Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL960U10010 Arabidopsis lyrata HOM05D005596 ORTHO05D006994 5.2e-90 334.7 218 100.0
Carub.0008s1212 Capsella rubella HOM05D005596 ORTHO05D006994 1.5e-57 226.9 119 95.0
AL8G26370 Arabidopsis lyrata HOM05D005596 ORTHO05D006994 1.2e-54 217.2 119 92.4
BraA02t06264Z Brassica rapa HOM05D005596 ORTHO05D006994 1.2e-49 200.7 121 85.1
BolC2t08136H Brassica oleracea HOM05D005596 ORTHO05D006994 2.6e-49 199.5 120 85.0
BcaC03g14556 Brassica carinata HOM05D005596 ORTHO05D006994 3.4e-49 199.1 120 85.0
A02p12010 Brassica napus HOM05D005596 ORTHO05D006994 5.8e-49 198.4 120 84.2
C02p20060 Brassica napus HOM05D005596 ORTHO05D006994 5.8e-49 198.4 120 85.0
BcaB05g23951 Brassica carinata HOM05D005596 ORTHO05D006994 3.8e-48 195.7 120 84.2
Sp6g14270 Schrenkiella parvula HOM05D005596 ORTHO05D006994 1.1e-47 194.1 122 82.8
Thhalv10013712m.g Eutrema salsugineum HOM05D005596 ORTHO05D006994 5.5e-47 191.8 119 82.4
CARHR264960 Cardamine hirsuta HOM05D005596 ORTHO05D006994 1.2e-46 190.7 119 81.5
Aa31LG3G8420 Aethionema arabicum HOM05D005596 ORTHO05D006994 3.3e-44 182.6 120 75.8
THA.LOC104811480 Tarenaya hassleriana HOM05D005596 ORTHO05D006994 7.2e-39 164.9 119 68.9
Sabra12G0100700 Salix brachista HOM05D005596 ORTHO05D006994 5.1e-37 158.7 123 64.2
Potri.012G133900 Populus trichocarpa HOM05D005596 ORTHO05D006994 1.5e-36 157.1 123 64.2
FAN06G1108 Fragaria x ananassa HOM05D005596 ORTHO05D006994 3.3e-36 156.0 121 66.9
FAN06G4254 Fragaria x ananassa HOM05D005596 ORTHO05D006994 3.3e-36 156.0 121 66.9
QL09p015809 Quercus lobata HOM05D005596 ORTHO05D006994 3.3e-36 156.0 122 65.6
RcHm_v2.0_Chr1g0376671 Rosa chinensis HOM05D005596 ORTHO05D006994 7.4e-36 154.8 112 69.6
FAN03G2823 Fragaria x ananassa HOM05D005596 ORTHO05D006994 9.7e-36 154.5 121 65.3
FAN10G2089 Fragaria x ananassa HOM05D005596 ORTHO05D006994 9.7e-36 154.5 121 66.1
FAN10G3222 Fragaria x ananassa HOM05D005596 ORTHO05D006994 9.7e-36 154.5 121 66.1
MD01G1196400 Malus domestica HOM05D005596 ORTHO05D006994 9.7e-36 154.5 121 65.3
QL09p016062 Quercus lobata HOM05D005596 ORTHO05D006994 9.7e-36 154.5 122 64.8
MELO3C006872.2 Cucumis melo HOM05D005596 ORTHO05D006994 1.3e-35 154.1 108 70.4
Glyma.10G239200 Glycine max HOM05D005596 ORTHO05D006994 1.3e-35 154.1 122 62.3
Ciclev10005112m.g Citrus clementina HOM05D005596 ORTHO05D006994 2.2e-35 153.3 119 63.0
LjContig00238g0007789 Lotus japonicus HOM05D005596 ORTHO05D006994 2.2e-35 153.3 123 63.4
GSVIVG01010628001 Vitis vinifera HOM05D005596 ORTHO05D006994 2.8e-35 152.9 120 64.2
CiPaw.03G102200 Carya illinoinensis HOM05D005596 ORTHO05D006994 3.7e-35 152.5 122 63.1
Sed0010012 Sechium edule HOM05D005596 ORTHO05D006994 3.7e-35 152.5 117 65.8
Dinv35175 Davidia involucrata HOM05D005596 ORTHO05D006994 4.8e-35 152.1 114 65.8
Haze_13762 Corylus avellana HOM05D005596 ORTHO05D006994 8.2e-35 151.4 119 63.9
