaya hassleriana HOM05D001122 ORTHO05D001877 8.6e-15 83.6 95 61.1
Aa31LG5G24080 Aethionema arabicum HOM05D001122 ORTHO05D001877 3.0e-12 75.1 83 61.4
AT3G51720 Arabidopsis thaliana HOM05D001122 ORTHO05D001877 4.0e-12 74.7 87 56.3
Thhalv10010401m.g Eutrema salsugineum HOM05D001122 ORTHO05D001877 6.8e-12 73.9 89 56.2
Actinidia29048 Actinidia chinensis HOM05D001122 ORTHO05D001877 3.4e-11 71.6 87 50.6
Aa31sc463G20 Aethionema arabicum HOM05D001122 ORTHO05D001877 5.7e-11 70.9 89 55.1
Prupe.6G289900 Prunus persica HOM05D001122 ORTHO05D001877 7.5e-11 70.5 85 55.3
Sp5g10560 Schrenkiella parvula HOM05D001122 ORTHO05D001877 1.3e-10 69.7 89 55.1
Dinv11391 Davidia involucrata HOM05D001122 ORTHO05D001877 1.7e-10 69.3 86 50.0
BcaB01g00426 Brassica carinata HOM05D001122 ORTHO05D001877 2.2e-10 68.9 89 52.8
COL.COLO4_30003 Corchorus olitorius HOM05D001122 ORTHO05D001877 2.8e-10 68.6 95 52.6
Actinidia11525 Actinidia chinensis HOM05D001122 ORTHO05D001877 4.9e-10 67.8 87 48.3
Cfa017062 Carpinus fangiana HOM05D001122 ORTHO05D001877 6.3e-10 67.4 94 48.9
AL5G32170 Arabidopsis lyrata HOM05D001122 ORTHO05D001877 8.3e-10 67.0 87 52.9
Haze_21139 Corylus avellana HOM05D001122 ORTHO05D001877 1.1e-09 66.6 94 48.9
Haze_21145 Corylus avellana HOM05D001122 ORTHO05D001877 1.1e-09 66.6 94 48.9
Duzib151G1105 Durio zibethinus HOM05D001122 ORTHO05D001877 1.1e-09 66.6 96 52.1
Thecc.04G155100 Theobroma cacao HOM05D001122 ORTHO05D001877 1.1e-09 66.6 96 52.1
CANSAT35G1567 Cannabis sativa HOM05D001122 ORTHO05D001877 5.4e-09 64.3 95 50.5
BcaB01g00491 Brassica carinata HOM05D001122 ORTHO05D001877 9.2e-09 63.5 89 50.6
A09p44840 Brassica napus HOM05D001122 ORTHO05D001877 9.2e-09 63.5 89 50.6
C08p26890 Brassica napus HOM05D001122 ORTHO05D001877 9.2e-09 63.5 89 50.6
BolC8t50306H Brassica oleracea HOM05D001122 ORTHO05D001877 9.2e-09 63.5 89 50.6
BraA09t39946Z Brassica rapa HOM05D001122 ORTHO05D001877 9.2e-09 63.5 89 50.6
Gohir.A02G004900 Gossypium hirsutum HOM05D001122 ORTHO05D001877 9.2e-09 63.5 98 50.0
Gorai.005G006000 Gossypium raimondii HOM05D001122 ORTHO05D001877 9.2e-09 63.5 98 50.0
Carub.0005s1806 Capsella rubella HOM05D001122 ORTHO05D001877 1.2e-08 63.2 87 51.7
QL07p032789 Quercus lobata HOM05D001122 ORTHO05D001877 1.2e-08 63.2 85 50.6
RcHm_v2.0_Chr3g0460971 Rosa chinensis HOM05D001122 ORTHO05D001877 1.6e-08 62.8 85 48.2
CSS0030369 Camellia sinensis var. sinensis HOM05D001122 ORTHO05D001877 2.7e-08 62.0 89 47.2
Duzib212G0698 Durio zibethinus HOM05D001122 ORTHO05D001877 3.5e-08 61.6 96 49.0
MD12G1184800 Malus domestica HOM05D001122 ORTHO05D001877 3.5e-08 61.6 85 50.6
Gohir.D02G005300 Gossypium hirsutum HOM05D001122 ORTHO05D001877 4.5e-08 61.2 98 49.0
MD04G1171400 Malus domestica HOM05D001122 ORTHO05D001877 5.9e-08 60.8 85 49.4
TPR.G4407 Trifolium pratense HOM05D001122 ORTHO05D001877 5.9e-08 60.8 97 49.5
CiPaw.10G163900 Carya illinoinensis HOM05D001122 ORTHO05D001877 7.8e-08 60.5 99 46.5
Sabra06G0083500 Salix brachista HOM05D001122 ORTHO05D001877 7.8e-08 60.5 84 48.8
Hund03744 Selenicereus undatus HOM05D001122 ORTHO05D001877 1.3e-07 59.7 90 46.7
TWI74G1328 Tripterygium wilfordii HOM05D001122 ORTHO05D001877 1.3e-07 59.7 91 45.1
Ah.15g090230 Amaranthus hybridus HOM05D001122 ORTHO05D001877 2.3e-07 58.9 81 45.7
Cpa.g.sc86.25 Carica papaya HOM05D001122 ORTHO05D001877 2.3e-07 58.9 95 47.4
FAN05G1096 Fragaria x ananassa HOM05D001122 ORTHO05D001877 2.3e-07 58.9 85 47.1
Medtr7g072550 Medicago truncatula HOM05D001122 ORTHO05D001877 2.3e-07 58.9 97 46.4