DCAR_018164 Daucus carota HOM05D005596 ORTHO05D006994 8.2e-35 151.4 98 73.5
Manes.06G143300 Manihot esculenta HOM05D005596 ORTHO05D006994 8.2e-35 151.4 119 61.3
TPR.G17416 Trifolium pratense HOM05D005596 ORTHO05D006994 8.2e-35 151.4 126 61.1
Cpa.g.sc107.2 Carica papaya HOM05D005596 ORTHO05D006994 1.1e-34 151.0 119 62.2
Thecc.03G170100 Theobroma cacao HOM05D005596 ORTHO05D006994 1.1e-34 151.0 120 62.5
Atru.chr1.530 Acer truncatum HOM05D005596 ORTHO05D006994 1.4e-34 150.6 107 65.4
Cfa008275 Carpinus fangiana HOM05D005596 ORTHO05D006994 1.4e-34 150.6 119 63.9
TWI39G0482 Tripterygium wilfordii HOM05D005596 ORTHO05D006994 1.4e-34 150.6 123 64.2
Ca_10798_v3 Cicer arietinum L. HOM05D005596 ORTHO05D006994 1.8e-34 150.2 122 61.5
Medtr1g101540 Medicago truncatula HOM05D005596 ORTHO05D006994 1.8e-34 150.2 120 61.7
Gohir.D09G040500 Gossypium hirsutum HOM05D005596 ORTHO05D006994 3.1e-34 149.4 122 60.7
Gorai.006G046300 Gossypium raimondii HOM05D005596 ORTHO05D006994 3.1e-34 149.4 122 60.7
Psat6g200160 Pisum sativum HOM05D005596 ORTHO05D006994 3.1e-34 149.4 123 59.3
VMungo0720G0093 Vigna mungo HOM05D005596 ORTHO05D006994 5.3e-34 148.7 125 62.4
CsaV3_3G016780 Cucumis sativus L. HOM05D005596 ORTHO05D006994 9.1e-34 147.9 120 62.5
Nn6g34264 Nelumbo nucifera HOM05D005596 ORTHO05D006994 1.2e-33 147.5 129 58.1
PGR142G4172 Punica granatum HOM05D005596 ORTHO05D006994 1.2e-33 147.5 126 58.7
CANSAT21G1758 Cannabis sativa HOM05D005596 ORTHO05D006994 1.5e-33 147.1 122 61.5
Lalb_Chr06g0160971 Lupinus albus HOM05D005596 ORTHO05D006994 1.5e-33 147.1 123 60.2
Lsat_1_v5_gn_8_7641 Lactuca sativa HOM05D005596 ORTHO05D006994 3.4e-33 146.0 124 59.7
Actinidia34077 Actinidia chinensis HOM05D005596 ORTHO05D006994 5.9e-33 145.2 98 68.4
CSS0004859 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 5.9e-33 145.2 114 64.9
Duzib205G1479 Durio zibethinus HOM05D005596 ORTHO05D006994 5.9e-33 145.2 122 61.5
Solyc03g026260.3 Solanum lycopersicum HOM05D005596 ORTHO05D006994 1.0e-32 144.4 120 58.3
vmacro06726 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 1.0e-32 144.4 110 67.3
Cc02_g03410 Coffea canephora HOM05D005596 ORTHO05D006994 1.3e-32 144.1 98 69.4
CSS0017210 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 1.7e-32 143.7 114 64.0
vmacro06733 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 1.7e-32 143.7 99 71.7
HanXRQChr13g0405601 Helianthus annuus HOM05D005596 ORTHO05D006994 2.2e-32 143.3 102 63.7
MBI12_g25031_MAGBIO Magnolia biondii HOM05D005596 ORTHO05D006994 2.2e-32 143.3 119 57.1
PGSC0003DMG400014264 Solanum tuberosum HOM05D005596 ORTHO05D006994 2.2e-32 143.3 98 66.3
TAR375G0353 Trochodendron aralioides HOM05D005596 ORTHO05D006994 2.9e-32 142.9 98 66.3
Migut.F00380 Erythranthe guttata HOM05D005596 ORTHO05D006994 5.0e-32 142.1 96 67.7
Rhsim03G0176700 Rhododendron simsii HOM05D005596 ORTHO05D006994 6.5e-32 141.7 99 69.7