FvH4_6g10230 Fragaria vesca HOM05D001122 ORTHO05D001877 2.9e-07 58.5 85 47.1
FAN14G3888 Fragaria x ananassa HOM05D001122 ORTHO05D001877 2.9e-07 58.5 85 47.1
TAR629G1123 Trochodendron aralioides HOM05D001122 ORTHO05D001877 2.9e-07 58.5 85 45.9
FAN09G1334 Fragaria x ananassa HOM05D001122 ORTHO05D001877 3.9e-07 58.2 84 46.4
Atru.chr8.2373 Acer truncatum HOM05D001122 ORTHO05D001877 5.0e-07 57.8 93 47.3
Lj1g0026787 Lotus japonicus HOM05D001122 ORTHO05D001877 5.0e-07 57.8 99 46.5
MBI15_g27352_MAGBIO Magnolia biondii HOM05D001122 ORTHO05D001877 6.6e-07 57.4 88 47.7
PGR031G0394 Punica granatum HOM05D001122 ORTHO05D001877 6.6e-07 57.4 99 47.5
TAR636G1426 Trochodendron aralioides HOM05D001122 ORTHO05D001877 6.6e-07 57.4 85 45.9
Potri.016G133300 Populus trichocarpa HOM05D001122 ORTHO05D001877 8.6e-07 57.0 95 47.4
arahy.Tifrunner.gnm1.ann1.5K0G3N Arachis hypogaea HOM05D001122 ORTHO05D001877 1.1e-06 56.6 103 42.7
Glyma.01G131300 Glycine max HOM05D001122 ORTHO05D001877 1.1e-06 56.6 97 44.3
Hma1.2p1_1052F.1_g252360 Hydrangea macrophylla HOM05D001122 ORTHO05D001877 1.1e-06 56.6 95 46.3
arahy.Tifrunner.gnm1.ann1.MH7SIY Arachis hypogaea HOM05D001122 ORTHO05D001877 1.5e-06 56.2 102 42.2
Sabra04G0151000 Salix brachista HOM05D001122 ORTHO05D001877 1.5e-06 56.2 86 47.7
DCAR_028909 Daucus carota HOM05D001122 ORTHO05D001877 1.9e-06 55.8 87 49.4
FAN02G1434 Fragaria x ananassa HOM05D001122 ORTHO05D001877 1.9e-06 55.8 85 45.9
FAN05G3468 Fragaria x ananassa HOM05D001122 ORTHO05D001877 1.9e-06 55.8 84 46.4
Dinv25307 Davidia involucrata HOM05D001122 ORTHO05D001877 2.5e-06 55.5 82 45.1
Rhsim05G0228900 Rhododendron simsii HOM05D001122 ORTHO05D001877 2.5e-06 55.5 89 44.9
ClCG04G006480 Citrullus lanatus HOM05D001122 ORTHO05D001877 3.3e-06 55.1 87 49.4
Phvul.010G067400 Phaseolus vulgaris HOM05D001122 ORTHO05D001877 3.3e-06 55.1 97 43.3
arahy.Tifrunner.gnm1.ann1.P0IKGX Arachis hypogaea HOM05D001122 ORTHO05D001877 4.3e-06 54.7 79 46.8
MSTRG.18958 Avicennia marina HOM05D001122 ORTHO05D001877 4.3e-06 54.7 78 46.2
Ca_07747_v3 Cicer arietinum L. HOM05D001122 ORTHO05D001877 4.3e-06 54.7 97 46.4
Migut.J00063 Erythranthe guttata HOM05D001122 ORTHO05D001877 4.3e-06 54.7 100 45.0
HanXRQChr01g0000001 Helianthus annuus HOM05D001122 ORTHO05D001877 4.3e-06 54.7 88 48.9
Lalb_Chr12g0207571 Lupinus albus HOM05D001122 ORTHO05D001877 4.3e-06 54.7 97 45.4
PSO384G5075 Papaver somniferum HOM05D001122 ORTHO05D001877 4.3e-06 54.7 89 41.6
Cc06_g00550 Coffea canephora HOM05D001122 ORTHO05D001877 5.6e-06 54.3 95 43.2
Sed0001794 Sechium edule HOM05D001122 ORTHO05D001877 5.6e-06 54.3 85 50.6
vmacro20355 Vaccinium macrocarpon HOM05D001122 ORTHO05D001877 5.6e-06 54.3 88 44.3
VMungo1383G2320 Vigna mungo HOM05D001122 ORTHO05D001877 5.6e-06 54.3 92 44.6
AUR62006350 Chenopodium quinoa HOM05D001122 ORTHO05D001877 7.3e-06 53.9 88 43.2
Glyma.18G211800 Glycine max HOM05D001122 ORTHO05D001877 7.3e-06 53.9 93 45.2
Sc02g0000820 Simmondsia chinensis HOM05D001122 ORTHO05D001877 7.3e-06 53.9 85 48.2
arahy.Tifrunner.gnm1.ann1.Y8SUHG Arachis hypogaea HOM05D001122 ORTHO05D001877 9.5e-06 53.5 79 45.6
CiPaw.09G218300 Carya illinoinensis HOM05D001122 ORTHO05D001877 9.5e-06 53.5 97 44.3
Ca_19776_v3 Cicer arietinum L. HOM05D001122 ORTHO05D001877 9.5e-06 53.5 98 44.9
Medtr4g029090 Medicago truncatula HOM05D001122 ORTHO05D001877 9.5e-06 53.5 98 43.9
Oeu060448.2 Olea europaea HOM05D001122 ORTHO05D001877 9.5e-06 53.5 87 42.5


User provided reference genes

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