CDE11G1004 Ceratophyllum demersum HOM05D005596 ORTHO05D006994 1.4e-31 140.6 109 61.5
ClCG05G007790 Citrullus lanatus HOM05D005596 ORTHO05D006994 1.9e-31 140.2 113 61.9
Eucgr.K00221 Eucalyptus grandis HOM05D005596 ORTHO05D006994 2.5e-31 139.8 119 59.7
Ah.07g208910 Amaranthus hybridus HOM05D005596 ORTHO05D006994 3.2e-31 139.4 130 56.9
AUR62016035 Chenopodium quinoa HOM05D005596 ORTHO05D006994 4.2e-31 139.0 119 60.5
Peaxi162Scf00648g00016 Petunia axillaris HOM05D005596 ORTHO05D006994 1.2e-30 137.5 98 62.2
Aqoxy7G00457 Aquilegia oxysepala HOM05D005596 ORTHO05D006994 1.6e-30 137.1 101 58.4
CAN.G548.12 Capsicum annuum HOM05D005596 ORTHO05D006994 2.1e-30 136.7 98 64.3
Eucgr.K00218 Eucalyptus grandis HOM05D005596 ORTHO05D006994 3.6e-30 136.0 122 58.2
AUR62021241 Chenopodium quinoa HOM05D005596 ORTHO05D006994 4.6e-30 135.6 111 61.3
PSO478G4610 Papaver somniferum HOM05D005596 ORTHO05D006994 4.6e-30 135.6 98 63.3
PSO782G2992 Papaver somniferum HOM05D005596 ORTHO05D006994 1.8e-29 133.7 98 62.2
unitig_0.g2489 Utricularia gibba HOM05D005596 ORTHO05D006994 1.8e-29 133.7 104 55.8
MSTRG.8768 Avicennia marina HOM05D005596 ORTHO05D006994 2.3e-29 133.3 96 62.5
Oeu022544.2 Olea europaea HOM05D005596 ORTHO05D006994 5.1e-29 132.1 119 56.3
SalBow4G2853 Salvia bowleyana HOM05D005596 ORTHO05D006994 6.7e-29 131.7 96 61.5
Nitab4.5_0001083g0020 Nicotiana tabacum HOM05D005596 ORTHO05D006994 3.3e-28 129.4 117 53.8
HPP92_020337 Vanilla planifolia HOM05D005596 ORTHO05D006994 5.7e-28 128.6 98 58.2
Nitab4.5_0002394g0030 Nicotiana tabacum HOM05D005596 ORTHO05D006994 9.7e-28 127.9 117 53.8
FAN03G1867 Fragaria x ananassa HOM05D005596 ORTHO05D006994 2.2e-27 126.7 107 60.7
Hund04701 Selenicereus undatus HOM05D005596 ORTHO05D006994 8.2e-27 124.8 117 53.0
arahy.Tifrunner.gnm1.ann1.8H8JUA Arachis hypogaea HOM05D005596 ORTHO05D006994 1.8e-26 123.6 91 63.7
arahy.Tifrunner.gnm1.ann1.EY18QM Arachis hypogaea HOM05D005596 ORTHO05D006994 4.1e-26 122.5 100 61.0
Zm00001eb037540 Zea mays HOM05D005596 ORTHO05D006994 9.4e-23 111.3 106 50.9
ECA233G5181 Erigeron canadensis HOM05D005596 ORTHO05D006994 2.8e-19 99.8 93 55.9
Mapoly0043s0066 Marchantia polymorpha HOM05D005596 ORTHO05D006994 1.4e-18 97.4 96 50.0
ATR0757G105 Amborella trichopoda HOM05D005596 ORTHO05D006994 1.7e-16 90.5 111 45.9
AagrBONN_evm.TU.Sc2ySwM_344.2862 Anthoceros agrestis HOM05D005596 ORTHO05D006994 2.9e-16 89.7 100 45.0
Pp3c25_14680 Physcomitrium patens HOM05D005596 ORTHO05D006994 1.5e-15 87.4 103 41.7
CBR_g7940 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-15 86.7 96 44.8
SMO367G0553 Selaginella moellendorffii HOM05D005596 ORTHO05D006994 5.5e-15 85.5 102 40.2
Cre16.g677800 Chlamydomonas reinhardtii HOM05D005596 ORTHO05D006994 2.7e-14 83.2 115 40.9
SMO343G0141 Selaginella moellendorffii HOM05D005596 ORTHO05D006994 5.9e-09 65.5 80 41.2


User provided reference genes

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